Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24376026

GI number:

Start: 4747944

End: 4750061

Strand: Direct

Name: Not Available

Synonym: SO_4552

Alternate gene names: NA

Gene position: NA

Preceding gene: 24376023

Following gene: 24376030

Centisome position: NA

GC content: NA

Gene sequence:

>2118_bases
ATGATTCGATGGCAGCACTTGCTAAATAAACTCACAACAGATGACCCACTGTTGCAAGAAAAGCTCTCTGTTTGGCGAAT
CCATCCCCATAAAACACCCCTCGCGCTGATCCAAGGTTTTAGTTTTATCAGTGCAAACAGTGCCACCCTCGACTACTTTG
GCACCGAATATGATACGTTTGTCAATGCAACTCCCTATGACTTTTCGCCTAGAATTCAATCATCTGGGCGTAACAGCGTT
GAATTTGCGCGGGAGATGATTCTAGAAGCCGTTTCAGGGATTAATGTCGAATTCAGTTGGCTCCACCTTAATCAACAAGG
GAACGAACTGCCTACTCGGGTGAACCTCTATCGCTGCTATCTACAGCAACAGCCTGTTGTACTGGTCGAGTTACAAGCGT
TAAACCGTAGAACCCAAGTCAGGCCAGCCATTGCCGACGGCTTTGCCCATATTCCGAAAGAAATCCTCTCGACGACCTTA
GAAGAAAGTGCCGAAGCGGTTTATATCACTGATATCGATAATAAAATTTTGGCGGTCAACAAGGCGATGTGCCGTATTTG
CGGTTATAGCGCAGAGCAATTAATCAATAAAACCCCATTTTTTTTAGAAGCCAGCCCACTCAATGCCAGTGACGAAAGCG
AGTGCCTGCAAGCTTTAAAACAGCGTGGCTTTTGGCAGGGCGAAACCTTAAAACAACGTTCTGATGGCAGCACATTTCCA
GCATGGCAAAGTAGTCGCCGCATCGCTGCAGATGGTCTTGAGTATCATGTAAATATCTTTAGTGATATCAGCACTAAAAA
ACTGCTCGAAACACAACTCACTACTCGTGCCATGTATGACACCTTAACGGGGTTACCAAATCGTTTCCATCTTAAACAGA
TCCTTAATGGCGCCCTCGACAAACTAAAGGACGATCCCCTCGCCCTCGGTGCACTGATGTTTTTGGACCTCAACGGTTTT
AAAAATATCAATGACAGTTTTGGCCATTCCATGGGCGATAGAGTATTGCAACTGGTCGCAGCACGCTTAGAAGCCGGTTG
CATCGAAAAAGCGGATATTGCCCGCATGGGCGGCGACGAATTTACCCTAGTGCTGCAGGATTGTAGTTGCAAGGAAGAAA
TCCAACTGTTTGCCGAGCAAATTTTAAGCTTGTTCGACAGCCCGTTTGAAATTGAAGGCCAAAAGTTTTTCCTCGGCACT
AGCATTGGCATCGCGCTTTTTCCAACACACAGTGATCAAGCTGGCCAACTGATTAGCTTGGCCGACACAGCCATGTATTG
CGCGAAAAAAAACCAGCCTCATTTAGTGTTTTATGATAAATCCATGAGCCAAGCTGCCGAGCTTAAATTAAAACTTATCA
ATAACCTAAGACATGCCCACAGTTTAAAGCAGTTCAAACTTGCCTATCAGGCCATAGTCGATTTGCATACCAATAAACCG
ATTGCTGCCGAGGCCCTGCTACGTTGGCAAAAATCCCCCACAGAGCATTATGAAGCCGCTGAGTTTGTGCCTTTGCTGGA
GGAAACGGGCCTGATTGTCAGCATTGGGCAATGGGCACTCGAACAAGCCTGTAAGCAGGCATCAGTATGGCGAGCACAAT
ATCAGCCCGATTTTAAGATTTCAGTTAACGTATCGCCATTGCAATTGGAGCATGTGGACTTTGTAGGTCAAGTGGTTAAC
GCGCTTGAAATGGTTGCCCTACCCGCTGAAGCCTTAATTTTAGAAATCACTGAATCCGCGCTGCTGCGTCAACCTGAACA
GGCTCGTCATACACTTGAACGAATTAAAGCCTTAGGTGTTGGCATTGCTATTGATGACTTTGGCACAGGGCTGTCTTCGC
TCAGCCGTTTAGGAACCTTACCCATTGATAGCGTGAAGATTGATGCTGAATTTGCCCTCAGATTGACGGATGCCTCAGGA
CAAAAACTCTGCCATGCCATAGTGCAATTAGCACAGGCACTCGGCATTCACTTTGTAGCGGAAGGCATCGAGACCCAGCA
GCAAAAAGATATTATTACCCATATGGGACAAGGCTTTGCCCAAGGCTTTTTATTTGGTTATCCAAGTTATGTTGAGCAGT
TTACTGAGTCCTATTTGGCCGAGAAATGTATTGCTTAA

Upstream 100 bases:

>100_bases
CCATATGAATGATGTACGATTTGATACAAGCAAACTTTTGATTCAAGCAAACTAAGGGAAAGGATGTGACCTTAATCAAT
GTCACCGAGGGAGTATCCTA

Downstream 100 bases:

>100_bases
ACAGGAACGATTAAAAGCGCTTAAAACTCAGTGACTGATTGTTATTAAGATAATTTAGATTAGCTATCGGTAGGCTCGAT
AGCCCTGCCAGCACACCATA

Product: sensory box protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>705_residues
MIRWQHLLNKLTTDDPLLQEKLSVWRIHPHKTPLALIQGFSFISANSATLDYFGTEYDTFVNATPYDFSPRIQSSGRNSV
EFAREMILEAVSGINVEFSWLHLNQQGNELPTRVNLYRCYLQQQPVVLVELQALNRRTQVRPAIADGFAHIPKEILSTTL
EESAEAVYITDIDNKILAVNKAMCRICGYSAEQLINKTPFFLEASPLNASDESECLQALKQRGFWQGETLKQRSDGSTFP
AWQSSRRIAADGLEYHVNIFSDISTKKLLETQLTTRAMYDTLTGLPNRFHLKQILNGALDKLKDDPLALGALMFLDLNGF
KNINDSFGHSMGDRVLQLVAARLEAGCIEKADIARMGGDEFTLVLQDCSCKEEIQLFAEQILSLFDSPFEIEGQKFFLGT
SIGIALFPTHSDQAGQLISLADTAMYCAKKNQPHLVFYDKSMSQAAELKLKLINNLRHAHSLKQFKLAYQAIVDLHTNKP
IAAEALLRWQKSPTEHYEAAEFVPLLEETGLIVSIGQWALEQACKQASVWRAQYQPDFKISVNVSPLQLEHVDFVGQVVN
ALEMVALPAEALILEITESALLRQPEQARHTLERIKALGVGIAIDDFGTGLSSLSRLGTLPIDSVKIDAEFALRLTDASG
QKLCHAIVQLAQALGIHFVAEGIETQQQKDIITHMGQGFAQGFLFGYPSYVEQFTESYLAEKCIA

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA