Click here to switch to the map view.

The map label for this gene is ytsP

Identifier: 255767680

GI number: 255767680

Start: 3033167

End: 3033658

Strand: Direct

Name: ytsP

Synonym: BSU29640

Alternate gene names: 255767680

Gene position: 3033167-3033658 (Clockwise)

Preceding gene: 16080014

Following gene: 16080018

Centisome position: 71.95

GC content: 46.75

Gene sequence:

>492_bases
ATGTTCCATGTCGAAAAACAATCTGGAGATAAAGAAAAAGACTATCAGCTTCTGCTAAAACAGCTCGAAGCCATGACCGA
AGACGAAACAGACCAAATAGCTAACTATGCAAATGCCTCAGCACTGCTGTATCATTCGCTGCCTGAAGTCAACTGGGCGG
GTTTCTATTTTGCCAAAGAAGAGGATGGACAGCTTGTGTTAGGTCCGTTCCAAGGCCTGCCGGCATGTGTTCGGATTCCT
TTCGGCAGAGGGGTTTGCGGCACAGCGTACGCAAACGGAAAAGTGGAACGTATTGAGGATGTAAACGCGTTTCCGGGACA
TATCGCCTGCGATGCAGCGTCTCAATCAGAAATTGTGCTTCCGATTCGTGTAGACGGAAAAATTGTCGGCGTCTTGGACA
TCGACAGCCCAGTGAAAAACCGTTTCGACGAAATTGATGAAAAATACTTAACTCAATTTGCCGAAACGCTAGAAAAAGCG
TTAGCGCAGTAA

Upstream 100 bases:

>100_bases
ATTCAAGCAGAAAGCCGCTGTTCCTGTAAGAACTTATCGACAAATGCCGGCAGAAAAGCCGGAACTTTGTTTTATATTAT
AGAAAAAGTGAGGGTTTTCC

Downstream 100 bases:

>100_bases
TATAAAAGCCCAAAACTGATATCGTTTTGGGCTTTTTTTATTTTATTGAGTCATGAATCATCAAGCGGTTTTTCCCGCTC
CGTTTCGCGCTGTAGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MFHVEKQSGDKEKDYQLLLKQLEAMTEDETDQIANYANASALLYHSLPEVNWAGFYFAKEEDGQLVLGPFQGLPACVRIP
FGRGVCGTAYANGKVERIEDVNAFPGHIACDAASQSEIVLPIRVDGKIVGVLDIDSPVKNRFDEIDEKYLTQFAETLEKA
LAQ

Sequences:

>Translated_163_residues
MFHVEKQSGDKEKDYQLLLKQLEAMTEDETDQIANYANASALLYHSLPEVNWAGFYFAKEEDGQLVLGPFQGLPACVRIP
FGRGVCGTAYANGKVERIEDVNAFPGHIACDAASQSEIVLPIRVDGKIVGVLDIDSPVKNRFDEIDEKYLTQFAETLEKA
LAQ
>Mature_163_residues
MFHVEKQSGDKEKDYQLLLKQLEAMTEDETDQIANYANASALLYHSLPEVNWAGFYFAKEEDGQLVLGPFQGLPACVRIP
FGRGVCGTAYANGKVERIEDVNAFPGHIACDAASQSEIVLPIRVDGKIVGVLDIDSPVKNRFDEIDEKYLTQFAETLEKA
LAQ

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family

Homologues:

Organism=Escherichia coli, GI171474009, Length=153, Percent_Identity=58.1699346405229, Blast_Score=171, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6322781, Length=165, Percent_Identity=41.8181818181818, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTSP_BACSU (O34553)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   D70001
- RefSeq:   NP_390842.2
- ProteinModelPortal:   O34553
- SMR:   O34553
- EnsemblBacteria:   EBBACT00000002738
- GeneID:   936758
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29640
- NMPDR:   fig|224308.1.peg.2967
- GenoList:   BSU29640
- GeneTree:   EBGT00050000002126
- ProtClustDB:   CLSK929068
- BioCyc:   BSUB:BSU29640-MONOMER
- InterPro:   IPR003018
- InterPro:   IPR000614
- SMART:   SM00065

Pfam domain/function: PF01590 GAF

EC number: NA

Molecular weight: Translated: 18069; Mature: 18069

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHVEKQSGDKEKDYQLLLKQLEAMTEDETDQIANYANASALLYHSLPEVNWAGFYFAKE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHEEEECCCCCCCCEEEEEEC
EDGQLVLGPFQGLPACVRIPFGRGVCGTAYANGKVERIEDVNAFPGHIACDAASQSEIVL
CCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEHHCCCCCCCEEEECCCCCCCEEE
PIRVDGKIVGVLDIDSPVKNRFDEIDEKYLTQFAETLEKALAQ
EEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFHVEKQSGDKEKDYQLLLKQLEAMTEDETDQIANYANASALLYHSLPEVNWAGFYFAKE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHEEEECCCCCCCCEEEEEEC
EDGQLVLGPFQGLPACVRIPFGRGVCGTAYANGKVERIEDVNAFPGHIACDAASQSEIVL
CCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEHHCCCCCCCEEEECCCCCCCEEE
PIRVDGKIVGVLDIDSPVKNRFDEIDEKYLTQFAETLEKALAQ
EEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377