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The map label for this gene is pilO

Identifier: 28199568

GI number: 28199568

Start: 1969006

End: 1969674

Strand: Reverse

Name: pilO

Synonym: PD1693

Alternate gene names: NA

Gene position: 1969674-1969006 (Counterclockwise)

Preceding gene: 28199569

Following gene: 28199567

Centisome position: 78.17

GC content: 46.19

Gene sequence:

>669_bases
ATGAGTAAGAATTCGTTTAAATTGAGTGACCTAGATTTTAATAATATTGGTGCATGGCCACAGAAGGTCAAGATGGTTTT
CTGCGTCTTGGTCGGCTTTTTTATTGTCATCATGGCTTGGTTCCTCGTCATTAGCGGTGAGCGTGAGAAACTTGGTGTGC
TTGAAGGCAAAGAGCGCGAGCTGCGTTCGGAATTCCAAAAGCAGCAGGAACGTGCTGTGAACCTGCAGCCATTAAAGCAG
CAGTTGGCGCAGATGGAAGAGGTGCTGAAGCAGATGTTACGGCAGTTGCCTAGTAAGACCGAAATGCCCGATCTGATTGT
TGATATCTCTCAGACTGCCTTATCTAGTGGTTTGGTGAATGAGCTATTTCAACCAGGGGATGAAGTTCTTCAGGAGTTTT
ACGCCGAGAAGCCGATTTCTTTACGTATGGTTGGGAGCTATCACCAGTTTGCTGCTTTTGTCAGTGGTGTGGCTTCTTTA
CCGCGCGTAGTGATTTTGACTATGCATGATATGAGTCTCAAACCGAAAACCAATAGGAACAATGTGTCTACGCGAGGTTT
GCTTGAATTGTCTGGCACAGTGAAGACCTACCGCTACCTGGATGACCAGGAAATAGCTAATAAGGAGAATCGTACTGCTG
ATGCTGCGAGCAAGAAGGATGGACCATGA

Upstream 100 bases:

>100_bases
AGTCGCCAGATAAGGCTCGTCATAGGCCCATATCTCCTAATTCTGGGAAAGCCTCTGCGTCGTCGTCTGCTGATTTTAAG
CCGCTGTCAGAGGACAATTG

Downstream 100 bases:

>100_bases
GTACAAAAACCCTCAAAAAAATAGTCGGTTTGATTGTTCTCTTGGTATTAGTCGGTTGCATGCGTAGTGTAACCACCTCG
TTTGGCGATGCACCAGATTT

Product: fimbrial assembly membrane protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Membrane Protein; Type IV Pilus Assembly Protein PilO; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Type IV Fimbrial Biogenesis Protein PilO; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Fimbrial Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein; Pilus Assembly Protein PilO-Like

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSKNSFKLSDLDFNNIGAWPQKVKMVFCVLVGFFIVIMAWFLVISGEREKLGVLEGKERELRSEFQKQQERAVNLQPLKQ
QLAQMEEVLKQMLRQLPSKTEMPDLIVDISQTALSSGLVNELFQPGDEVLQEFYAEKPISLRMVGSYHQFAAFVSGVASL
PRVVILTMHDMSLKPKTNRNNVSTRGLLELSGTVKTYRYLDDQEIANKENRTADAASKKDGP

Sequences:

>Translated_222_residues
MSKNSFKLSDLDFNNIGAWPQKVKMVFCVLVGFFIVIMAWFLVISGEREKLGVLEGKERELRSEFQKQQERAVNLQPLKQ
QLAQMEEVLKQMLRQLPSKTEMPDLIVDISQTALSSGLVNELFQPGDEVLQEFYAEKPISLRMVGSYHQFAAFVSGVASL
PRVVILTMHDMSLKPKTNRNNVSTRGLLELSGTVKTYRYLDDQEIANKENRTADAASKKDGP
>Mature_221_residues
SKNSFKLSDLDFNNIGAWPQKVKMVFCVLVGFFIVIMAWFLVISGEREKLGVLEGKERELRSEFQKQQERAVNLQPLKQQ
LAQMEEVLKQMLRQLPSKTEMPDLIVDISQTALSSGLVNELFQPGDEVLQEFYAEKPISLRMVGSYHQFAAFVSGVASLP
RVVILTMHDMSLKPKTNRNNVSTRGLLELSGTVKTYRYLDDQEIANKENRTADAASKKDGP

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25142; Mature: 25011

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNSFKLSDLDFNNIGAWPQKVKMVFCVLVGFFIVIMAWFLVISGEREKLGVLEGKERE
CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHH
LRSEFQKQQERAVNLQPLKQQLAQMEEVLKQMLRQLPSKTEMPDLIVDISQTALSSGLVN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ELFQPGDEVLQEFYAEKPISLRMVGSYHQFAAFVSGVASLPRVVILTMHDMSLKPKTNRN
HHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
NVSTRGLLELSGTVKTYRYLDDQEIANKENRTADAASKKDGP
CCCCCHHHHHHCHHHHHHHCCHHHHHCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SKNSFKLSDLDFNNIGAWPQKVKMVFCVLVGFFIVIMAWFLVISGEREKLGVLEGKERE
CCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHH
LRSEFQKQQERAVNLQPLKQQLAQMEEVLKQMLRQLPSKTEMPDLIVDISQTALSSGLVN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ELFQPGDEVLQEFYAEKPISLRMVGSYHQFAAFVSGVASLPRVVILTMHDMSLKPKTNRN
HHHCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
NVSTRGLLELSGTVKTYRYLDDQEIANKENRTADAASKKDGP
CCCCCHHHHHHCHHHHHHHCCHHHHHCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA