Definition | Shewanella oneidensis MR-1, complete genome. |
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Accession | NC_004347 |
Length | 4,969,803 |
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The map label for this gene is apbE
Identifier: 24372693
GI number:
Start: 1152199
End: 1153242
Strand: Direct
Name: apbE
Synonym: SO_1109
Alternate gene names: NA
Gene position: NA
Preceding gene: 24372692
Following gene: 24372694
Centisome position: NA
GC content: NA
Gene sequence:
>1044_bases ATGTTTAAAACCCTAGCGTTAAAAACCTCAATGTTTAAGCATTCAGTTAGCTGGCTGGTCCTTGTAGGTCTGGCCTTTTT TATTTCAGCCTGTAGCAAACAGGATGAGGTTATTTCCCTTGCGGGCAGCACAATGGGAACGACTTACCACATTAAAGTGG TTCCCAATGAGCATATGCCGACAGCCCAACTATTGCAGGCTGAAATTGACTTAGCCCTAGAACAAGTCAATAACCAAATG TCGACCTATCGTCCTAATTCCGAGCTTTCCCGTTTCAATCAATTACCGCTAGAGCAGAGTGTGGAAGTCTCTCCCGATAC CATTAAGGTAGTTAGAGAAGGTATGCGTTTATATGACGTTACCGATAAAGCGTTAGATATTACCTTAGGTCCTTTAGTTA ATCTGTGGGGTTTTGGACCTGATAAGCGCCCGACAAAAGTACCGAGTCAAGCCGAGATTGATGCAGCTAAGGCCAAAACG GGTATTCGTGAACTGTCTATCGAAGGCAATCTTTTACGTAAACATAATGCACACTTGTATGTGGATTTATCGTCAATCGC TAAGGGCTTTGGTGTTGATAAAGTTGCTTCGATTTTAGATAAGTATCAAGCAACGGGTTACTTAGTTGAAATCGGTGGCG AGCTGAGCATTAAAGGCACTAAAGGCGATGCTAGCTCATGGCGTGTGGCAATAGAGAAGCCGACCGATGAAGGTATAGCT GTGCAGCAGGTGATTGAACCTGGCACTATGTCTATGGCAACGTCGGGAGATTATCGCAATTATTATGAGGAAGCAGGCCA ACGTTTTACGCATATAATTGATCCGCGTACCGGTTTGCCTATCAATCATAAGCTAGCATCTGTCACCGTTTTGCATAACG AATGCATGACGGCAGATGGTTTTGCGACGGCAATGATGGTTTTGGGTACAGAAGCATCATTGGAGCTTGCCAAGAAGGAA CACTTGGCGATAATGCTAATAGAAAAGCAAGGTGAAGGATTTAAAGTCTACTACAGCGACGCCTTCAAGCCTTTCCTTAA GTAG
Upstream 100 bases:
>100_bases ATGTGAATTAGCCCAAGGTAAAATGAGTTGCAGATGTGGAGTAGAGCTCTCATCTGCAACTTTTGCATTAAAGGGCATAC ATAAAGAGTTGTTAGTCACT
Downstream 100 bases:
>100_bases TCGGAGTTTACATGAGCACTTTTATCGCGGCATTTGTGATTTTATTACTGTTCTTTTTGCTTATGTCGATAGGTTATCTC ATCAAGCGCAAAGCCGTAGA
Product: thiamin biosynthesis lipoprotein ApbE
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>347_residues MFKTLALKTSMFKHSVSWLVLVGLAFFISACSKQDEVISLAGSTMGTTYHIKVVPNEHMPTAQLLQAEIDLALEQVNNQM STYRPNSELSRFNQLPLEQSVEVSPDTIKVVREGMRLYDVTDKALDITLGPLVNLWGFGPDKRPTKVPSQAEIDAAKAKT GIRELSIEGNLLRKHNAHLYVDLSSIAKGFGVDKVASILDKYQATGYLVEIGGELSIKGTKGDASSWRVAIEKPTDEGIA VQQVIEPGTMSMATSGDYRNYYEEAGQRFTHIIDPRTGLPINHKLASVTVLHNECMTADGFATAMMVLGTEASLELAKKE HLAIMLIEKQGEGFKVYYSDAFKPFLK
Sequences:
NA
Specific function: NA
COG id: COG1477
COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA