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The map label for this gene is yjcH [H]

Identifier: 28199181

GI number: 28199181

Start: 1515302

End: 1515622

Strand: Reverse

Name: yjcH [H]

Synonym: PD1295

Alternate gene names: 28199181

Gene position: 1515622-1515302 (Counterclockwise)

Preceding gene: 77747686

Following gene: 28199180

Centisome position: 60.15

GC content: 41.43

Gene sequence:

>321_bases
ATGAACGTTTCTAATGGCGATTTAATCGTCGAGAAGATTGTTGCTAATCGTAAATATCATGCTTTGAAGCGGCAACGTAA
TGTGCTGAGTTGGTTGCTAACTTTATTGATGCTGGTTGTTTATTTTGGTTTTATCGGTCTCATTGCTTTCAACAAGGCGT
TTCTTGCTGTGCCGCTCGCTAGCGGGGTCACGACACGCGGTATTCCGATTGCAATTGGGGTGATGCTGTTCGCCATTATT
GTTACTGCGGTTTATGTTTTTTTTTCCAACATTGTCTACGACAAATTAAGTCGTAACATTCTTGAGGATGCCTGTAAATG
A

Upstream 100 bases:

>100_bases
GACGCTGATGCATTGTTCTAGGTAGTTTTGAGGCCCCTATGTGCCGGATTATTTCTATGATTTAGGGAGAACCGGCATCA
TTATTTTGGAGAGAGTATGC

Downstream 100 bases:

>100_bases
ACATAGGCAGGCATCTTTTGTTGGTGTTGTTTGGGTGGTTGCCGGTGAGATTGGGGTTTGCTGCAGATGCGATAAGTGTT
GTCGATAAGCAGCCGGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MNVSNGDLIVEKIVANRKYHALKRQRNVLSWLLTLLMLVVYFGFIGLIAFNKAFLAVPLASGVTTRGIPIAIGVMLFAII
VTAVYVFFSNIVYDKLSRNILEDACK

Sequences:

>Translated_106_residues
MNVSNGDLIVEKIVANRKYHALKRQRNVLSWLLTLLMLVVYFGFIGLIAFNKAFLAVPLASGVTTRGIPIAIGVMLFAII
VTAVYVFFSNIVYDKLSRNILEDACK
>Mature_106_residues
MNVSNGDLIVEKIVANRKYHALKRQRNVLSWLLTLLMLVVYFGFIGLIAFNKAFLAVPLASGVTTRGIPIAIGVMLFAII
VTAVYVFFSNIVYDKLSRNILEDACK

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=96, Percent_Identity=35.4166666666667, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 11806; Mature: 11806

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSNGDLIVEKIVANRKYHALKRQRNVLSWLLTLLMLVVYFGFIGLIAFNKAFLAVPLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGVTTRGIPIAIGVMLFAIIVTAVYVFFSNIVYDKLSRNILEDACK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVSNGDLIVEKIVANRKYHALKRQRNVLSWLLTLLMLVVYFGFIGLIAFNKAFLAVPLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGVTTRGIPIAIGVMLFAIIVTAVYVFFSNIVYDKLSRNILEDACK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]