| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is ypwA [H]
Identifier: 239618197
GI number: 239618197
Start: 1960660
End: 1962162
Strand: Reverse
Name: ypwA [H]
Synonym: Kole_1833
Alternate gene names: 239618197
Gene position: 1962162-1960660 (Counterclockwise)
Preceding gene: 239618198
Following gene: 239618196
Centisome position: 85.23
GC content: 41.52
Gene sequence:
>1503_bases GTGGACGCCTTGGAAAAACTAAAAGCATTGTCTAAAGAGTTGGAACTCATTAATGCAGCCGTTGCAACAATGGCCTGGGA CCAGAGAACCTACATGCCACCAAAAAGTGCCGGAACAAGATCAGAAGCAATCGGATACCTTTCTACGATAGCTTTCAAAA AATTCATATCGGACGAAACGGGTGAAATAATCAGGGAACTCGAAAAAGAAGATAACTTCAACCGTTTAGACGAAAACGAA AAAGCAATGGTCAGAATCGCAAAGCGGGAATATGAAAAAGCAAAAGCCATTCCGCCGGAACTCTTTCAGAAATTCACCAT TACCGCTTCAAAGAGCGAAACCGTCTGGGAACAGGCAAAGAAAAACAACGATTTCAAAAGCTTCCAACCCTATCTTGAAG AACTCCTTGAAATGTTGCGCGAAATGGCAGAACTCTACGGTTATAAAGAAAATCCTTATGATGCTCTATTAGATAAATAT GAACCGGGGATAACAACCAGAAAACTAAAGAAAATCATAGAGACATTGAAAGCGGAACTCATCCCATTCCTACGGGAAAT AATTGAACAGAAAGGAAAAACCGATCCTTCAATTCTATACGGCCGATTCGGGAAAAAGGCACAGGAAAAACTTTCTATAA GAGCACTCAAAGCTATCGGGTATGATTTTGAAGCCGGCCGCCTGGATGAAACCGTTCATCCATTTACCATAAGCCTTGGT GCCGGCGATGTAAGAGTCACCACAAAGTATGATCCGCACTTTCTACAACCGTCTCTGTACGGGACATTCCATGAAGGCGG TCACGCGCTATACGAACAAGGACTTCCTGAAGAGTTCAAATATACTCCCATATATGGAGCAGTATCTCTAGGAATCCACG AATCTCAATCCCGAATGATGGAGAATATGGTCGCACGAAGCTACGAATTTCTCAAATTCTTCTATCCTGAAATAAAAAAG GTTTTCCCGAAACAATTTGGAAGGGTTTCGCTGGACAGATTCTACCGTGCCATAAACCACGTTGAACCCTCACTCATCCG TATCGAAGCCGATGAAGTTACCTACAACTTCCACATAATGCTCAGATTCGAACTGGAAGAGGCGATGCTAAACAAATCCC TTGAAGTTAAAGACCTCCCAAGAGCGTGGAACGAAAAGATCAAAGAATATCTTGGAATAGAACCTCAGAATGATGCCGAA GGTGTCCTTCAAGATGTTCATTGGGCCAATGGAATGATAGGATATTTCCCATCCTATATGTTGGGTAACCTTTACGCGGC GCAACTCTTTGCCAAAGCCGAAGAAGAAATCCCAAAACTCAGAAAAAACATTGAGAAAGGAAACGTCGCTGTTCTCATAG AATGGTTGCGGGAAAACATTCATCGTCATGGAAAAAAATATCTTCCTGAAGAGCTCATCAAAATCAGTACAGGTGAAGAA TTAAATCCCGAATATTTTATTCGCTATATAAAAGAAAAATACACAAAGATATACGAGATATAA
Upstream 100 bases:
>100_bases GAGCGTAGATTAAATTGTACAAAACCTAATCATTCACCACACCGAATCATATCTTCTAAACTTTTCACACCGAATCAAAT GATTCAAAGGAGGGAAATGA
Downstream 100 bases:
>100_bases GTCTATTTAAGAAACAAAGCCCGTTATAATTATTAAATATTGTCCGGTAGGGCATAAAAAATGTTAGTATTTGTTGTGCC CTACCGGCTATTTTCTTATG
Product: Carboxypeptidase Taq
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDETGEIIRELEKEDNFNRLDENE KAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAKKNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKY EPGITTRKLKKIIETLKAELIPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMMENMVARSYEFLKFFYPEIKK VFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIMLRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAE GVLQDVHWANGMIGYFPSYMLGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE LNPEYFIRYIKEKYTKIYEI
Sequences:
>Translated_500_residues MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDETGEIIRELEKEDNFNRLDENE KAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAKKNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKY EPGITTRKLKKIIETLKAELIPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMMENMVARSYEFLKFFYPEIKK VFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIMLRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAE GVLQDVHWANGMIGYFPSYMLGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE LNPEYFIRYIKEKYTKIYEI >Mature_500_residues MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDETGEIIRELEKEDNFNRLDENE KAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAKKNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKY EPGITTRKLKKIIETLKAELIPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMMENMVARSYEFLKFFYPEIKK VFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIMLRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAE GVLQDVHWANGMIGYFPSYMLGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE LNPEYFIRYIKEKYTKIYEI
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: NA
Molecular weight: Translated: 58242; Mature: 58242
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDET CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH GEIIRELEKEDNFNRLDENEKAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAK HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHH KNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKYEPGITTRKLKKIIETLKAEL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH IPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG HHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMM CCCEEEEEECCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHH ENMVARSYEFLKFFYPEIKKVFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEEEEEEE LRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAEGVLQDVHWANGMIGYFPSYM EEEEHHHHHHCCCCCHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH LGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC LNPEYFIRYIKEKYTKIYEI CCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDET CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH GEIIRELEKEDNFNRLDENEKAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAK HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHH KNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKYEPGITTRKLKKIIETLKAEL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH IPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG HHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMM CCCEEEEEECCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHH ENMVARSYEFLKFFYPEIKKVFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEEEEEEE LRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAEGVLQDVHWANGMIGYFPSYM EEEEHHHHHHCCCCCHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH LGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC LNPEYFIRYIKEKYTKIYEI CCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]