Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 24375957

GI number:

Start: 4667254

End: 4669104

Strand: Reverse

Name: Not Available

Synonym: SO_4479

Alternate gene names: NA

Gene position: NA

Preceding gene: 24375959

Following gene: 24375954

Centisome position: NA

GC content: NA

Gene sequence:

>1851_bases
ATGACAGCAAAACCGCATTTTCCAACAATACAACCATGGCTAGCCGATTCGTGGCAACGCAGTATCGGCGCAGGCTTGTC
GGAGTTTCATGCCGCCGATGATCTTAGGCTCTCTCATGCAGACCTAAAGCATAAACATGAGCAATATCAACAGCTCATCG
AGCTGGTGCAATCCCATGCTTTACCTTTATTTAACCAACTCATGGCGCAATCCAATAGCCGGTTATTGCTCTCCGATGCT
GACGGTTATGTGCTGAAACATTGGGGCGTGAGTCGTTATTCCAGTAAGTTAGCGGATGTGGCGCTTGATATTGGGGTTAA
CTGGCTTGAACAGTATAAAGGCACCAATGCCATTGGCACGGCGCTCATGGCTAAGCAAGCGGTCTCAGTGGTTGGAGAGC
AGCATTTTATCCGCCAAAATCGTTTTATGAGTTGTACTGCTTGCCCGATTTTTTCGCCCCAAGGCGAGATGCTCGGGGTA
CTCGATATCACCAGTGAGCAACAGCGGCATTCACAACAGACCTTAATGTTAGTGTCGAGTTTGGCGCAGCAGGTTGAGAC
GGCGTTGTTGTGCCATTTGCCCGATAGTCACTATCGGATTGATTTAGCGGCCGAGCCAAGTTTATTAAGTTCTGGCTGGC
AAGGCATAGTGATTGCCGACAGCGAGGGGCGAATTGTGGGTTGTAATCCCATGGCAAAACAATTGCTGAGTCAAGCCAAG
CTGGGCGATAGCCTAGAGCTGCATTTGGGGGATAGCTGGACGCGTGCCGGGGGCTTCCATCGGGATTTGGCCCTACATTT
ACACACCCAGGCGTTGGGTGTTACGCAGACCAAAAGTGCGAAGACGATTCAAGATAAGCCGCAGAGTCAATTGGGGGTAA
GGTTTCGCGATCCTTTACTTGAGCGGGCTTGGCAGCAGGCGAATAAGGTCATCACTAAACAAATCCCTTTGCTGGTGCTC
GGTGAAACTGGGGTGGGTAAAGAGCAATTTGTCAAAAAGCTCCATGCCCAGAGCTCGCGCCGCGCGCAGCCTCTAGTGGC
GGTGAATTGCGCCGCGCTACCAGCCGAGTTAGTTGAGTCGGAGTTATTTGGTTATCAGGCGGGCGCTTTTACTGGGGCGA
ATCGTAGTGGCTTTATCGGTAAGATCCGCCAAGCCCATGGTGGCTTTTTGTTCCTCGATGAAATTGGCGAGATGCCGCAG
GCGGCACAGAGCCGATTGCTGAGGGTGTTGCAGGAGCGTGAAGTGGTTCCCGTCGGCAGTAATCAAAGCGTTAAGGTCGA
TATTCAGATCATCGCCGCGACCCATATGGATTTAGAGTCGCTGGTGGCCCAAGGGCTGTTTCGTCAGGATTTGTTTTATC
GTTTGAATGGATTGCAAGTGCGATTGCCTGCACTACGTGAGCGGCAGGATATTGAGCGTATTATCCATAAATTGCATCGG
CGCCACCGCAGCGGTCCACAAACCTTATGCACTGAGTTATTGGGGCAACTGATGCGTTACGATTGGCCGGGTAATCTGCG
AGAGTTAGATAATTTGATGCAGGTGGCTTGTTTGATGGCCGAGGACGATGAGGTGTTAGCGAGAGCGCATTTGCCCGAAC
ATTTAGCCAAAAAGTTAGTCAATAAGCCGCTTGCGGTTTATGAGAGACAACATGTTGAAAATCCGCAAAATCCCCGCGAT
AAGGATGATATCGGTCGTCACTCGGCCGACTCGCTCCACGGAGCGATAAATCAGAATGTGCTGCAAGCTTACCGAGCCTG
CGAAGGCAATGTCAGCCAATGTGCTAAGCGTTTAGGTATTAGCCGTAATGCCTTGTATCGCAAATTAAAGCAGCTTGGGA
TTAAAGATTAA

Upstream 100 bases:

>100_bases
ATAGGGCATTCAAGGAAAGAAAGATGCCCAATAGTCATTTTGTCATTCAGTGGCACACTGCAACTGTGCCGAAGCGGAAC
ACTGCTCGGGGAGCACGGCT

Downstream 100 bases:

>100_bases
GTTTGCCAACCCGCTTTAACTGTAGCGTCTCGTTTGCACCATGTGAGCCCGATAGCTGCAGCTATCGGGCTTGTATTTTA
GGTGGGTAAACTGATATTGA

Product: sigma-54 dependent transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>616_residues
MTAKPHFPTIQPWLADSWQRSIGAGLSEFHAADDLRLSHADLKHKHEQYQQLIELVQSHALPLFNQLMAQSNSRLLLSDA
DGYVLKHWGVSRYSSKLADVALDIGVNWLEQYKGTNAIGTALMAKQAVSVVGEQHFIRQNRFMSCTACPIFSPQGEMLGV
LDITSEQQRHSQQTLMLVSSLAQQVETALLCHLPDSHYRIDLAAEPSLLSSGWQGIVIADSEGRIVGCNPMAKQLLSQAK
LGDSLELHLGDSWTRAGGFHRDLALHLHTQALGVTQTKSAKTIQDKPQSQLGVRFRDPLLERAWQQANKVITKQIPLLVL
GETGVGKEQFVKKLHAQSSRRAQPLVAVNCAALPAELVESELFGYQAGAFTGANRSGFIGKIRQAHGGFLFLDEIGEMPQ
AAQSRLLRVLQEREVVPVGSNQSVKVDIQIIAATHMDLESLVAQGLFRQDLFYRLNGLQVRLPALRERQDIERIIHKLHR
RHRSGPQTLCTELLGQLMRYDWPGNLRELDNLMQVACLMAEDDEVLARAHLPEHLAKKLVNKPLAVYERQHVENPQNPRD
KDDIGRHSADSLHGAINQNVLQAYRACEGNVSQCAKRLGISRNALYRKLKQLGIKD

Sequences:
NA

Specific function: NA

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA