| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199513
Identifier: 28199513
GI number: 28199513
Start: 1894470
End: 1894820
Strand: Reverse
Name: 28199513
Synonym: PD1636
Alternate gene names: NA
Gene position: 1894820-1894470 (Counterclockwise)
Preceding gene: 28199517
Following gene: 28199512
Centisome position: 75.2
GC content: 54.13
Gene sequence:
>351_bases TTGCTTGCCAGCATCAGTGTCAGTGCCGGCACATTGTATAAATGGAAGGATGCCAATGGGGTTTCCCATTATTCGGGGAC TCCCCCGCAACGGGCGCAATCTTTCGAGACCATCAGTGTGAGTCATCATGGTGAGTCAGCGGTTAGCAGCCAAACGGCTT CAGTGGAGAGTCCAGCCTGTGTTAACGCGCGTAAAAATCTGGAGTTGCTCAGCGGTAGTGGTAAGTTGATGGTGGATTCG AACGGTGATGGCAAGCCAGATACTCCGCTGGATGAAGCGCAACGTGTGGCTCAGAAAGCTCTGGCCGAGGCTGCGATTAA GGCTAATTGCTCCGCCACACCGCCACACTGA
Upstream 100 bases:
>100_bases TGAAGATTTGCCAGTGATGCTTGCAAGTGTTGCAATCACACCCCCACCCCAGATGTTAATGGAGACCGAGGGAATGAAAC GAATTGTTGTCTGTTGTTTA
Downstream 100 bases:
>100_bases GTATTTCTTCAATGTGGCTTGATTTGCCTGCTGCTTAGGAATCGCTGGCAGAATACGGGGTTTATTTTCCTTGGGGAGCT TCCAATGCGTTTGTCTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLASISVSAGTLYKWKDANGVSHYSGTPPQRAQSFETISVSHHGESAVSSQTASVESPACVNARKNLELLSGSGKLMVDS NGDGKPDTPLDEAQRVAQKALAEAAIKANCSATPPH
Sequences:
>Translated_116_residues MLASISVSAGTLYKWKDANGVSHYSGTPPQRAQSFETISVSHHGESAVSSQTASVESPACVNARKNLELLSGSGKLMVDS NGDGKPDTPLDEAQRVAQKALAEAAIKANCSATPPH >Mature_116_residues MLASISVSAGTLYKWKDANGVSHYSGTPPQRAQSFETISVSHHGESAVSSQTASVESPACVNARKNLELLSGSGKLMVDS NGDGKPDTPLDEAQRVAQKALAEAAIKANCSATPPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12020; Mature: 12020
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASISVSAGTLYKWKDANGVSHYSGTPPQRAQSFETISVSHHGESAVSSQTASVESPAC CCCEECCCCCEEEEECCCCCCCCCCCCCCHHHCCCEEEEECCCCCCHHCCCCCCCCCCCC VNARKNLELLSGSGKLMVDSNGDGKPDTPLDEAQRVAQKALAEAAIKANCSATPPH CCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLASISVSAGTLYKWKDANGVSHYSGTPPQRAQSFETISVSHHGESAVSSQTASVESPAC CCCEECCCCCEEEEECCCCCCCCCCCCCCHHHCCCEEEEECCCCCCHHCCCCCCCCCCCC VNARKNLELLSGSGKLMVDSNGDGKPDTPLDEAQRVAQKALAEAAIKANCSATPPH CCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA