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The map label for this gene is 28199229

Identifier: 28199229

GI number: 28199229

Start: 1569108

End: 1569569

Strand: Reverse

Name: 28199229

Synonym: PD1345

Alternate gene names: NA

Gene position: 1569569-1569108 (Counterclockwise)

Preceding gene: 28199230

Following gene: 28199228

Centisome position: 62.29

GC content: 59.31

Gene sequence:

>462_bases
ATGAGCAAGGCGATGCCTATGGCTGCCTGCGCCATGGCAGGAGTGAAGCAGATGCAATCTTTAACATTGCCGTGGCCCTC
CAAGGACCTGTCACCGAACGCACGGGTGCATTGGACACGGCGCAGCAAAGCCGTAAAACAGGCCAGAGGCTACGCCGAGG
TGATGGCACGGCGTGCCGGATGGAGTGGCCTGTCACTGCCTGTTGAGGGGCGTCTGGATTTATGGATTAGCTTCTATCCG
CCCACACGCTGTCTGCCTGACGATGACAACATGCTGGCGCGGTTTAAGCCGTACCGGGATGGCATTGCCGATGCCCTGGG
CATTGATGACCGGCGTTTTGTATCGCATCCGTTGATTGAGGATGAGGTACGCCACGCCGGACAGGTGGTCATCACCATCA
CGGGCATCACGCAGCAAGCAAGCAACGGAGGGCCACGCCTGCACGCCCATCCTGCATTCTGA

Upstream 100 bases:

>100_bases
TGTTTCATCACCCTGAGCTGGCCGCCCGTGAGGAAAAGCTCATGGCCGAATTCCACATCAGCCGGAATCAGGCGCATGAG
CTGATTGAATCGGGGGTGGT

Downstream 100 bases:

>100_bases
TCCTCCCCATCCGTGGTGATGGCCGTGTGACCAACGTTTATTCAGGTGATGCCTACCTGAGCGCTATGAAGCGCCTGGTG
ACTGCTTCTGGTCACCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSKAMPMAACAMAGVKQMQSLTLPWPSKDLSPNARVHWTRRSKAVKQARGYAEVMARRAGWSGLSLPVEGRLDLWISFYP
PTRCLPDDDNMLARFKPYRDGIADALGIDDRRFVSHPLIEDEVRHAGQVVITITGITQQASNGGPRLHAHPAF

Sequences:

>Translated_153_residues
MSKAMPMAACAMAGVKQMQSLTLPWPSKDLSPNARVHWTRRSKAVKQARGYAEVMARRAGWSGLSLPVEGRLDLWISFYP
PTRCLPDDDNMLARFKPYRDGIADALGIDDRRFVSHPLIEDEVRHAGQVVITITGITQQASNGGPRLHAHPAF
>Mature_152_residues
SKAMPMAACAMAGVKQMQSLTLPWPSKDLSPNARVHWTRRSKAVKQARGYAEVMARRAGWSGLSLPVEGRLDLWISFYPP
TRCLPDDDNMLARFKPYRDGIADALGIDDRRFVSHPLIEDEVRHAGQVVITITGITQQASNGGPRLHAHPAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rusA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1345_XYLFT (Q87BV3)

Other databases:

- EMBL:   AE009442
- RefSeq:   NP_779543.1
- ProteinModelPortal:   Q87BV3
- STRING:   Q87BV3
- GeneID:   1144067
- GenomeReviews:   AE009442_GR
- KEGG:   xft:PD1345
- eggNOG:   NOG145986
- HOGENOM:   HBG755971
- OMA:   WTRRSKA
- ProtClustDB:   CLSK557170
- BioCyc:   XFAS183190:PD_1345-MONOMER
- InterPro:   IPR008822
- Gene3D:   G3DSA:3.30.1330.70

Pfam domain/function: PF05866 RusA; SSF103084 RusA-like

EC number: NA

Molecular weight: Translated: 16978; Mature: 16847

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAMPMAACAMAGVKQMQSLTLPWPSKDLSPNARVHWTRRSKAVKQARGYAEVMARRAG
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHCC
WSGLSLPVEGRLDLWISFYPPTRCLPDDDNMLARFKPYRDGIADALGIDDRRFVSHPLIE
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHCCCCH
DEVRHAGQVVITITGITQQASNGGPRLHAHPAF
HHHHCCCEEEEEEECCEECCCCCCCEEECCCCC
>Mature Secondary Structure 
SKAMPMAACAMAGVKQMQSLTLPWPSKDLSPNARVHWTRRSKAVKQARGYAEVMARRAG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHCC
WSGLSLPVEGRLDLWISFYPPTRCLPDDDNMLARFKPYRDGIADALGIDDRRFVSHPLIE
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHCCCCH
DEVRHAGQVVITITGITQQASNGGPRLHAHPAF
HHHHCCCEEEEEEECCEECCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12533478