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The map label for this gene is ribC [H]

Identifier: 28199618

GI number: 28199618

Start: 2032423

End: 2033025

Strand: Reverse

Name: ribC [H]

Synonym: PD1746

Alternate gene names: 28199618

Gene position: 2033025-2032423 (Counterclockwise)

Preceding gene: 28199619

Following gene: 28199617

Centisome position: 80.68

GC content: 55.56

Gene sequence:

>603_bases
ATGTTCACGGGCATTATTGGTGGGGTGGGCCGTCTTGCTGCGCGCGTGCGGCAGGGAGGCGATGTGCGTTTTACGTTCGA
GGTCGGCACACTACCGTTCTCCGAGGTCAGTTACGGAGAAAGCATTGCTGTGAATGGTGTTTGTTTAACGGTGACCGCAT
TCGACGCGCTGTGCTTTCAAGCAGATGCCTCCACTGAGACGCTTGCTCTGACCACCCTTGGTCAGTTACCTGAAGGGGCG
ACGCTTAACTTAGAGCGGGCGATGTGCCCGACCGATCGCTTAGGTGGTCACTTGGTCAGTGGTCATGTCGATGGCATTGG
TCGGGTCTTGTCGGTTCACGAGGACGCACGTGCGCAGCGTTGGAGTTTCGCTGCTCCGGTACCGTTGCTGAAGTATGTGG
CTAAAAAGGGTTCGATCTGTGTCGATGGGGTCAGTTTGACCGTCAATGCGGTGAATGCGAAAGGGTTCGAGGTGGCGTTG
ATTCCGCACACGGTGGCGCATACCCGGTTTTCTCGTACGGTGATCGGTGAGGCAGTGAATCTGGAGATTGATTTAATTGC
ACGCTACGTCGAACGTTTGTTGGTGACGGGGAACAAGCAATGA

Upstream 100 bases:

>100_bases
TGTAAATGCAAATTCTTTTTGAAGTTGTTCATTGTCTTCGTGATCCAGCATCGCGGTGCATTGTTACGGTCGTGCAGATG
GAACGCCGGGAGCAGTCTTG

Downstream 100 bases:

>100_bases
ATTCTTTTGCGGCGGTTCCGGTGTTGATTGAGGAGATTCGTGCTGGTCGCATGGTGGTGATTGTTGATGATGAGGATCGT
GAAAATGAGGGCGATCTCAT

Product: riboflavin synthase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MFTGIIGGVGRLAARVRQGGDVRFTFEVGTLPFSEVSYGESIAVNGVCLTVTAFDALCFQADASTETLALTTLGQLPEGA
TLNLERAMCPTDRLGGHLVSGHVDGIGRVLSVHEDARAQRWSFAAPVPLLKYVAKKGSICVDGVSLTVNAVNAKGFEVAL
IPHTVAHTRFSRTVIGEAVNLEIDLIARYVERLLVTGNKQ

Sequences:

>Translated_200_residues
MFTGIIGGVGRLAARVRQGGDVRFTFEVGTLPFSEVSYGESIAVNGVCLTVTAFDALCFQADASTETLALTTLGQLPEGA
TLNLERAMCPTDRLGGHLVSGHVDGIGRVLSVHEDARAQRWSFAAPVPLLKYVAKKGSICVDGVSLTVNAVNAKGFEVAL
IPHTVAHTRFSRTVIGEAVNLEIDLIARYVERLLVTGNKQ
>Mature_200_residues
MFTGIIGGVGRLAARVRQGGDVRFTFEVGTLPFSEVSYGESIAVNGVCLTVTAFDALCFQADASTETLALTTLGQLPEGA
TLNLERAMCPTDRLGGHLVSGHVDGIGRVLSVHEDARAQRWSFAAPVPLLKYVAKKGSICVDGVSLTVNAVNAKGFEVAL
IPHTVAHTRFSRTVIGEAVNLEIDLIARYVERLLVTGNKQ

Specific function: Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The alpha subunit catalyze

COG id: COG0307

COG function: function code H; Riboflavin synthase alpha chain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 lumazine-binding repeats [H]

Homologues:

Organism=Escherichia coli, GI1787952, Length=200, Percent_Identity=37, Blast_Score=110, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6319733, Length=206, Percent_Identity=33.9805825242718, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001783
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00677 Lum_binding [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 21253; Mature: 21253

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTGIIGGVGRLAARVRQGGDVRFTFEVGTLPFSEVSYGESIAVNGVCLTVTAFDALCFQ
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCCCCCEEEECCEEEEEEEHHHHHEE
ADASTETLALTTLGQLPEGATLNLERAMCPTDRLGGHLVSGHVDGIGRVLSVHEDARAQR
CCCCCCEEEEEECCCCCCCCEEEEHHHCCCCHHCCCEEEECCCCCHHHHEECCCHHHHHC
WSFAAPVPLLKYVAKKGSICVDGVSLTVNAVNAKGFEVALIPHTVAHTRFSRTVIGEAVN
CCCCCCHHHHHHHHCCCCEEEECEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCEEE
LEIDLIARYVERLLVTGNKQ
EHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFTGIIGGVGRLAARVRQGGDVRFTFEVGTLPFSEVSYGESIAVNGVCLTVTAFDALCFQ
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCCCCCEEEECCEEEEEEEHHHHHEE
ADASTETLALTTLGQLPEGATLNLERAMCPTDRLGGHLVSGHVDGIGRVLSVHEDARAQR
CCCCCCEEEEEECCCCCCCCEEEEHHHCCCCHHCCCEEEECCCCCHHHHEECCCHHHHHC
WSFAAPVPLLKYVAKKGSICVDGVSLTVNAVNAKGFEVALIPHTVAHTRFSRTVIGEAVN
CCCCCCHHHHHHHHCCCCEEEECEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCEEE
LEIDLIARYVERLLVTGNKQ
EHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339274 [H]