Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is rtxB

Identifier: 24375800

GI number:

Start: 4503564

End: 4505744

Strand: Direct

Name: rtxB

Synonym: SO_4318

Alternate gene names: NA

Gene position: NA

Preceding gene: 24375799

Following gene: 24375801

Centisome position: NA

GC content: NA

Gene sequence:

>2181_bases
GTGCCTGTTACAGCGTCTGAAAAGGTTGAGCAGTGGACAATTTCTGCATCACAGCGAGTTATTGTTGACCCACTGCTAGA
TTGTTTAGTGCTTCTTACTGAACATTTTGGTAATCCATGCTCAAGTGATTCACTTGCGGCGGGCTTGCCTTTGTCTGGAG
CAGTGTTAACACCCGATCTGCTTCCACAAGCAGCATCTCGAGCAGGGTTAGCGGCAAAATTATCTCGTAAAGGCTTAAAT
GAGATATCGCCAATATTGCTACCTTGTATTTTGTTATTAAAAGATAAGAAAGCCTGTATTCTGCGAGAATTTGACCTCGA
ATCTGACCGTGCAGTCATCCAACTTCCTGAGACTGGCGGGGAAGAAATACTCACAATAGAATCGCTTGAAACTCTGTATG
TGGGCTATCTATTCCTCGTTAAGCAAGAATATCGTGGCGACATGGGGTTCGATGTCTATTTACACGACAATAAAACTCAC
TGGTTAGTCCAAACCTTAAAGGACTCTGCCCCAATTTACCGTGATGCTTTAATTGCCTCGGTTCTCGTGAATATTTTCGC
GTTAGTCTCGCCGCTGTTTATCATGAATGTGTACGATAAAGTTGTACCTAACCTTGCATTTGACTCCCTGTGGGTGTTAG
CGATTGGTGCCTCTATTGCCTATTTATTTGACCTTGTTATGCGGCAATTAAGAAGCTACTTAATTGATGTGGCAGGTAAA
AAAGTAGATATCATCGTATCATCTCGCCTCTTTGCCAAAGCAATTGGCATACCGCTTGAAAAACGCTCGCCCAGCATCGG
CGGGATGGCTAAACAACTGGGTGAATTTGATAGCATCCGAGAAATTTTAACCTCAGCCACCATAACGACCTTAGTCGATC
TGCCCTTTGCGCTCTTTTTCCTGATCGTGATTTATATTGTTGCTGGCGATTTAGCGGTGATACCTGTGGTTGGCGGTATG
ATCATCATTGGCTTTACACTCTATACCCAACCCAAATTAAAAGCGGCGATTGAGGAAGGTAATAAGTTTTCCAGCTTAAA
ACACGGGCATTTGATTGAGAGCCTATCTGCACTTGAGTCGATTAAAGCCAACGGCGCTGAAGGAATTGTTCAAAAAAGCT
GGCAACAGATGATCGGCCACAGTGCAAACTGGCAATTAAAATCCAAAAAACTCTCAAATTCCGTATCGAATACTGCCAAT
TTTATCGTGCAATTTACCGTAGTATGCGTGGTTATTTTAGGGGTTTACCGCGTTTCAGATAACCTAATTTCCATGGGTGG
GATCATTGCTGCGGTAATGTTATCAAGCCGCGCCATTGCACCAATGGCACAGTTAGCTGGATTAATGACGCGGGCCAACC
ATACTGCCAGCGCACTGCGCCAGCTCAATGAGTTAATGCTGCAAGAAGACGAGTTTGAAAATAAAGGCCACTTAGTCAGT
AAACAGCGTTTAATAGGCAAAATAAACGCCGACCACGTTGGATTTAGTTATCCAGGCTCTGAAAAACCCGTGCTTCACCC
GCTCTCATTAACCATCAATCCAGGTGAGCGTATTGCGATTATCGGCCGCAATGGTTCTGGTAAGAGTACCTTAGCCAAAC
TTCTCGTCGGACTCTTCCAACCAACAACTGGTAGCCTACGTTACGATGGTGTCGATTCGGCGCAAATTCATCCTAGCGAT
CTACGCCGTAATTTTGGTTATTTGCCGCAGGATGTCACCCTATTTCATGGCACGATCAGAGATAACATTCTCTTTGGTAC
TCGCCAAGTGACAGAGCATCAGCTTATCCGTGCGGTGCAGCTTTCAGGTGTCAGTCAATTTACGCACTTGGAAGCTGAAG
GCCTAGATCAACAGGTTGGTGAAGGTGGAATGTCTCTTAGCCGCGGACAACGGCAAACCGTCGCCCTTGCCCGAGCGACC
CTTAATGACCCACCCGTATTGTTGATGGATGAGCCTACTGCGAGTTTAGATGCTCGGGCAGAACAACAGTTTATTCGCTC
AATGCAAAATGTCAGCAAGGATAGAACTCTGCTGCTAATCACTCACAAAATGCATTTATTACAATTGGTTGACCGTATTA
TTGTGCTTGAAAGGGGCCATGTTGTTGCTGATGGTCCTAAAGCTGAAGTGTTGGAAAAACTCAATTTTGGCCTTGTTAAC
GGAGGCGCTAAAAATGAGTAA

Upstream 100 bases:

>100_bases
TAATCTGACATCAATTATTCCCATGATGGCCTATAGAAATATCGGCCATCGTGGTGGATACTTGTAGGAATCATAATAAA
ATCAAAGGATAGTTAATTAG

Downstream 100 bases:

>100_bases
AAACCTAACGGCAAATGATTTAGACATGGTTGATGACGTTTATGGCGCCATGATGACAGATGCACCTAGTGGGCATAGGC
TCATCATATGGGCTTTAGCC

Product: toxin secretion ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>726_residues
MPVTASEKVEQWTISASQRVIVDPLLDCLVLLTEHFGNPCSSDSLAAGLPLSGAVLTPDLLPQAASRAGLAAKLSRKGLN
EISPILLPCILLLKDKKACILREFDLESDRAVIQLPETGGEEILTIESLETLYVGYLFLVKQEYRGDMGFDVYLHDNKTH
WLVQTLKDSAPIYRDALIASVLVNIFALVSPLFIMNVYDKVVPNLAFDSLWVLAIGASIAYLFDLVMRQLRSYLIDVAGK
KVDIIVSSRLFAKAIGIPLEKRSPSIGGMAKQLGEFDSIREILTSATITTLVDLPFALFFLIVIYIVAGDLAVIPVVGGM
IIIGFTLYTQPKLKAAIEEGNKFSSLKHGHLIESLSALESIKANGAEGIVQKSWQQMIGHSANWQLKSKKLSNSVSNTAN
FIVQFTVVCVVILGVYRVSDNLISMGGIIAAVMLSSRAIAPMAQLAGLMTRANHTASALRQLNELMLQEDEFENKGHLVS
KQRLIGKINADHVGFSYPGSEKPVLHPLSLTINPGERIAIIGRNGSGKSTLAKLLVGLFQPTTGSLRYDGVDSAQIHPSD
LRRNFGYLPQDVTLFHGTIRDNILFGTRQVTEHQLIRAVQLSGVSQFTHLEAEGLDQQVGEGGMSLSRGQRQTVALARAT
LNDPPVLLMDEPTASLDARAEQQFIRSMQNVSKDRTLLLITHKMHLLQLVDRIIVLERGHVVADGPKAEVLEKLNFGLVN
GGAKNE

Sequences:
NA

Specific function: NA

COG id: COG2274

COG function: function code V; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA