Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is gluP [H]
Identifier: 28199054
GI number: 28199054
Start: 1366425
End: 1367705
Strand: Reverse
Name: gluP [H]
Synonym: PD1164
Alternate gene names: 28199054
Gene position: 1367705-1366425 (Counterclockwise)
Preceding gene: 28199055
Following gene: 28199053
Centisome position: 54.28
GC content: 47.78
Gene sequence:
>1281_bases ATGACTTCTAATAAAACTGTCAGTAACAATGTTGCAATGGCGGTAGCTACCACGATTTTTTTTATGTGGGGATTTTTGAC ATGTCTCAATGATATTTTGATCCCACATTTGAAGGCGGTTTTTGAGCTTAATTTTTCGCAAGCGATGTTAGTGCAGTTCA CGTTCTTTGGTGCTTATTTCTTGATGTCATTGCCTGCTGAGTACGTGGTGGCGCGGCTGGGATATAAGAAAGGTATTGTT GCTGGTTTGTTGATTGCTGCAATCGGTACATTCTGTTTCTGGCCGGCAGCAGAAATGCGTGTGTATGGGTCATTCCTTGG CGCGTTGTTTATATTGGCCACTGGTATCACTGTGTTGCAGGTTGCTGCGAATCCATTTGTTTCTTTGCTAGGTGCCGAGC GTAATGCTTCTGCACGGCTGACATTGGCTCAGGGGTTTAATTCGTTAGGCACTGCAATTGCACCTTTGATCGGCGGCTGG TTTATTCTGTCTGGTACGGTGAAGAGTGCCGATGAGTTGCAGACGTTGTCTGCGGCGGAGCAATTGGCCTACCGGGTTCA AGAAGCGCAATCGGTACAAGGGCCTTATCTTGTGCTGACTTTGGTCCTGGTAGTGTTGGCTGCAATAGTGTTTCTTTTTC GGCTGCCTCACTTAAAGGAATCTACAGAACAAAATGTTCGGGGGCATCATTACACTCTCAGTGACGCATTACGTCATCCG CATGTGATATTTAGTGTATTGGCGATCTTTTGTTATGTCGGTGCGGAAGTAGCCATTGGTAGTTTGATGGTCAGTTACTT CTCAATGCCACACATTGGTGGTTTTAGTGAGCAGCAGGCGACGCACTACGTCAGCATTTACTGGACATTGGCGATGGTGG GCCGTTTCGCTGGTTCTGGGTTGCTGACGTTGTTCCAGCCGCGTAGGTTGTTGGCGTTTTTCGCGCTGATTAATGCGGGG ATACTTGGTGTTAGTGTGGCGACGAGTGGCATAACAGCGGTCTATGCGTTGGTTGCCATTGGTCTATTTAATTCGATCAT GTTTCCAACCATTTTCACTTTGGGTATTGAGCGTCTTGGGCCACTGACCGGACGTGCTTCGAGTCTAATGATTATGGCGA TCGTTGGTGGTGCGGTGGTGCCGTATTTACAGGGTGTGTTAGCCGATCATGTCGGTTTGCAGGTGTCGTTCTTGCTGCCG CTGTTTTGTTATCTCTACATTGTGTTCTATGGAATATGGGGTTCGTGTATCCGCGGTGTACTGACTGAGCGTCTGTCGTG A
Upstream 100 bases:
>100_bases CAGTTGCCGATCGTTGTCGATTTTTGCTATGCAGTGTGTCCACTGTGTTTGTGACGCATGAGCGCTTCCTATCCTTTTCT TCCTGGTTCACTTTTATTCA
Downstream 100 bases:
>100_bases GCGTTGCACTGTCTATTGATCTGTCTAAAAAGAAAACGATTCTTTGTTTTGGTGAAGCATTGATCGATATGTTGGCGCAG CCTCTGGTAAAGAAGGGAAT
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYFLMSLPAEYVVARLGYKKGIV AGLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQVAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGW FILSGTVKSADELQTLSAAEQLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHP HVIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSGLLTLFQPRRLLAFFALINAG ILGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLGPLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLP LFCYLYIVFYGIWGSCIRGVLTERLS
Sequences:
>Translated_426_residues MTSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYFLMSLPAEYVVARLGYKKGIV AGLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQVAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGW FILSGTVKSADELQTLSAAEQLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHP HVIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSGLLTLFQPRRLLAFFALINAG ILGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLGPLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLP LFCYLYIVFYGIWGSCIRGVLTERLS >Mature_425_residues TSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYFLMSLPAEYVVARLGYKKGIVA GLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQVAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGWF ILSGTVKSADELQTLSAAEQLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHPH VIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSGLLTLFQPRRLLAFFALINAGI LGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLGPLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLPL FCYLYIVFYGIWGSCIRGVLTERLS
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=404, Percent_Identity=36.3861386138614, Blast_Score=247, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46051; Mature: 45920
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LMSLPAEYVVARLGYKKGIVAGLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQ HHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGWFILSGTVKSADELQTLSAAE HHHHHHHHHHCCCCCCCCEEEHHHCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH QLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEHHHHHCCH HVIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC LLTLFQPRRLLAFFALINAGILGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLPLFCYLYIVFYGIWGSCIRGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTERLS HHHHCC >Mature Secondary Structure TSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LMSLPAEYVVARLGYKKGIVAGLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQ HHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGWFILSGTVKSADELQTLSAAE HHHHHHHHHHCCCCCCCCEEEHHHCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH QLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEHHHHHCCH HVIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC LLTLFQPRRLLAFFALINAGILGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLPLFCYLYIVFYGIWGSCIRGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTERLS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]