Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is hisI [H]
Identifier: 28199147
GI number: 28199147
Start: 1470917
End: 1471537
Strand: Reverse
Name: hisI [H]
Synonym: PD1261
Alternate gene names: 28199147
Gene position: 1471537-1470917 (Counterclockwise)
Preceding gene: 28199148
Following gene: 28199140
Centisome position: 58.4
GC content: 57.81
Gene sequence:
>621_bases ATGTGTAATGAGCCTGCGACGAGCGATGTTGCATTGCCTGATCTGGATTGGGCCAAGGGTGATGGCTTGTTGCCCGTGAT CGTGCAGGACGCCGATACGCTGCGTGTGCTGATGCTTGGCTATATGAACAGCCAGGCATTAGAGGTCACGCAGCGCAGCC GCTTGGTGACGTTTTACAGCCGCAGTAAGCAGCGTTTATGGACCAAGGGGGAGCGTTCTGGGCATGTGCTGCATCTGGTG GCCATTGATGCCGATTGCGATGCCGATACGTTATTAGTGCAGGCCCGACCCCGTGGACCCACGTGTCATCTGGGCAGGAC CAGTTGTTTTCCTGCAGCCCCTGGACAGTTTCTTGGTGCGCTGGATGCGCTGGTGGCGGAGCGCGAACGTGAGCGGCCAC AAGACAGTTACACCACCGCATTGTTTGAGCAGGGCGTCCGCCGCATCGCGCAGAAGGTCGGTGAGGAAGGGGTGGAGACC GCATTGGCTGGCGTGGTCCAGGCTGATGATGCACTCCTTGATGAATCAGCAGACCTGCTTTACCACCTGATTGTGTTGTT GCGTGCCCGTGGTTTATCGCTTGCCGATGCCGTTACCGTATTAGAGGCACGGCATCGTTAA
Upstream 100 bases:
>100_bases GATGTTGATGGTGCATTGGCGGCCAGCGTATTCCATAGCGGCGCGATTTCGATTCCGGGTTTAAAACAGTTTCTGCGTGA GCAGCAAATTGAGGTCCGCG
Downstream 100 bases:
>100_bases TGCCGATGGCGTGTTGCCCGCAGCGCGGAGTGTTGCCGTGGCTGAGTGCTTGATGTGTCATCTCACTGATGGGTGCCAGC GTTGTTTGGTGAGGGGGGCA
Product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MCNEPATSDVALPDLDWAKGDGLLPVIVQDADTLRVLMLGYMNSQALEVTQRSRLVTFYSRSKQRLWTKGERSGHVLHLV AIDADCDADTLLVQARPRGPTCHLGRTSCFPAAPGQFLGALDALVAERERERPQDSYTTALFEQGVRRIAQKVGEEGVET ALAGVVQADDALLDESADLLYHLIVLLRARGLSLADAVTVLEARHR
Sequences:
>Translated_206_residues MCNEPATSDVALPDLDWAKGDGLLPVIVQDADTLRVLMLGYMNSQALEVTQRSRLVTFYSRSKQRLWTKGERSGHVLHLV AIDADCDADTLLVQARPRGPTCHLGRTSCFPAAPGQFLGALDALVAERERERPQDSYTTALFEQGVRRIAQKVGEEGVET ALAGVVQADDALLDESADLLYHLIVLLRARGLSLADAVTVLEARHR >Mature_206_residues MCNEPATSDVALPDLDWAKGDGLLPVIVQDADTLRVLMLGYMNSQALEVTQRSRLVTFYSRSKQRLWTKGERSGHVLHLV AIDADCDADTLLVQARPRGPTCHLGRTSCFPAAPGQFLGALDALVAERERERPQDSYTTALFEQGVRRIAQKVGEEGVET ALAGVVQADDALLDESADLLYHLIVLLRARGLSLADAVTVLEARHR
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=195, Percent_Identity=56.4102564102564, Blast_Score=216, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6319819, Length=190, Percent_Identity=33.6842105263158, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 22532; Mature: 22532
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNEPATSDVALPDLDWAKGDGLLPVIVQDADTLRVLMLGYMNSQALEVTQRSRLVTFYS CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RSKQRLWTKGERSGHVLHLVAIDADCDADTLLVQARPRGPTCHLGRTSCFPAAPGQFLGA HHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHH LDALVAERERERPQDSYTTALFEQGVRRIAQKVGEEGVETALAGVVQADDALLDESADLL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHH YHLIVLLRARGLSLADAVTVLEARHR HHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MCNEPATSDVALPDLDWAKGDGLLPVIVQDADTLRVLMLGYMNSQALEVTQRSRLVTFYS CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RSKQRLWTKGERSGHVLHLVAIDADCDADTLLVQARPRGPTCHLGRTSCFPAAPGQFLGA HHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHH LDALVAERERERPQDSYTTALFEQGVRRIAQKVGEEGVETALAGVVQADDALLDESADLL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHH YHLIVLLRARGLSLADAVTVLEARHR HHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]