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The map label for this gene is yicC [C]

Identifier: 239618214

GI number: 239618214

Start: 1980790

End: 1981662

Strand: Reverse

Name: yicC [C]

Synonym: Kole_1850

Alternate gene names: 239618214

Gene position: 1981662-1980790 (Counterclockwise)

Preceding gene: 239618215

Following gene: 239618213

Centisome position: 86.08

GC content: 39.63

Gene sequence:

>873_bases
ATGATTAGAAGTATGACAGGATTCGCAAGAGCAGAGGAAGAAAAAGGCGGAATACTATGTTCCGTTGAATTAAAGAGCGT
TAACTCTAAACACCTGAACATTGATGTAAACACAGGTGGAAGATTCACCGAACTCGAAATCAAAGCCTCCAGATTCTTGA
GAGATCACCTCAGAAGGGGAACAATCAAAGCATACATAGATATTCTGTTCATGGATCAGGCCGATGTAATTCAACCAGAT
ATGGGAATGGCAAGCGCTTATTACAGAGCTTTAAATCAACTCGCTGATAAATTCAAAATTGCTGACAGGATAAGTCTCGA
TGTAATGACGAAAATGAAAGATATATTGAGGTACAAAGTCTCTCCAGAGTTGATGGAAAAAATATGGGACTGTGCTAAGA
TCGCTCTGGGAAAAGCGGTGACGGACTTAAACAAAGACAAAGAACGAGAAGGCGAAAACCTTTCTCAAGCCATACGCTCC
TATCTCACCAGTTTGAGACAAATAGCAAATTCTCTAAAAGAGGAATCCAAAGGATTTCTGGAATTTTATCGTGAACAGCT
CAAAAAGAGAGTGGAAGAAATTCTCAATTTTGAAGCTGATAAGAATAGATTGGAGCAGGAAGTGGTAATCCTCGCTGAAC
GCGCCGATATATCTGAGGAGATAGTAAGACTATTCTCACACATAGATTCCTTCGAAAAGCTTCTCGATAAAGATGGCGAA
TGTGGTATTCAACTTGATTTCCTCTGTCAGGAAATGCATCGCGAATTTTCTACCATAGCGGCTAAATCAAAGAAACTGTC
CATAACATCTCTTTCAATCGAAGGACGTACGTTGGTAAATAAAATCAGAGAACAGGTGCAAAACATAGAGTAG

Upstream 100 bases:

>100_bases
TTTGTCAATGTCCTAAAGAAACTGGCCGCCGCTTTGAAATTTTGACTCTAAACGGGTATAATTGTTCACAGTCAGATATA
ATTCTCTTTGAGGTGATCTA

Downstream 100 bases:

>100_bases
GAGGTGCAGAGAGTGTACGGACTTATCAATGTTGGGTTTGGAAACGTAATCATTGGGGATCGTGTTATAGCGATTGTTAA
CCCTGAATCAGCTCCCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MIRSMTGFARAEEEKGGILCSVELKSVNSKHLNIDVNTGGRFTELEIKASRFLRDHLRRGTIKAYIDILFMDQADVIQPD
MGMASAYYRALNQLADKFKIADRISLDVMTKMKDILRYKVSPELMEKIWDCAKIALGKAVTDLNKDKEREGENLSQAIRS
YLTSLRQIANSLKEESKGFLEFYREQLKKRVEEILNFEADKNRLEQEVVILAERADISEEIVRLFSHIDSFEKLLDKDGE
CGIQLDFLCQEMHREFSTIAAKSKKLSITSLSIEGRTLVNKIREQVQNIE

Sequences:

>Translated_290_residues
MIRSMTGFARAEEEKGGILCSVELKSVNSKHLNIDVNTGGRFTELEIKASRFLRDHLRRGTIKAYIDILFMDQADVIQPD
MGMASAYYRALNQLADKFKIADRISLDVMTKMKDILRYKVSPELMEKIWDCAKIALGKAVTDLNKDKEREGENLSQAIRS
YLTSLRQIANSLKEESKGFLEFYREQLKKRVEEILNFEADKNRLEQEVVILAERADISEEIVRLFSHIDSFEKLLDKDGE
CGIQLDFLCQEMHREFSTIAAKSKKLSITSLSIEGRTLVNKIREQVQNIE
>Mature_290_residues
MIRSMTGFARAEEEKGGILCSVELKSVNSKHLNIDVNTGGRFTELEIKASRFLRDHLRRGTIKAYIDILFMDQADVIQPD
MGMASAYYRALNQLADKFKIADRISLDVMTKMKDILRYKVSPELMEKIWDCAKIALGKAVTDLNKDKEREGENLSQAIRS
YLTSLRQIANSLKEESKGFLEFYREQLKKRVEEILNFEADKNRLEQEVVILAERADISEEIVRLFSHIDSFEKLLDKDGE
CGIQLDFLCQEMHREFSTIAAKSKKLSITSLSIEGRTLVNKIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=296, Percent_Identity=29.3918918918919, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33365; Mature: 33365

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSMTGFARAEEEKGGILCSVELKSVNSKHLNIDVNTGGRFTELEIKASRFLRDHLRRG
CCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHC
TIKAYIDILFMDQADVIQPDMGMASAYYRALNQLADKFKIADRISLDVMTKMKDILRYKV
HHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPELMEKIWDCAKIALGKAVTDLNKDKEREGENLSQAIRSYLTSLRQIANSLKEESKGFL
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFYREQLKKRVEEILNFEADKNRLEQEVVILAERADISEEIVRLFSHIDSFEKLLDKDGE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
CGIQLDFLCQEMHREFSTIAAKSKKLSITSLSIEGRTLVNKIREQVQNIE
CCEEHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSMTGFARAEEEKGGILCSVELKSVNSKHLNIDVNTGGRFTELEIKASRFLRDHLRRG
CCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHC
TIKAYIDILFMDQADVIQPDMGMASAYYRALNQLADKFKIADRISLDVMTKMKDILRYKV
HHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPELMEKIWDCAKIALGKAVTDLNKDKEREGENLSQAIRSYLTSLRQIANSLKEESKGFL
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFYREQLKKRVEEILNFEADKNRLEQEVVILAERADISEEIVRLFSHIDSFEKLLDKDGE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
CGIQLDFLCQEMHREFSTIAAKSKKLSITSLSIEGRTLVNKIREQVQNIE
CCEEHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]