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The map label for this gene is yezC

Identifier: 255767169

GI number: 255767169

Start: 711456

End: 711875

Strand: Reverse

Name: yezC

Synonym: BSU06540

Alternate gene names: 255767169

Gene position: 711875-711456 (Counterclockwise)

Preceding gene: 255767171

Following gene: 255767157

Centisome position: 16.89

GC content: 50.0

Gene sequence:

>420_bases
ATGGACGATACAGACCTTCAGATTCTCTCGCATTTGCAGCGAAACGGCAGATTAACGATGGTTGAGCTGGGAAAGCTTGT
CGGACTCAGCTCGCCAAGCGCGGCGGAGCGTGTCAGGAAGCTGGAAGACAAAGGAGTGATTACCGGCTACAGCGCGAATA
TCTGTTACGAAAAACTAAACAAGCATGTCACCGCTTTTATTCTCATGGAGCCGAAAAGCTGCAAGCACTACGCCGCCTTT
GCAACATCGCATCCTGATGTAGCAGAAAACCACCGCATCACGGGGATGTACAGCTATGTGACAAAGGTCGTGACTGAATC
GGTACATACGCTTGAGGATTTTATTGACACCTCGATGGCCCATGGAAAACCAACCACGCTCGTTGTGCTTTCTTCTTCTA
GCTGCCATCCCGCTTTTTGA

Upstream 100 bases:

>100_bases
GACGGCATCCATATGCTACAATGAAGTTAAATCAACAGCATTACCTTACGATCAAAGGAATTTTCATTCATTCGCCTAAA
TATGTAAAGGAGCCAGACAA

Downstream 100 bases:

>100_bases
TAACAAAAAACCCGCAGCTATTCTGCGGGTTTTCCTCACTTATTTTTGGGCAGCCTTTAAAGCGCGTGCCCCAATGTCTT
TTCTGAAAAAGAGTCCCGGT

Product: Lrp/AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDDTDLQILSHLQRNGRLTMVELGKLVGLSSPSAAERVRKLEDKGVITGYSANICYEKLNKHVTAFILMEPKSCKHYAAF
ATSHPDVAENHRITGMYSYVTKVVTESVHTLEDFIDTSMAHGKPTTLVVLSSSSCHPAF

Sequences:

>Translated_139_residues
MDDTDLQILSHLQRNGRLTMVELGKLVGLSSPSAAERVRKLEDKGVITGYSANICYEKLNKHVTAFILMEPKSCKHYAAF
ATSHPDVAENHRITGMYSYVTKVVTESVHTLEDFIDTSMAHGKPTTLVVLSSSSCHPAF
>Mature_139_residues
MDDTDLQILSHLQRNGRLTMVELGKLVGLSSPSAAERVRKLEDKGVITGYSANICYEKLNKHVTAFILMEPKSCKHYAAF
ATSHPDVAENHRITGMYSYVTKVVTESVHTLEDFIDTSMAHGKPTTLVVLSSSSCHPAF

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1787116, Length=107, Percent_Identity=32.7102803738318, Blast_Score=63, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEZC_BACSU (O31497)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_388536.2
- HSSP:   P96582
- ProteinModelPortal:   O31497
- SMR:   O31497
- EnsemblBacteria:   EBBACT00000002270
- GeneID:   936047
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU06540
- GenoList:   BSU06540
- GeneTree:   EBGT00050000002026
- ProtClustDB:   CLSK643815
- BioCyc:   BSUB:BSU06540-MONOMER
- GO:   GO:0005622
- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR000835
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00033
- SMART:   SM00344

Pfam domain/function: PF01037 AsnC_trans_reg; PF01047 MarR; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 15339; Mature: 15339

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00519 HTH_ASNC_1; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTDLQILSHLQRNGRLTMVELGKLVGLSSPSAAERVRKLEDKGVITGYSANICYEKLN
CCCHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHC
KHVTAFILMEPKSCKHYAAFATSHPDVAENHRITGMYSYVTKVVTESVHTLEDFIDTSMA
CCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
HGKPTTLVVLSSSSCHPAF
CCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MDDTDLQILSHLQRNGRLTMVELGKLVGLSSPSAAERVRKLEDKGVITGYSANICYEKLN
CCCHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHC
KHVTAFILMEPKSCKHYAAFATSHPDVAENHRITGMYSYVTKVVTESVHTLEDFIDTSMA
CCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
HGKPTTLVVLSSSSCHPAF
CCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377