Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

Click here to switch to the map view.

The map label for this gene is gluP [H]

Identifier: 28199054

GI number: 28199054

Start: 1366425

End: 1367705

Strand: Reverse

Name: gluP [H]

Synonym: PD1164

Alternate gene names: 28199054

Gene position: 1367705-1366425 (Counterclockwise)

Preceding gene: 28199055

Following gene: 28199053

Centisome position: 54.28

GC content: 47.78

Gene sequence:

>1281_bases
ATGACTTCTAATAAAACTGTCAGTAACAATGTTGCAATGGCGGTAGCTACCACGATTTTTTTTATGTGGGGATTTTTGAC
ATGTCTCAATGATATTTTGATCCCACATTTGAAGGCGGTTTTTGAGCTTAATTTTTCGCAAGCGATGTTAGTGCAGTTCA
CGTTCTTTGGTGCTTATTTCTTGATGTCATTGCCTGCTGAGTACGTGGTGGCGCGGCTGGGATATAAGAAAGGTATTGTT
GCTGGTTTGTTGATTGCTGCAATCGGTACATTCTGTTTCTGGCCGGCAGCAGAAATGCGTGTGTATGGGTCATTCCTTGG
CGCGTTGTTTATATTGGCCACTGGTATCACTGTGTTGCAGGTTGCTGCGAATCCATTTGTTTCTTTGCTAGGTGCCGAGC
GTAATGCTTCTGCACGGCTGACATTGGCTCAGGGGTTTAATTCGTTAGGCACTGCAATTGCACCTTTGATCGGCGGCTGG
TTTATTCTGTCTGGTACGGTGAAGAGTGCCGATGAGTTGCAGACGTTGTCTGCGGCGGAGCAATTGGCCTACCGGGTTCA
AGAAGCGCAATCGGTACAAGGGCCTTATCTTGTGCTGACTTTGGTCCTGGTAGTGTTGGCTGCAATAGTGTTTCTTTTTC
GGCTGCCTCACTTAAAGGAATCTACAGAACAAAATGTTCGGGGGCATCATTACACTCTCAGTGACGCATTACGTCATCCG
CATGTGATATTTAGTGTATTGGCGATCTTTTGTTATGTCGGTGCGGAAGTAGCCATTGGTAGTTTGATGGTCAGTTACTT
CTCAATGCCACACATTGGTGGTTTTAGTGAGCAGCAGGCGACGCACTACGTCAGCATTTACTGGACATTGGCGATGGTGG
GCCGTTTCGCTGGTTCTGGGTTGCTGACGTTGTTCCAGCCGCGTAGGTTGTTGGCGTTTTTCGCGCTGATTAATGCGGGG
ATACTTGGTGTTAGTGTGGCGACGAGTGGCATAACAGCGGTCTATGCGTTGGTTGCCATTGGTCTATTTAATTCGATCAT
GTTTCCAACCATTTTCACTTTGGGTATTGAGCGTCTTGGGCCACTGACCGGACGTGCTTCGAGTCTAATGATTATGGCGA
TCGTTGGTGGTGCGGTGGTGCCGTATTTACAGGGTGTGTTAGCCGATCATGTCGGTTTGCAGGTGTCGTTCTTGCTGCCG
CTGTTTTGTTATCTCTACATTGTGTTCTATGGAATATGGGGTTCGTGTATCCGCGGTGTACTGACTGAGCGTCTGTCGTG
A

Upstream 100 bases:

>100_bases
CAGTTGCCGATCGTTGTCGATTTTTGCTATGCAGTGTGTCCACTGTGTTTGTGACGCATGAGCGCTTCCTATCCTTTTCT
TCCTGGTTCACTTTTATTCA

Downstream 100 bases:

>100_bases
GCGTTGCACTGTCTATTGATCTGTCTAAAAAGAAAACGATTCTTTGTTTTGGTGAAGCATTGATCGATATGTTGGCGCAG
CCTCTGGTAAAGAAGGGAAT

Product: glucose/galactose transporter

Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYFLMSLPAEYVVARLGYKKGIV
AGLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQVAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGW
FILSGTVKSADELQTLSAAEQLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHP
HVIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSGLLTLFQPRRLLAFFALINAG
ILGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLGPLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLP
LFCYLYIVFYGIWGSCIRGVLTERLS

Sequences:

>Translated_426_residues
MTSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYFLMSLPAEYVVARLGYKKGIV
AGLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQVAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGW
FILSGTVKSADELQTLSAAEQLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHP
HVIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSGLLTLFQPRRLLAFFALINAG
ILGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLGPLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLP
LFCYLYIVFYGIWGSCIRGVLTERLS
>Mature_425_residues
TSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYFLMSLPAEYVVARLGYKKGIVA
GLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQVAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGWF
ILSGTVKSADELQTLSAAEQLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHPH
VIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSGLLTLFQPRRLLAFFALINAGI
LGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLGPLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLPL
FCYLYIVFYGIWGSCIRGVLTERLS

Specific function: Intake of glucose and galactose (Potential) [H]

COG id: COG0738

COG function: function code G; Fucose permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]

Homologues:

Organism=Escherichia coli, GI1789166, Length=404, Percent_Identity=36.3861386138614, Blast_Score=247, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005964
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46051; Mature: 45920

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LMSLPAEYVVARLGYKKGIVAGLLIAAIGTFCFWPAAEMRVYGSFLGALFILATGITVLQ
HHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VAANPFVSLLGAERNASARLTLAQGFNSLGTAIAPLIGGWFILSGTVKSADELQTLSAAE
HHHHHHHHHHCCCCCCCCEEEHHHCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH
QLAYRVQEAQSVQGPYLVLTLVLVVLAAIVFLFRLPHLKESTEQNVRGHHYTLSDALRHP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEHHHHHCCH
HVIFSVLAIFCYVGAEVAIGSLMVSYFSMPHIGGFSEQQATHYVSIYWTLAMVGRFAGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
LLTLFQPRRLLAFFALINAGILGVSVATSGITAVYALVAIGLFNSIMFPTIFTLGIERLG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLTGRASSLMIMAIVGGAVVPYLQGVLADHVGLQVSFLLPLFCYLYIVFYGIWGSCIRGV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTERLS
HHHHCC
>Mature Secondary Structure 
TSNKTVSNNVAMAVATTIFFMWGFLTCLNDILIPHLKAVFELNFSQAMLVQFTFFGAYF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH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HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]

General reaction: Permease [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9168605 [H]