Click here to switch to the map view.

The map label for this gene is 28199069

Identifier: 28199069

GI number: 28199069

Start: 1380483

End: 1381124

Strand: Reverse

Name: 28199069

Synonym: PD1179

Alternate gene names: NA

Gene position: 1381124-1380483 (Counterclockwise)

Preceding gene: 28199070

Following gene: 28199068

Centisome position: 54.81

GC content: 59.81

Gene sequence:

>642_bases
ATGAGTCTGGATGACTGGAATAACGCCTCCCTCAGTGCCGTACTGCAACGCAGTACCGAAGCGCTGGCCCAGCGCCTGCG
TGTGGCCTTGCCTGGGCAGATCGTCCGCTTTAACCCAGTCACCCAAACGGCGACCGTACAGCCGTTGATCCAGCAGAAGA
GGAACGATGGCTCCCTTCAGCCCTTACCGGTACTCCAGGATGTGCCGGTATCCTTCCCGCGGGGCGGCGGCTTTGTGATC
ACCTTCCCCGTGGCTGCTGGGGATGAATGCGAACTCATCTTCCAAGATCGCTGCATGGATGCCTGGTTCCAGTCTGGCCG
TGCGTCCGAGCCTGTGGACTATCGCCTGCATGACCTGTCTGATGCCGTTGCCTGCGTGGGAATTGCTTCCTTACCCAATG
TCATTCCGAGGTTTGAAATGGACGGCGTGGTACTGCGCACCCTGGATGGCCGCGCCTCATTCAAACTGGATACCCAAGGC
GTGATCACGCTGCGCGGCAGCAAACTGGTTCTTGATCTTCCCGTGGAATTCACCCAGGGACTGCGTGGTCATGGCGACGT
CGTATCAAACCGCATCGGCCTGGAGACACACACCCACGACAACGTGGAGAACGGCCCAGGACAGACAGGCCCGGCCCAAT
GA

Upstream 100 bases:

>100_bases
AAATCACCTCACTGCAAGACATGGGCGATGTCATGGCCGAAGCCTGGTTCAGTACGGTGACCTGTGTGGGCGGTGATTTT
CAGAACGTGAGGCCGTCTGT

Downstream 100 bases:

>100_bases
GAGTGCGGCGCTTGGACAGCCAAGGGGATTGGACCTTCGGCAACGGGCGCGGCAACTATGCTGCCGCCAGCGATTGCCTG
GCACAGCGCGTAAAAACACG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Phage Protein

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSLDDWNNASLSAVLQRSTEALAQRLRVALPGQIVRFNPVTQTATVQPLIQQKRNDGSLQPLPVLQDVPVSFPRGGGFVI
TFPVAAGDECELIFQDRCMDAWFQSGRASEPVDYRLHDLSDAVACVGIASLPNVIPRFEMDGVVLRTLDGRASFKLDTQG
VITLRGSKLVLDLPVEFTQGLRGHGDVVSNRIGLETHTHDNVENGPGQTGPAQ

Sequences:

>Translated_213_residues
MSLDDWNNASLSAVLQRSTEALAQRLRVALPGQIVRFNPVTQTATVQPLIQQKRNDGSLQPLPVLQDVPVSFPRGGGFVI
TFPVAAGDECELIFQDRCMDAWFQSGRASEPVDYRLHDLSDAVACVGIASLPNVIPRFEMDGVVLRTLDGRASFKLDTQG
VITLRGSKLVLDLPVEFTQGLRGHGDVVSNRIGLETHTHDNVENGPGQTGPAQ
>Mature_212_residues
SLDDWNNASLSAVLQRSTEALAQRLRVALPGQIVRFNPVTQTATVQPLIQQKRNDGSLQPLPVLQDVPVSFPRGGGFVIT
FPVAAGDECELIFQDRCMDAWFQSGRASEPVDYRLHDLSDAVACVGIASLPNVIPRFEMDGVVLRTLDGRASFKLDTQGV
ITLRGSKLVLDLPVEFTQGLRGHGDVVSNRIGLETHTHDNVENGPGQTGPAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23110; Mature: 22979

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDDWNNASLSAVLQRSTEALAQRLRVALPGQIVRFNPVTQTATVQPLIQQKRNDGSLQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
PLPVLQDVPVSFPRGGGFVITFPVAAGDECELIFQDRCMDAWFQSGRASEPVDYRLHDLS
CCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHH
DAVACVGIASLPNVIPRFEMDGVVLRTLDGRASFKLDTQGVITLRGSKLVLDLPVEFTQG
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCEEEEEECCEEEEEECHHHHCC
LRGHGDVVSNRIGLETHTHDNVENGPGQTGPAQ
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLDDWNNASLSAVLQRSTEALAQRLRVALPGQIVRFNPVTQTATVQPLIQQKRNDGSLQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
PLPVLQDVPVSFPRGGGFVITFPVAAGDECELIFQDRCMDAWFQSGRASEPVDYRLHDLS
CCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHH
DAVACVGIASLPNVIPRFEMDGVVLRTLDGRASFKLDTQGVITLRGSKLVLDLPVEFTQG
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCEEEEEECCEEEEEECHHHHCC
LRGHGDVVSNRIGLETHTHDNVENGPGQTGPAQ
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA