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The map label for this gene is 239618041

Identifier: 239618041

GI number: 239618041

Start: 1804158

End: 1805342

Strand: Reverse

Name: 239618041

Synonym: Kole_1670

Alternate gene names: NA

Gene position: 1805342-1804158 (Counterclockwise)

Preceding gene: 239618049

Following gene: 239618040

Centisome position: 78.42

GC content: 39.66

Gene sequence:

>1185_bases
ATGAAAAATGTGGTGGAAGATTATTCAAAAAGGTACAGAAAAGCTCGCAAAAAAGAAAAATCCGAGATTCTAGATGAATT
CACCCGAGTTACCAAGTATAATCGTAGTTACGCATCGTTTTTACTACGAGGAGCCTTGAAAAAGCGAAAGACAACCTCAC
CCAGCAAGAAAAAAGGCCGAAAGAAAAAATATGATCGTAAAGTCTTCGTGAAACTCGTGAAGATATGGGAGATAATGGAT
TTTCCGTGTGGTAAAAGGCTCGAAGCAGTGATGGACGAAGTAATAGATAATCTTGTTCGTAATGGGCATCTAACATTGAC
TGAAGAAACAAAGAGGAAGCTTCTTAATATAAGTGCTTCCACTATCGATAGATTGTTAACCAGCGAGAGGAAAAAGATGG
AACTCAAAGGACGATCTCATACAAAACCCGGAACTCTTCTGAAAAAGCACATACGAATAAAAACACATTACGAGTGGGAC
GATACAAGACCAGGCTTTGTTGAGATTGATCTCGTTGGGCATGATGGCGGGAGTGTAAGTGGTGATTTTTGCTACAGCCT
CAACATGGTAGATGTAGCAAGTGGTTGGAGTGTAGTGGCACCAATAAGAAACAAAGCGCAAATCTGGACATTAAAAGCTA
TAATTCAGTTGAGGAAAACGCTTCCTTTCACTTTATTAGGTATTCACTCAGATAACGGATCAGAATTCATTAACAGACAC
CTATACCGTTATTGTGAAGATGAAGGGCTTCTATTCACCAGAACCCGGAGTTACAACAAGAATGATAATTGTCATGTCGA
ACAAAAGAACTGGTCTGTTGTAAGAAGAGCCGTTGGATATTACAGATACGATACAGAGGAAGAATTCCAAATACTGAAGG
AGTTGTACGCGTCGCTGAATCTGTACAATAATCATTTTCAGCCAAATCAGAAAATCGTTGAGAAAATTAGAAAAGGAAAC
AAGGTAAGCAAGAAATACGACCGTCCTACTACACCATACGAAAGGATCATGCGATCTCCCTGGGTTGACCAAGATAAAAA
AGACAGGCTTCGCAGACAACACGAAGCCCTAGACATTTACAAACTCAAGAGTATAATAACACATTTGCAAGAGCAATTAC
TGAGCATCCAGATTGACAAATCGAAAGGAGGGATCCTCAACTATGTCCCTCTCAATTTCAAGTAG

Upstream 100 bases:

>100_bases
TCGAAAAGGGAACGTTGCGTCAAAAATAAATCTACTCGAAAAAGAGGGATAATCTTCTCGAATACCAAAGAAGGTAGGCG
AGAAGATGAAGAGGTTAGAT

Downstream 100 bases:

>100_bases
ATTCTATTTTGAGGCATCCAATCTATTTCAAGTAGATTTATTTTTGAGGCATTACGGTAACTTTTCTGTTTCTAAAGCCT
TTTACAAAAATTGAAATCCT

Product: Integrase catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKNVVEDYSKRYRKARKKEKSEILDEFTRVTKYNRSYASFLLRGALKKRKTTSPSKKKGRKKKYDRKVFVKLVKIWEIMD
FPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISASTIDRLLTSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWD
DTRPGFVEIDLVGHDGGSVSGDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
LYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLNLYNNHFQPNQKIVEKIRKGN
KVSKKYDRPTTPYERIMRSPWVDQDKKDRLRRQHEALDIYKLKSIITHLQEQLLSIQIDKSKGGILNYVPLNFK

Sequences:

>Translated_394_residues
MKNVVEDYSKRYRKARKKEKSEILDEFTRVTKYNRSYASFLLRGALKKRKTTSPSKKKGRKKKYDRKVFVKLVKIWEIMD
FPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISASTIDRLLTSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWD
DTRPGFVEIDLVGHDGGSVSGDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
LYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLNLYNNHFQPNQKIVEKIRKGN
KVSKKYDRPTTPYERIMRSPWVDQDKKDRLRRQHEALDIYKLKSIITHLQEQLLSIQIDKSKGGILNYVPLNFK
>Mature_394_residues
MKNVVEDYSKRYRKARKKEKSEILDEFTRVTKYNRSYASFLLRGALKKRKTTSPSKKKGRKKKYDRKVFVKLVKIWEIMD
FPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISASTIDRLLTSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWD
DTRPGFVEIDLVGHDGGSVSGDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
LYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLNLYNNHFQPNQKIVEKIRKGN
KVSKKYDRPTTPYERIMRSPWVDQDKKDRLRRQHEALDIYKLKSIITHLQEQLLSIQIDKSKGGILNYVPLNFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 46498; Mature: 46498

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVVEDYSKRYRKARKKEKSEILDEFTRVTKYNRSYASFLLRGALKKRKTTSPSKKKGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHCH
KKKYDRKVFVKLVKIWEIMDFPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISAS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCHH
TIDRLLTSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWDDTRPGFVEIDLVGHDGGSVS
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCCC
GDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
CCEEEEECEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
LYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLN
HHHHHCCCCEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LYNNHFQPNQKIVEKIRKGNKVSKKYDRPTTPYERIMRSPWVDQDKKDRLRRQHEALDIY
HHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KLKSIITHLQEQLLSIQIDKSKGGILNYVPLNFK
HHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MKNVVEDYSKRYRKARKKEKSEILDEFTRVTKYNRSYASFLLRGALKKRKTTSPSKKKGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHCH
KKKYDRKVFVKLVKIWEIMDFPCGKRLEAVMDEVIDNLVRNGHLTLTEETKRKLLNISAS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCHH
TIDRLLTSERKKMELKGRSHTKPGTLLKKHIRIKTHYEWDDTRPGFVEIDLVGHDGGSVS
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCCC
GDFCYSLNMVDVASGWSVVAPIRNKAQIWTLKAIIQLRKTLPFTLLGIHSDNGSEFINRH
CCEEEEECEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
LYRYCEDEGLLFTRTRSYNKNDNCHVEQKNWSVVRRAVGYYRYDTEEEFQILKELYASLN
HHHHHCCCCEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LYNNHFQPNQKIVEKIRKGNKVSKKYDRPTTPYERIMRSPWVDQDKKDRLRRQHEALDIY
HHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KLKSIITHLQEQLLSIQIDKSKGGILNYVPLNFK
HHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]