| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199505
Identifier: 28199505
GI number: 28199505
Start: 1886156
End: 1886428
Strand: Reverse
Name: 28199505
Synonym: PD1628
Alternate gene names: NA
Gene position: 1886428-1886156 (Counterclockwise)
Preceding gene: 28199506
Following gene: 28199504
Centisome position: 74.86
GC content: 47.62
Gene sequence:
>273_bases GTGGTTTCCTGTCATTTCTGTTTTGTGCGAGGGCAGCGGCAACTAGGAGCGTTCCATTCCATCGTTTTTAACTACATCCG TGTTTTTATGTATGACCTGTTTGTCGCCTTGAGTCTTGTTGCTGTTTTGGAAGGCTTGTTCTTGTTTCTTGCGCCTGCTT TATGGAAACGCTTGGCCACGCAGTTGTTGGATCTGCCTTTGGCTCAATTGCGACTGTCGGGCATGTTCGTACTTGGTGTC GGGTTACTTGTGTTGTGGTGGTTACGTCACTAA
Upstream 100 bases:
>100_bases CTTGAAGTACTTTAAGAGCGATCATTGAGCGGTGCTTGTTCTGGTGTTGCAGCGATGCCTTCGCGTATCTGAAAGACAGA CTGTCAAGCGATGATAGGTG
Downstream 100 bases:
>100_bases ACGGTGGCGTTAGTGGAGTGTATTAGGCGCCAGCATCCTGGGGTGGCGTATCCGCAACCCGGATAATGCATCAGTCACGG CGAAGATTGTTTTCCAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MVSCHFCFVRGQRQLGAFHSIVFNYIRVFMYDLFVALSLVAVLEGLFLFLAPALWKRLATQLLDLPLAQLRLSGMFVLGV GLLVLWWLRH
Sequences:
>Translated_90_residues MVSCHFCFVRGQRQLGAFHSIVFNYIRVFMYDLFVALSLVAVLEGLFLFLAPALWKRLATQLLDLPLAQLRLSGMFVLGV GLLVLWWLRH >Mature_90_residues MVSCHFCFVRGQRQLGAFHSIVFNYIRVFMYDLFVALSLVAVLEGLFLFLAPALWKRLATQLLDLPLAQLRLSGMFVLGV GLLVLWWLRH
Specific function: Unknown
COG id: COG3242
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10368; Mature: 10368
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSCHFCFVRGQRQLGAFHSIVFNYIRVFMYDLFVALSLVAVLEGLFLFLAPALWKRLAT CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLDLPLAQLRLSGMFVLGVGLLVLWWLRH HHHHCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MVSCHFCFVRGQRQLGAFHSIVFNYIRVFMYDLFVALSLVAVLEGLFLFLAPALWKRLAT CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLDLPLAQLRLSGMFVLGVGLLVLWWLRH HHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA