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The map label for this gene is yqjV

Identifier: 255767514

GI number: 255767514

Start: 2466721

End: 2467953

Strand: Direct

Name: yqjV

Synonym: BSU23730

Alternate gene names: 255767514

Gene position: 2466721-2467953 (Clockwise)

Preceding gene: 16079429

Following gene: 16079431

Centisome position: 58.51

GC content: 46.07

Gene sequence:

>1233_bases
ATGAAGAAATGGAAAGATATCCACCCGATCAGCTGGACAATTATAATCGGAACCATTTTCGGCAGAATGGCAACATCGAT
GAGCATTCCTTTTTTAGCGATTTATTTGACAGCCGTCCAAGGCGCATCAGCTTCCTATGCAGGGCTGGTCATCGCCGCGA
GCTCATCAGTCGGCATCCTCGCAAGCTTTTACGGCGGATATATCTCAGATAAATTCGGCAGAAAAAACATGATGCTTGTA
TCGATTTTCGGATGGATGCTGGTATTTGCAGGCTTTGCGGCAGCATCTAATCTCTGGGTGTTTTTTGTAGTAAACGCATT
AAACGGTCTTTGCAAATCACTGTTTGAGCCCGCTTCAAAGGCCTTGTTGTCTGATATGACAGAAGAAAAAACGAGACTGC
TAGTTTTTAATTTACGCTATGCGGCTATTAATATCGGCGTTGTCTTCGGACCTGTGCTTGGCCTATATTTCGGCTCATCG
CAATCGACTACGCCCTTTTTGGTGCCTGCAGTCATTTACGGACTATACGGAATTGTGCTTGCCCTCCAATTTAAAAAACA
TCCATCCTTATCAGCACCAGCCCAGTCCCGAAATATGAGCGTGCGGGAAGCGTTTATGGTCACGCAAAAGGATTATCTTT
TTACCATTGCTTTGGTCGGCATTACGCTATGCACCTTCGGCTACTCACAATTCAGTTCCACATTCCCTCAGTATATGGCG
CAGAACCCCTTGATCGGCAATGGAACGAAGCTGTATGGGCTGATGCTGACATTAAACGCAATCGTTGTGTTGGCGACGCA
ATTTCCCATTGTCCATTTTGCAAAACGGTTTTCGCCGCTTTGTTCTCTGATGCTCGGTAATGTGATGGTTAGCATCAGCA
TGGCCATTTTCACCGTATCACACGGTGTTCCATCAATTGTGATGATTGTCATCACATTTACAATCGGCGAAGTGCTTTTA
TTCTCTATGATGGATTTGTATGTAGACCAGATTGCAAAACCAGGATTAAAAGGCACTTATTTCGGGGCAATCGGTTTTTC
ACAGCTCGGAAACGTCATCGGCCCTTGGGTCGGGGGGATATGTATAGACCTGTTTGGCGCTGGCCGGCCGATTTATATTT
TTTCTGTCCTGAGCGGCATTACCCTGCTCGGCCTGCCATTTTTAGCGTTCGCCTATCGGCAAATGAAAATGGAGACCACA
AAACACCGTTCCCGTCTGGAAAAGCCGCTTTAA

Upstream 100 bases:

>100_bases
CTACATGTCAATAACGAAATATTTTGAACGATCTATTGGAGAAGGAAATTTTTTCATATATGATAGAGAAAGATCATACA
TACAGGAGAGAATATAATTC

Downstream 100 bases:

>100_bases
ATAAAAAACGGAAGAGAATGAATCTCTCCCGCAAACATGAGGTGAAGAACATGAATATAGGTGATGTGATGTTTCAGCTG
TTTGTATTTATTATATTTGC

Product: efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKKWKDIHPISWTIIIGTIFGRMATSMSIPFLAIYLTAVQGASASYAGLVIAASSSVGILASFYGGYISDKFGRKNMMLV
SIFGWMLVFAGFAAASNLWVFFVVNALNGLCKSLFEPASKALLSDMTEEKTRLLVFNLRYAAINIGVVFGPVLGLYFGSS
QSTTPFLVPAVIYGLYGIVLALQFKKHPSLSAPAQSRNMSVREAFMVTQKDYLFTIALVGITLCTFGYSQFSSTFPQYMA
QNPLIGNGTKLYGLMLTLNAIVVLATQFPIVHFAKRFSPLCSLMLGNVMVSISMAIFTVSHGVPSIVMIVITFTIGEVLL
FSMMDLYVDQIAKPGLKGTYFGAIGFSQLGNVIGPWVGGICIDLFGAGRPIYIFSVLSGITLLGLPFLAFAYRQMKMETT
KHRSRLEKPL

Sequences:

