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The map label for this gene is 28199187

Identifier: 28199187

GI number: 28199187

Start: 1525132

End: 1527093

Strand: Reverse

Name: 28199187

Synonym: PD1301

Alternate gene names: NA

Gene position: 1527093-1525132 (Counterclockwise)

Preceding gene: 28199191

Following gene: 77747686

Centisome position: 60.6

GC content: 55.35

Gene sequence:

>1962_bases
ATGAATAACGATATTTCTCCCCGTCAACTTACCTTCCGTGCTGTGGTGCTCGCGGTTGTGTTGGCGGTTGTGCTGTCTGC
GGCTAACGCGTATCTGGGGTTGTTTGCCGGTTTGACCATTGCGACAGCAATCCCGGCGGCGGTGGTATCGATGGGGGTGC
TGCGTGTATTGGGTGGCAGTTCGATCTTGGAAAACAATATTGTCCAGACCGGCGCTTCGGCTGGTTCGTCGGTTGCTGCT
GGGGTGATCTTCACTATTCCGGCGTTGGTCATCATGGGGTACTGGCCGGACTTTAAATACTGGTGGGTGCTTGGTATTGC
GGGTCTGGGTGGTTTGCTGGGTGTGCTGTTTTCGGTGCCATTACGGCGTTCGATGATTGTCGAGGAGCCGCTGCCGTTCC
CTGAAGGCAAGGCCGCGGCCGAGGTGTTGAAGGCGGGTGAGAATCCTGGGCCAGGGCTTAAAATTTTGGCGCTGTCTGGC
GGGATAGGTGCTTTAGTGAAGTTAGCTGCTGCCAGTGGTTTGAAGTTGATTCCAGATACTTGGTCGCAGGCGGCCTATCT
GGGGAGCAGCAAGGTGGTGGGGTATATCGGTACCAATTTGTCGCCTGCACTGCTGGGGGTTGGTTACATTGTGGGTCTGA
ATGTGGGGATTGTGGTGTTGTCAGGTTCAATTCTGTCTTGGCATGTGGCCATTCCGCTCTATCAGCAGTTTTTCATGGGG
AGTGATCCGGAGTTGGCACAGCGTCTGGCGACGGTGACGGCTGCCGAAGCGGCGTTTAGTGTCTGGGGGGAAAAGATCCG
TTATCTCGGTGTGGGTACGATGCTGATTGGCGGTGTATGGACGCTGTTTTCACTGCGTAAGTCGTTGCTGAGGGGGATTA
AAAGCGGTTTTGCTGCGGCGCGTAAGGGGGGCGGTCAGGTGGTGTCACATACCGAGCGCGATTTGCCGATGACGTGGATG
TTGGTGGCGCTGGCGGTGTTTACGTTGCCGTTGCTGCTGTTGTATCAGTCGATCGTGCAGCAATGGCAGGTGTCGGTGCC
GATGACGATGATTATGATCGTGGCTGGTTTTTTGTTTGTGTCGGTATCGGGATATTTGGCTGGCATGGTGGGTTCTTCTA
ATAATCCAGTGTCTGGTATCACGATTTCTACGATCTTGTTTGCTTCTGCGGTATTGGTCTTGCTGCTGGGCCGCAATGGG
TTGGTGCCGATCGGGAGTGGTGGTGCGCCGTTGGGTGCCGTGGCTGCGATTATGATTGGTGCGGTGGTGTGCTGTGCGGC
AGCGGTGGGCGGAGATAATTTGCAGGATCTCAAGGCAGGTTATTTGGTGGGTGCTACGCCGTGGAAGCAACAGGTGATGA
TGGGGATTGGCACGTTCTCGTGTGCTCTGATCATGGCACCGGTGCTGAATTTGTTGGCACATGCGTATGGGATTGGTCCA
GCGACACCGCAGCATCCGAATGCGCTGAGTGCTCCGCAGGCAACGTTGATGGCGTCGGTGGCGCGTGGTCTGTTTGGCGG
CCAGTTACCATGGACGATGATTGGGGCGGGTGTGTTGATTGGCGCTTTCATCATTGGGATTGATGAGTGGCTCAAGGTGC
GTGGTGCACGTTTCCGTGTTCCGGTGCTGGCCGCAGCGATTGGTATCTATTTGCCGTTGGAGTTGATGGTGCCAATTTTC
TTGGGGGGTGTGTTGTCATATGGTGTGGAGCGTGCTCACAAGGTGCGTCGCGGTGATGAGGCTGAGCGTGACCGTTTGCA
TCGTCCCGGAGTGCTGTTTTCTGCGGGTTTGATTACAGGGGAGGCACTGATGGGGATTTTGATTGCAGTACCAATCGTGA
TTTCTGGTCATCCTGATGTGCTGGCATTACCTGAGGCTTTCCAGTGCAATCAGTGGTTTGGGTTGGCGGTATTGGCGTTT
GTGGGATGGCTGTTGTATCGGGTGAGTAAGCGTCGTGTGTAG

