Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

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The map label for this gene is ypwA [H]

Identifier: 239618197

GI number: 239618197

Start: 1960660

End: 1962162

Strand: Reverse

Name: ypwA [H]

Synonym: Kole_1833

Alternate gene names: 239618197

Gene position: 1962162-1960660 (Counterclockwise)

Preceding gene: 239618198

Following gene: 239618196

Centisome position: 85.23

GC content: 41.52

Gene sequence:

>1503_bases
GTGGACGCCTTGGAAAAACTAAAAGCATTGTCTAAAGAGTTGGAACTCATTAATGCAGCCGTTGCAACAATGGCCTGGGA
CCAGAGAACCTACATGCCACCAAAAAGTGCCGGAACAAGATCAGAAGCAATCGGATACCTTTCTACGATAGCTTTCAAAA
AATTCATATCGGACGAAACGGGTGAAATAATCAGGGAACTCGAAAAAGAAGATAACTTCAACCGTTTAGACGAAAACGAA
AAAGCAATGGTCAGAATCGCAAAGCGGGAATATGAAAAAGCAAAAGCCATTCCGCCGGAACTCTTTCAGAAATTCACCAT
TACCGCTTCAAAGAGCGAAACCGTCTGGGAACAGGCAAAGAAAAACAACGATTTCAAAAGCTTCCAACCCTATCTTGAAG
AACTCCTTGAAATGTTGCGCGAAATGGCAGAACTCTACGGTTATAAAGAAAATCCTTATGATGCTCTATTAGATAAATAT
GAACCGGGGATAACAACCAGAAAACTAAAGAAAATCATAGAGACATTGAAAGCGGAACTCATCCCATTCCTACGGGAAAT
AATTGAACAGAAAGGAAAAACCGATCCTTCAATTCTATACGGCCGATTCGGGAAAAAGGCACAGGAAAAACTTTCTATAA
GAGCACTCAAAGCTATCGGGTATGATTTTGAAGCCGGCCGCCTGGATGAAACCGTTCATCCATTTACCATAAGCCTTGGT
GCCGGCGATGTAAGAGTCACCACAAAGTATGATCCGCACTTTCTACAACCGTCTCTGTACGGGACATTCCATGAAGGCGG
TCACGCGCTATACGAACAAGGACTTCCTGAAGAGTTCAAATATACTCCCATATATGGAGCAGTATCTCTAGGAATCCACG
AATCTCAATCCCGAATGATGGAGAATATGGTCGCACGAAGCTACGAATTTCTCAAATTCTTCTATCCTGAAATAAAAAAG
GTTTTCCCGAAACAATTTGGAAGGGTTTCGCTGGACAGATTCTACCGTGCCATAAACCACGTTGAACCCTCACTCATCCG
TATCGAAGCCGATGAAGTTACCTACAACTTCCACATAATGCTCAGATTCGAACTGGAAGAGGCGATGCTAAACAAATCCC
TTGAAGTTAAAGACCTCCCAAGAGCGTGGAACGAAAAGATCAAAGAATATCTTGGAATAGAACCTCAGAATGATGCCGAA
GGTGTCCTTCAAGATGTTCATTGGGCCAATGGAATGATAGGATATTTCCCATCCTATATGTTGGGTAACCTTTACGCGGC
GCAACTCTTTGCCAAAGCCGAAGAAGAAATCCCAAAACTCAGAAAAAACATTGAGAAAGGAAACGTCGCTGTTCTCATAG
AATGGTTGCGGGAAAACATTCATCGTCATGGAAAAAAATATCTTCCTGAAGAGCTCATCAAAATCAGTACAGGTGAAGAA
TTAAATCCCGAATATTTTATTCGCTATATAAAAGAAAAATACACAAAGATATACGAGATATAA

Upstream 100 bases:

>100_bases
GAGCGTAGATTAAATTGTACAAAACCTAATCATTCACCACACCGAATCATATCTTCTAAACTTTTCACACCGAATCAAAT
GATTCAAAGGAGGGAAATGA

Downstream 100 bases:

>100_bases
GTCTATTTAAGAAACAAAGCCCGTTATAATTATTAAATATTGTCCGGTAGGGCATAAAAAATGTTAGTATTTGTTGTGCC
CTACCGGCTATTTTCTTATG

Product: Carboxypeptidase Taq

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDETGEIIRELEKEDNFNRLDENE
KAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAKKNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKY
EPGITTRKLKKIIETLKAELIPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG
AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMMENMVARSYEFLKFFYPEIKK
VFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIMLRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAE
GVLQDVHWANGMIGYFPSYMLGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE
LNPEYFIRYIKEKYTKIYEI

Sequences:

>Translated_500_residues
MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDETGEIIRELEKEDNFNRLDENE
KAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAKKNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKY
EPGITTRKLKKIIETLKAELIPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG
AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMMENMVARSYEFLKFFYPEIKK
VFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIMLRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAE
GVLQDVHWANGMIGYFPSYMLGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE
LNPEYFIRYIKEKYTKIYEI
>Mature_500_residues
MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDETGEIIRELEKEDNFNRLDENE
KAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAKKNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKY
EPGITTRKLKKIIETLKAELIPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG
AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMMENMVARSYEFLKFFYPEIKK
VFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIMLRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAE
GVLQDVHWANGMIGYFPSYMLGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE
LNPEYFIRYIKEKYTKIYEI

Specific function: Unknown

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: NA

Molecular weight: Translated: 58242; Mature: 58242

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDET
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
GEIIRELEKEDNFNRLDENEKAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAK
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHH
KNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKYEPGITTRKLKKIIETLKAEL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG
HHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMM
CCCEEEEEECCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHH
ENMVARSYEFLKFFYPEIKKVFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEEEEEEE
LRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAEGVLQDVHWANGMIGYFPSYM
EEEEHHHHHHCCCCCHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
LGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC
LNPEYFIRYIKEKYTKIYEI
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDALEKLKALSKELELINAAVATMAWDQRTYMPPKSAGTRSEAIGYLSTIAFKKFISDET
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
GEIIRELEKEDNFNRLDENEKAMVRIAKREYEKAKAIPPELFQKFTITASKSETVWEQAK
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHH
KNNDFKSFQPYLEELLEMLREMAELYGYKENPYDALLDKYEPGITTRKLKKIIETLKAEL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IPFLREIIEQKGKTDPSILYGRFGKKAQEKLSIRALKAIGYDFEAGRLDETVHPFTISLG
HHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
AGDVRVTTKYDPHFLQPSLYGTFHEGGHALYEQGLPEEFKYTPIYGAVSLGIHESQSRMM
CCCEEEEEECCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHH
ENMVARSYEFLKFFYPEIKKVFPKQFGRVSLDRFYRAINHVEPSLIRIEADEVTYNFHIM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEEEEEEE
LRFELEEAMLNKSLEVKDLPRAWNEKIKEYLGIEPQNDAEGVLQDVHWANGMIGYFPSYM
EEEEHHHHHHCCCCCHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
LGNLYAAQLFAKAEEEIPKLRKNIEKGNVAVLIEWLRENIHRHGKKYLPEELIKISTGEE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC
LNPEYFIRYIKEKYTKIYEI
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]