>Translated_410_residues
MKKWKDIHPISWTIIIGTIFGRMATSMSIPFLAIYLTAVQGASASYAGLVIAASSSVGILASFYGGYISDKFGRKNMMLV
SIFGWMLVFAGFAAASNLWVFFVVNALNGLCKSLFEPASKALLSDMTEEKTRLLVFNLRYAAINIGVVFGPVLGLYFGSS
QSTTPFLVPAVIYGLYGIVLALQFKKHPSLSAPAQSRNMSVREAFMVTQKDYLFTIALVGITLCTFGYSQFSSTFPQYMA
QNPLIGNGTKLYGLMLTLNAIVVLATQFPIVHFAKRFSPLCSLMLGNVMVSISMAIFTVSHGVPSIVMIVITFTIGEVLL
FSMMDLYVDQIAKPGLKGTYFGAIGFSQLGNVIGPWVGGICIDLFGAGRPIYIFSVLSGITLLGLPFLAFAYRQMKMETT
KHRSRLEKPL
>Mature_410_residues
MKKWKDIHPISWTIIIGTIFGRMATSMSIPFLAIYLTAVQGASASYAGLVIAASSSVGILASFYGGYISDKFGRKNMMLV
SIFGWMLVFAGFAAASNLWVFFVVNALNGLCKSLFEPASKALLSDMTEEKTRLLVFNLRYAAINIGVVFGPVLGLYFGSS
QSTTPFLVPAVIYGLYGIVLALQFKKHPSLSAPAQSRNMSVREAFMVTQKDYLFTIALVGITLCTFGYSQFSSTFPQYMA
QNPLIGNGTKLYGLMLTLNAIVVLATQFPIVHFAKRFSPLCSLMLGNVMVSISMAIFTVSHGVPSIVMIVITFTIGEVLL
FSMMDLYVDQIAKPGLKGTYFGAIGFSQLGNVIGPWVGGICIDLFGAGRPIYIFSVLSGITLLGLPFLAFAYRQMKMETT
KHRSRLEKPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family

Homologues:

Organism=Escherichia coli, GI1787815, Length=358, Percent_Identity=24.8603351955307, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87081828, Length=329, Percent_Identity=24.0121580547112, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJV_BACSU (P54559)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   F69965
- RefSeq:   NP_390254.2
- ProteinModelPortal:   P54559
- EnsemblBacteria:   EBBACT00000003903
- GeneID:   938706
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23730
- NMPDR:   fig|224308.1.peg.2378
- GenoList:   BSU23730
- GeneTree:   EBGT00070000031991
- HOGENOM:   HBG552251
- PhylomeDB:   P54559
- ProtClustDB:   CLSK887533
- BioCyc:   BSUB:BSU23730-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001958
- PRINTS:   PR01035

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 44690; Mature: 44690

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50850 MFS; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10a73520)-; HASH(0xfdcd0a4)-; HASH(0xdaf9f90)-; HASH(0x10804828)-; HASH(0x10a319c0)-; HASH(0x1033646c)-; HASH(0x108f1ae4)-; HASH(0xfb87be4)-; HASH(0x10a89b54)-; HASH(0x10af6498)-; HASH(0xffdaeec)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWKDIHPISWTIIIGTIFGRMATSMSIPFLAIYLTAVQGASASYAGLVIAASSSVGIL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
ASFYGGYISDKFGRKNMMLVSIFGWMLVFAGFAAASNLWVFFVVNALNGLCKSLFEPASK
HHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ALLSDMTEEKTRLLVFNLRYAAINIGVVFGPVLGLYFGSSQSTTPFLVPAVIYGLYGIVL
HHHHHHHHHCCEEEEEEEEEHHEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
ALQFKKHPSLSAPAQSRNMSVREAFMVTQKDYLFTIALVGITLCTFGYSQFSSTFPQYMA
HHHHCCCCCCCCCCHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QNPLIGNGTKLYGLMLTLNAIVVLATQFPIVHFAKRFSPLCSLMLGNVMVSISMAIFTVS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGVPSIVMIVITFTIGEVLLFSMMDLYVDQIAKPGLKGTYFGAIGFSQLGNVIGPWVGGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHH
CIDLFGAGRPIYIFSVLSGITLLGLPFLAFAYRQMKMETTKHRSRLEKPL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MKKWKDIHPISWTIIIGTIFGRMATSMSIPFLAIYLTAVQGASASYAGLVIAASSSVGIL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
ASFYGGYISDKFGRKNMMLVSIFGWMLVFAGFAAASNLWVFFVVNALNGLCKSLFEPASK
HHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ALLSDMTEEKTRLLVFNLRYAAINIGVVFGPVLGLYFGSSQSTTPFLVPAVIYGLYGIVL
HHHHHHHHHCCEEEEEEEEEHHEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
ALQFKKHPSLSAPAQSRNMSVREAFMVTQKDYLFTIALVGITLCTFGYSQFSSTFPQYMA
HHHHCCCCCCCCCCHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QNPLIGNGTKLYGLMLTLNAIVVLATQFPIVHFAKRFSPLCSLMLGNVMVSISMAIFTVS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGVPSIVMIVITFTIGEVLLFSMMDLYVDQIAKPGLKGTYFGAIGFSQLGNVIGPWVGGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHH
CIDLFGAGRPIYIFSVLSGITLLGLPFLAFAYRQMKMETTKHRSRLEKPL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377