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The map label for this gene is 262192894

Identifier: 262192894

GI number: 262192894

Start: 1951305

End: 1951853

Strand: Reverse

Name: 262192894

Synonym: BMA10247_A2018

Alternate gene names: NA

Gene position: 1951853-1951305 (Counterclockwise)

Preceding gene: 126446608

Following gene: 126447820

Centisome position: 82.96

GC content: 62.84

Gene sequence:

>549_bases
ATGGTTCGACAAAAGGATGGACAGAAATTCATCGGGGAGAGTCGTGCGCCCCGCGTGCAGATTGAATACGACGTGGAGGT
GTACGGCTCGCAGAAGAAGGTCGAGCTGCCGTTCGTCGCGGGCGTGATGGCGGACCTGTCGGGCGACAACGTCGAGCCGC
TCGGCCCGGTCGAGGATCGGCGCTTTCAGGAGATCGACGTCGAGAACTTCGATGAGCGCATGGCGCAGATCGCGCCGTCG
CTGAGCTATCACGTGAAGAACGTGCTGACCAACGACGGCACGCTGATTCCGATCGATCTGACGTTCACGTCGATGGAATC
GTTCGAGCCGGCGGACGTCGTCAAGCGCATTCCCGAGCTGTCGACGCTGCTCGAGGCGCGCAACCGGCTGAAGGAGCTGC
TGACCTACATGGACGGCAAGGCGGCAGCCGAGGACGTGATCCAGGAATTGTTGAAGAGCCCGCAGTGGGCGAACGAGGCC
GACGCGGCGGAGCAATCCGGCGGCGCCGGCGAGGGTGGAGACCATCAACCGGAAGAGGGTGCGAAATGA

Upstream 100 bases:

>100_bases
GGCGGAGCTCTATCCCGAGGCGGCATCTCTCGTGGCCCAACTGAGCCGGCCGCAGAGTTCCAAGTAACGTGAACAACTTC
GTGTAGAGGGTTTGCTCATC

Downstream 100 bases:

>100_bases
GTATGCAGCAGCTTGAATCGTCTGCCGAGAAGGTGGTCGTCGATCAGAACAACGTCAACGAGGATCTGAAGGACATCCTG
CGCCGCTCGTTCCGGCCGCG

Product: type VI secretion protein

Products: NA

Alternate protein names: T6ss S; Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MVRQKDGQKFIGESRAPRVQIEYDVEVYGSQKKVELPFVAGVMADLSGDNVEPLGPVEDRRFQEIDVENFDERMAQIAPS
LSYHVKNVLTNDGTLIPIDLTFTSMESFEPADVVKRIPELSTLLEARNRLKELLTYMDGKAAAEDVIQELLKSPQWANEA
DAAEQSGGAGEGGDHQPEEGAK

Sequences:

>Translated_182_residues
MVRQKDGQKFIGESRAPRVQIEYDVEVYGSQKKVELPFVAGVMADLSGDNVEPLGPVEDRRFQEIDVENFDERMAQIAPS
LSYHVKNVLTNDGTLIPIDLTFTSMESFEPADVVKRIPELSTLLEARNRLKELLTYMDGKAAAEDVIQELLKSPQWANEA
DAAEQSGGAGEGGDHQPEEGAK
>Mature_182_residues
MVRQKDGQKFIGESRAPRVQIEYDVEVYGSQKKVELPFVAGVMADLSGDNVEPLGPVEDRRFQEIDVENFDERMAQIAPS
LSYHVKNVLTNDGTLIPIDLTFTSMESFEPADVVKRIPELSTLLEARNRLKELLTYMDGKAAAEDVIQELLKSPQWANEA
DAAEQSGGAGEGGDHQPEEGAK

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20121; Mature: 20121

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQKDGQKFIGESRAPRVQIEYDVEVYGSQKKVELPFVAGVMADLSGDNVEPLGPVEDR
CCCCCCCCHHHCCCCCCEEEEEEEEEEECCCCEEECHHHHHHHHHCCCCCCCCCCCCCCC
RFQEIDVENFDERMAQIAPSLSYHVKNVLTNDGTLIPIDLTFTSMESFEPADVVKRIPEL
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
STLLEARNRLKELLTYMDGKAAAEDVIQELLKSPQWANEADAAEQSGGAGEGGDHQPEEG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC
AK
CC
>Mature Secondary Structure
MVRQKDGQKFIGESRAPRVQIEYDVEVYGSQKKVELPFVAGVMADLSGDNVEPLGPVEDR
CCCCCCCCHHHCCCCCCEEEEEEEEEEECCCCEEECHHHHHHHHHCCCCCCCCCCCCCCC
RFQEIDVENFDERMAQIAPSLSYHVKNVLTNDGTLIPIDLTFTSMESFEPADVVKRIPEL
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
STLLEARNRLKELLTYMDGKAAAEDVIQELLKSPQWANEADAAEQSGGAGEGGDHQPEEG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC
AK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA