Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28199065

Identifier: 28199065

GI number: 28199065

Start: 1378273

End: 1379418

Strand: Reverse

Name: 28199065

Synonym: PD1175

Alternate gene names: NA

Gene position: 1379418-1378273 (Counterclockwise)

Preceding gene: 28199068

Following gene: 28199064

Centisome position: 54.74

GC content: 56.63

Gene sequence:

>1146_bases
ATGGGAAAAGTCACCACCAGCGGATACGAAGCCGAGCGGCTGGATACGATCATTGCCCGCTTGCAAGAAGGCTTCCGCTC
GATTTACGGCAACGATATCAACGTTGATCCAGACAGCCCCGATGGACAGTTGATTGGCCTGATTGCACAGATAAAAGCCG
ATCTGGAAGAACTGGGCACGGACATCCACCGGCAACTGGACCCCGATTACGCCAGTGGCGCGTGGCTAGAACAACGCGTG
GCCTATGCAGGCCTCACCCGCAGGCGAGCCAGCTACAGCTACTTACGCAATGTCACTTTGACCGGCAAACCCGATGCCTC
GATCCCGGCAGGGTATGTTGTTTCAGATCCCAATCGCTGCCGCTGGCAGCTCGTGTCACCCGTGCGCCTGGATGCCACCG
GCCACGCACATGCAGACTTTCGCAATGATACCTTAGGCCGTTTTGACGTCCCGGCACACACCGCCCTGACCATTGAAACC
GTGGCCCTGGGCTGGGACCGGGCCATCACCACCGAAGACGCCGAGGCAGGGGCAGAAGAAGAGCACGATGCGGCCCTGCG
CGCCCGCTTCTTTAAAAGCCGTGCCAAGACATCCACCAACAATGCTGACAGCATCCAGGCCACGCTCTGGGGGCTACCCG
ACGTGCGCCACGTCGTCTGCTTAGAAAACTTCACCGATACTGTGGATGCTGCGGGAGTCCCCGCCCACGGCATTAACGTC
ATTGTGGAGGGGGGCCGGGATGACGCCATTGCTGAAGTGATCTATCACCATAAAACACTCGGTACAAACATGCGTGGTGA
GGTACGGGTACAGATTAAAAACAAACACGGCCAACCTAGAGAGATCTATTTTGACCGTCCAACGATGGTCCGTTGCGCCG
CCCGCATCGAAGTAGAGCGCGATAGCAGCACTTCCGGTATTGATACCCATGGGATCAAACAGGCATTGGCCGAGCGCTCC
TTTCTGATTGGCGAGCACGTCCACCGCAGCCGACTGTATACCCAAATTAATAGCGTCCCAGGCTTTTGGGTGACATCGCT
GATGATCGGTAAAGCAGGCCAAGCGTTGTCTGAGCAAAATATTCCTATCGACGTGAGAAGCATGGCGCGCTTTGCAATGA
ATGATCTTCAGGTCATTGTGCGATGA

Upstream 100 bases:

>100_bases
ATGTGCAAACTATAGTTTGCATGTCGTTAAGTATCAACCACAGTTGATAATGTAAATGAAATGAACGACCACACCCGCCA
CCTTGGCGATTGAGTAAACC

Downstream 100 bases:

>100_bases
GCTACGCGGACCTGTTGATCTGGCAATACAAGGGCCAACCCAGGGCCACCGCCACCGCTGCATTGATCAGCGATACCTTC
AGCACCACCTGGAACGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Protein; Phage Related-Protein; Phage Mu

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MGKVTTSGYEAERLDTIIARLQEGFRSIYGNDINVDPDSPDGQLIGLIAQIKADLEELGTDIHRQLDPDYASGAWLEQRV
AYAGLTRRRASYSYLRNVTLTGKPDASIPAGYVVSDPNRCRWQLVSPVRLDATGHAHADFRNDTLGRFDVPAHTALTIET
VALGWDRAITTEDAEAGAEEEHDAALRARFFKSRAKTSTNNADSIQATLWGLPDVRHVVCLENFTDTVDAAGVPAHGINV
IVEGGRDDAIAEVIYHHKTLGTNMRGEVRVQIKNKHGQPREIYFDRPTMVRCAARIEVERDSSTSGIDTHGIKQALAERS
FLIGEHVHRSRLYTQINSVPGFWVTSLMIGKAGQALSEQNIPIDVRSMARFAMNDLQVIVR