Upstream 100 bases:

>100_bases
ATCGTTGTGTTGGATGTTTTCCAAGATGAGTGTATGGCTGGACTTGCTGGGGCTGAAGCGCTAGCGTGGCTCGGTTTTTT
GCGGATTACGTGGGTTTTGG

Downstream 100 bases:

>100_bases
GTGCAGTGCTCTGTTGGTTGTGATGTTTGAAGTATTTAGGTGTGTGCAGTGGAACAGAAGGTACTTTTGTTGAAATACAA
CCGCGTTCTGTACTGCACTA

Product: oligopeptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MNNDISPRQLTFRAVVLAVVLAVVLSAANAYLGLFAGLTIATAIPAAVVSMGVLRVLGGSSILENNIVQTGASAGSSVAA
GVIFTIPALVIMGYWPDFKYWWVLGIAGLGGLLGVLFSVPLRRSMIVEEPLPFPEGKAAAEVLKAGENPGPGLKILALSG
GIGALVKLAAASGLKLIPDTWSQAAYLGSSKVVGYIGTNLSPALLGVGYIVGLNVGIVVLSGSILSWHVAIPLYQQFFMG
SDPELAQRLATVTAAEAAFSVWGEKIRYLGVGTMLIGGVWTLFSLRKSLLRGIKSGFAAARKGGGQVVSHTERDLPMTWM
LVALAVFTLPLLLLYQSIVQQWQVSVPMTMIMIVAGFLFVSVSGYLAGMVGSSNNPVSGITISTILFASAVLVLLLGRNG
LVPIGSGGAPLGAVAAIMIGAVVCCAAAVGGDNLQDLKAGYLVGATPWKQQVMMGIGTFSCALIMAPVLNLLAHAYGIGP
ATPQHPNALSAPQATLMASVARGLFGGQLPWTMIGAGVLIGAFIIGIDEWLKVRGARFRVPVLAAAIGIYLPLELMVPIF
LGGVLSYGVERAHKVRRGDEAERDRLHRPGVLFSAGLITGEALMGILIAVPIVISGHPDVLALPEAFQCNQWFGLAVLAF
VGWLLYRVSKRRV

Sequences:

>Translated_653_residues
MNNDISPRQLTFRAVVLAVVLAVVLSAANAYLGLFAGLTIATAIPAAVVSMGVLRVLGGSSILENNIVQTGASAGSSVAA
GVIFTIPALVIMGYWPDFKYWWVLGIAGLGGLLGVLFSVPLRRSMIVEEPLPFPEGKAAAEVLKAGENPGPGLKILALSG
GIGALVKLAAASGLKLIPDTWSQAAYLGSSKVVGYIGTNLSPALLGVGYIVGLNVGIVVLSGSILSWHVAIPLYQQFFMG
SDPELAQRLATVTAAEAAFSVWGEKIRYLGVGTMLIGGVWTLFSLRKSLLRGIKSGFAAARKGGGQVVSHTERDLPMTWM
LVALAVFTLPLLLLYQSIVQQWQVSVPMTMIMIVAGFLFVSVSGYLAGMVGSSNNPVSGITISTILFASAVLVLLLGRNG
LVPIGSGGAPLGAVAAIMIGAVVCCAAAVGGDNLQDLKAGYLVGATPWKQQVMMGIGTFSCALIMAPVLNLLAHAYGIGP
ATPQHPNALSAPQATLMASVARGLFGGQLPWTMIGAGVLIGAFIIGIDEWLKVRGARFRVPVLAAAIGIYLPLELMVPIF
LGGVLSYGVERAHKVRRGDEAERDRLHRPGVLFSAGLITGEALMGILIAVPIVISGHPDVLALPEAFQCNQWFGLAVLAF
VGWLLYRVSKRRV
>Mature_653_residues
MNNDISPRQLTFRAVVLAVVLAVVLSAANAYLGLFAGLTIATAIPAAVVSMGVLRVLGGSSILENNIVQTGASAGSSVAA
GVIFTIPALVIMGYWPDFKYWWVLGIAGLGGLLGVLFSVPLRRSMIVEEPLPFPEGKAAAEVLKAGENPGPGLKILALSG
GIGALVKLAAASGLKLIPDTWSQAAYLGSSKVVGYIGTNLSPALLGVGYIVGLNVGIVVLSGSILSWHVAIPLYQQFFMG
SDPELAQRLATVTAAEAAFSVWGEKIRYLGVGTMLIGGVWTLFSLRKSLLRGIKSGFAAARKGGGQVVSHTERDLPMTWM
LVALAVFTLPLLLLYQSIVQQWQVSVPMTMIMIVAGFLFVSVSGYLAGMVGSSNNPVSGITISTILFASAVLVLLLGRNG
LVPIGSGGAPLGAVAAIMIGAVVCCAAAVGGDNLQDLKAGYLVGATPWKQQVMMGIGTFSCALIMAPVLNLLAHAYGIGP
ATPQHPNALSAPQATLMASVARGLFGGQLPWTMIGAGVLIGAFIIGIDEWLKVRGARFRVPVLAAAIGIYLPLELMVPIF
LGGVLSYGVERAHKVRRGDEAERDRLHRPGVLFSAGLITGEALMGILIAVPIVISGHPDVLALPEAFQCNQWFGLAVLAF
VGWLLYRVSKRRV

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 68072; Mature: 68072

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDISPRQLTFRAVVLAVVLAVVLSAANAYLGLFAGLTIATAIPAAVVSMGVLRVLGGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SILENNIVQTGASAGSSVAAGVIFTIPALVIMGYWPDFKYWWVLGIAGLGGLLGVLFSVP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRRSMIVEEPLPFPEGKAAAEVLKAGENPGPGLKILALSGGIGALVKLAAASGLKLIPDT
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEECCCC
WSQAAYLGSSKVVGYIGTNLSPALLGVGYIVGLNVGIVVLSGSILSWHVAIPLYQQFFMG
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHEEEHHHHHHHHHHCC
SDPELAQRLATVTAAEAAFSVWGEKIRYLGVGTMLIGGVWTLFSLRKSLLRGIKSGFAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKGGGQVVSHTERDLPMTWMLVALAVFTLPLLLLYQSIVQQWQVSVPMTMIMIVAGFLFV
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SVSGYLAGMVGSSNNPVSGITISTILFASAVLVLLLGRNGLVPIGSGGAPLGAVAAIMIG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHH
AVVCCAAAVGGDNLQDLKAGYLVGATPWKQQVMMGIGTFSCALIMAPVLNLLAHAYGIGP
HHHHHHHHCCCCCHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATPQHPNALSAPQATLMASVARGLFGGQLPWTMIGAGVLIGAFIIGIDEWLKVRGARFRV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PVLAAAIGIYLPLELMVPIFLGGVLSYGVERAHKVRRGDEAERDRLHRPGVLFSAGLITG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEHHHHHH
EALMGILIAVPIVISGHPDVLALPEAFQCNQWFGLAVLAFVGWLLYRVSKRRV
HHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNDISPRQLTFRAVVLAVVLAVVLSAANAYLGLFAGLTIATAIPAAVVSMGVLRVLGGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SILENNIVQTGASAGSSVAAGVIFTIPALVIMGYWPDFKYWWVLGIAGLGGLLGVLFSVP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRRSMIVEEPLPFPEGKAAAEVLKAGENPGPGLKILALSGGIGALVKLAAASGLKLIPDT
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEECCCC
WSQAAYLGSSKVVGYIGTNLSPALLGVGYIVGLNVGIVVLSGSILSWHVAIPLYQQFFMG
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHEEEHHHHHHHHHHCC
SDPELAQRLATVTAAEAAFSVWGEKIRYLGVGTMLIGGVWTLFSLRKSLLRGIKSGFAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKGGGQVVSHTERDLPMTWMLVALAVFTLPLLLLYQSIVQQWQVSVPMTMIMIVAGFLFV
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SVSGYLAGMVGSSNNPVSGITISTILFASAVLVLLLGRNGLVPIGSGGAPLGAVAAIMIG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHH
AVVCCAAAVGGDNLQDLKAGYLVGATPWKQQVMMGIGTFSCALIMAPVLNLLAHAYGIGP
HHHHHHHHCCCCCHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATPQHPNALSAPQATLMASVARGLFGGQLPWTMIGAGVLIGAFIIGIDEWLKVRGARFRV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PVLAAAIGIYLPLELMVPIFLGGVLSYGVERAHKVRRGDEAERDRLHRPGVLFSAGLITG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEHHHHHH
EALMGILIAVPIVISGHPDVLALPEAFQCNQWFGLAVLAFVGWLLYRVSKRRV
HHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]