Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is crtB [H]

Identifier: 262192850

GI number: 262192850

Start: 2037158

End: 2038228

Strand: Reverse

Name: crtB [H]

Synonym: BMA10247_A2107

Alternate gene names: 262192850

Gene position: 2038228-2037158 (Counterclockwise)

Preceding gene: 126446211

Following gene: 262192877

Centisome position: 86.63

GC content: 69.56

Gene sequence:

>1071_bases
ATGACCGACCTGATCCGATCCATGGGCAATTCCACCCGGGCCTTTCTGCTGGGCCCCCTGCTGAAGGGCGTGTCGCGCTC
CTTCTATCTGACGTTGCGCGTGCTGCCGCAAGGCATGCGCGACCCGATCGGCCTTGCGTATCTGCTCGCGCGCGCGGCCG
ACACGATCGCCGACACGTCGCTGATCCCGCCCGCTCAGCGGCTCGAACTGCTGCTGTCGCTGCGCGCGCAGATCAACGGC
GCGCCCGATCCGCACGCGCTCGCGCGGATCGCGGGCGAGGTCGCGGGGCAGCAGGCGCAGACGGACGAGAAGACGCTGCT
CGAATCGCTTGGCCCCGCGCTCGCGGTGCTGTCGCAATTGAGCGCGCCCGATCGCGCCGCGGTGCGCGGCGTCGTCACCA
CGCTCACCGAAGGGATGGAATTCGATTTGCGCACGTTCCCGGACGAATCGTCGGGCCGCATCGTCGCGCTGCGGGAATGG
CCGGCGCTCGATCGCTATACGTATCTCGTTGCCGGCTGCGTCGGCGAATTCTGGACGAAGATGACGTGCGCGCATCTGCC
CGGGCTGCTGACCGAGCGGGAGGACACGATGAGCGAGCGCGGCATCCGCTTCGGCAAGGCGCTGCAGATGACCAACGTGC
TGCGCGACTGCGGCAGGGACCTGCGGATCGGCCGCTGCTATCTGCCGCAGGCGATGCTGGACGAATACGGGCTGCGCGCG
GAGGATCTGCTGGGGCCGGACGCTTCGCTGCGCGTACGGCCGCTGATGCATGCGCTCGTGCGCACGACGCTCGCGCATTT
TCGCGCGGGCATCGATTATACGTTCGCGATTCCGCGCCGCGCGCCGCGCCTGCGGCTTGCCTGTTTCTGGCCGATCGCGA
TCGGCCTGCGGACGCTCGCGCTGCTCGCGTCGAACGACGCGTGGCTCGATCCGGCGCGCGCGTCGAAGGTGCGGCGCGGC
GACGTCTACCGGATCCTCGCGTATTCGCTGCCGCTCGCGATGTCGAACGGCGCGCTGCGCGCGTGGCTCGACCGCCTGAT
CGCGGACGTCGAGGCGCGGCTCATCGCGTGA

Upstream 100 bases:

>100_bases
CGCGCCGTGCGGCGCGCCCGGTCGCACCCTGCGCGGCCGGCCGTGCGCGAAGCGCCGGCGGCCCGCGCGCATTTGCCGAT
ACAATGCGGCAGCCATTCGT

Downstream 100 bases:

>100_bases
TGCGCGGCGCGCCCGGCCGCGCGCGTCACGGACGCGTCCACGCCGCCGCCTTTTGCGCGGCATTCCCGCCGCCGAGCGCG
TCGATCAGATAATCGACGAA

Product: squalene/phytoene synthase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTDLIRSMGNSTRAFLLGPLLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQING
APDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGMEFDLRTFPDESSGRIVALREW
PALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRA
EDLLGPDASLRVRPLMHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPARASKVRRG
DVYRILAYSLPLAMSNGALRAWLDRLIADVEARLIA

Sequences:

>Translated_356_residues
MTDLIRSMGNSTRAFLLGPLLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQING
APDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGMEFDLRTFPDESSGRIVALREW
PALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRA
EDLLGPDASLRVRPLMHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPARASKVRRG
DVYRILAYSLPLAMSNGALRAWLDRLIADVEARLIA
>Mature_355_residues
TDLIRSMGNSTRAFLLGPLLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQRLELLLSLRAQINGA
PDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAAVRGVVTTLTEGMEFDLRTFPDESSGRIVALREWP
ALDRYTYLVAGCVGEFWTKMTCAHLPGLLTEREDTMSERGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAE
DLLGPDASLRVRPLMHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDAWLDPARASKVRRGD
VYRILAYSLPLAMSNGALRAWLDRLIADVEARLIA

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321984, Length=321, Percent_Identity=24.2990654205607, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 39245; Mature: 39114

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLIRSMGNSTRAFLLGPLLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTS
CCHHHHHCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
LIPPAQRLELLLSLRAQINGAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHC
SAPDRAAVRGVVTTLTEGMEFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTK
CCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
MTCAHLPGLLTEREDTMSERGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRA
HHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHCCCH
EDLLGPDASLRVRPLMHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHH
LLASNDAWLDPARASKVRRGDVYRILAYSLPLAMSNGALRAWLDRLIADVEARLIA
HHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDLIRSMGNSTRAFLLGPLLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTS
CHHHHHCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
LIPPAQRLELLLSLRAQINGAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHC
SAPDRAAVRGVVTTLTEGMEFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTK
CCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
MTCAHLPGLLTEREDTMSERGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRA
HHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHCCCH
EDLLGPDASLRVRPLMHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHH
LLASNDAWLDPARASKVRRGDVYRILAYSLPLAMSNGALRAWLDRLIADVEARLIA
HHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]