Sequences:

>Translated_381_residues
MGKVTTSGYEAERLDTIIARLQEGFRSIYGNDINVDPDSPDGQLIGLIAQIKADLEELGTDIHRQLDPDYASGAWLEQRV
AYAGLTRRRASYSYLRNVTLTGKPDASIPAGYVVSDPNRCRWQLVSPVRLDATGHAHADFRNDTLGRFDVPAHTALTIET
VALGWDRAITTEDAEAGAEEEHDAALRARFFKSRAKTSTNNADSIQATLWGLPDVRHVVCLENFTDTVDAAGVPAHGINV
IVEGGRDDAIAEVIYHHKTLGTNMRGEVRVQIKNKHGQPREIYFDRPTMVRCAARIEVERDSSTSGIDTHGIKQALAERS
FLIGEHVHRSRLYTQINSVPGFWVTSLMIGKAGQALSEQNIPIDVRSMARFAMNDLQVIVR
>Mature_380_residues
GKVTTSGYEAERLDTIIARLQEGFRSIYGNDINVDPDSPDGQLIGLIAQIKADLEELGTDIHRQLDPDYASGAWLEQRVA
YAGLTRRRASYSYLRNVTLTGKPDASIPAGYVVSDPNRCRWQLVSPVRLDATGHAHADFRNDTLGRFDVPAHTALTIETV
ALGWDRAITTEDAEAGAEEEHDAALRARFFKSRAKTSTNNADSIQATLWGLPDVRHVVCLENFTDTVDAAGVPAHGINVI
VEGGRDDAIAEVIYHHKTLGTNMRGEVRVQIKNKHGQPREIYFDRPTMVRCAARIEVERDSSTSGIDTHGIKQALAERSF
LIGEHVHRSRLYTQINSVPGFWVTSLMIGKAGQALSEQNIPIDVRSMARFAMNDLQVIVR

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42139; Mature: 42008

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVTTSGYEAERLDTIIARLQEGFRSIYGNDINVDPDSPDGQLIGLIAQIKADLEELGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DIHRQLDPDYASGAWLEQRVAYAGLTRRRASYSYLRNVTLTGKPDASIPAGYVVSDPNRC
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCCC
RWQLVSPVRLDATGHAHADFRNDTLGRFDVPAHTALTIETVALGWDRAITTEDAEAGAEE
EEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHCCCCH
EHDAALRARFFKSRAKTSTNNADSIQATLWGLPDVRHVVCLENFTDTVDAAGVPAHGINV
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHEEHHHCCCHHHCCCCCCCCCEE
IVEGGRDDAIAEVIYHHKTLGTNMRGEVRVQIKNKHGQPREIYFDRPTMVRCAARIEVER
EEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCHHHEEEEEEEEEC
DSSTSGIDTHGIKQALAERSFLIGEHVHRSRLYTQINSVPGFWVTSLMIGKAGQALSEQN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCCC
IPIDVRSMARFAMNDLQVIVR
CCEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKVTTSGYEAERLDTIIARLQEGFRSIYGNDINVDPDSPDGQLIGLIAQIKADLEELGT
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DIHRQLDPDYASGAWLEQRVAYAGLTRRRASYSYLRNVTLTGKPDASIPAGYVVSDPNRC
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCCC
RWQLVSPVRLDATGHAHADFRNDTLGRFDVPAHTALTIETVALGWDRAITTEDAEAGAEE
EEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHCCCCH
EHDAALRARFFKSRAKTSTNNADSIQATLWGLPDVRHVVCLENFTDTVDAAGVPAHGINV
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHEEHHHCCCHHHCCCCCCCCCEE
IVEGGRDDAIAEVIYHHKTLGTNMRGEVRVQIKNKHGQPREIYFDRPTMVRCAARIEVER
EEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCHHHEEEEEEEEEC
DSSTSGIDTHGIKQALAERSFLIGEHVHRSRLYTQINSVPGFWVTSLMIGKAGQALSEQN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCCC
IPIDVRSMARFAMNDLQVIVR
CCEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA