Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 262192886
Identifier: 262192886
GI number: 262192886
Start: 1957862
End: 1958863
Strand: Direct
Name: 262192886
Synonym: BMA10247_A2024
Alternate gene names: NA
Gene position: 1957862-1958863 (Clockwise)
Preceding gene: 126446628
Following gene: 126447091
Centisome position: 83.22
GC content: 74.55
Gene sequence:
>1002_bases ATGACGCGCACCGGCATGATCCTGCTGTCGCTCGGCACGGCGGCGTTCGTCGCCCTCCTCGCGTGGCAGGGCCTCGGCGC GGTCGCGGCGACGCTCGCATCGGCCGGCTGGGGCCTCGCGCTCGTCGCGGCGTTCCACCTGGTGCCGCTCGTCATCGATG CGACGGCGATCGCGGTGATGTTCCGTCCGGGCGAGCCCGGCAGCCGGCTCGGCGAAGCGCTGCGCGCGCGCTGGGTCGGC GAAGCGGTGAACAGCCTGCTGCCCGCCGGGCAGATCGGCGGGCCGGTGCTGATGGTCCGCTATCTCGCACAGCGCGGCGC GCGCCTCGCCGACGCGGCGGCCGCGATCACGGTCAGCACGACGATGCAGGCGCTCGCGCAAATGGTGTTCGCGCTCGTCG GCATCGCGGCGTTCAGCGCGTACGCGACGCATGACGCCGCCGCGCATCTGCGCACGCCGGCGCTGATCGCGACCGCGGTG CTGGGCGGCTGCGCCGCGCTCTTCTACTGCGCGCAGCGCCGGGGCCTGTTCGGGCGCGGGCTGCGCACGGCGTCGACGCT GCTCGGCCCGCGCGACTGGTCGTCGCTCGCCACGCGCGCGGACGCGATCGACCACGCGCTCGACCGGCTGTACCGCGAGC GTGCGAAAGTCCGCGCGACATTCGTGCTGAGCTTCGTCGGCTGGATCGTCGGCACCGCGGAAGTGTGGCTCGCGCTGCGC TTCCTCGGCCACCCGGTGAGCTGGCTCGACGCGCTGCTGCTCGAGAGCGTCGGGCAGGCGATCCGCGGCGCCGCGTTCGC GATCCCCGGCTCGCTCGGCGCGCAGGAAGGCGGCTATCTGCTGCTCGCGCCGCTCGTCGGCCTGCCGCCCGACGCGGCGC TCGCGCTGTCGCTCGCCAAGCGCGCGCGCGAGCTCGCGCTCGGCCTGCCCGGCCTCCTGTACCTGCATTTCAGTGAAAGA AACTGGCAGCGGCGGCGCGCGCCGCAGCCGATCGCCGACTGA
Upstream 100 bases:
>100_bases GGCATGCGCCCGTGGAAACGCTTCGTGTCGAACATGAAGGACGCGATCGCGTACTTCGGCTTCCGTCAGGTATTCAAGCA AACGGCCGCTCGCCGCGCTC
Downstream 100 bases:
>100_bases TCCGGCGTGATGGTCGGCGCCCTTTGCGTGGAGAACTCATGCGAGCCATCATTCTTGCGGCGGGCTTAGGCCTGCGCCTG CAACTGCCTCCCGAGGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVMFRPGEPGSRLGEALRARWVG EAVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVSTTMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAV LGGCAALFYCAQRRGLFGRGLRTASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALR FLGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELALGLPGLLYLHFSER NWQRRRAPQPIAD
Sequences:
>Translated_333_residues MTRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVMFRPGEPGSRLGEALRARWVG EAVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVSTTMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAV LGGCAALFYCAQRRGLFGRGLRTASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALR FLGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELALGLPGLLYLHFSER NWQRRRAPQPIAD >Mature_332_residues TRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVMFRPGEPGSRLGEALRARWVGE AVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVSTTMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAVL GGCAALFYCAQRRGLFGRGLRTASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALRF LGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAKRARELALGLPGLLYLHFSERN WQRRRAPQPIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34969; Mature: 34838
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVM CCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEE FRPGEPGSRLGEALRARWVGEAVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVST ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH TMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAVLGGCAALFYCAQRRGLFGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC LRTASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAK HHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH RARELALGLPGLLYLHFSERNWQRRRAPQPIAD HHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCC >Mature Secondary Structure TRTGMILLSLGTAAFVALLAWQGLGAVAATLASAGWGLALVAAFHLVPLVIDATAIAVM CCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEE FRPGEPGSRLGEALRARWVGEAVNSLLPAGQIGGPVLMVRYLAQRGARLADAAAAITVST ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH TMQALAQMVFALVGIAAFSAYATHDAAAHLRTPALIATAVLGGCAALFYCAQRRGLFGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC LRTASTLLGPRDWSSLATRADAIDHALDRLYRERAKVRATFVLSFVGWIVGTAEVWLALR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGHPVSWLDALLLESVGQAIRGAAFAIPGSLGAQEGGYLLLAPLVGLPPDAALALSLAK HHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH RARELALGLPGLLYLHFSERNWQRRRAPQPIAD HHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA