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The map label for this gene is rex

Identifier: 239617930

GI number: 239617930

Start: 1671452

End: 1672096

Strand: Reverse

Name: rex

Synonym: Kole_1558

Alternate gene names: 239617930

Gene position: 1672096-1671452 (Counterclockwise)

Preceding gene: 239617957

Following gene: 239617929

Centisome position: 72.63

GC content: 41.4

Gene sequence:

>645_bases
GTGCCAGAAGAAAAAATCCCTCGCCCTACTATAAAAAGACTCGCAATTTATTACAGGTGCCTTGAAAAACAACTTTTACA
GGAAAAAAATAGCATTTCTTCGAAAGAGATAGGTGAACTCCTTGGAATAAAAGCAAGTCAGGTCAGAAAAGATCTCTCTT
ATTTTGGAGAGTTCGGGAAACGTGGGGTAGGATACGACACTAAAAAACTCTTGGAAGGTATCGGTGAGATACTGGGAATA
AAGAAGGAATGGGACACCTGTATCGTCGGAGCAGGTAATCTGGGTGTTGCCATTGCTAATTATCCGGGATTAACCAAAAG
CGGTTTTTTTGTCAAAGCCGTTTTTGATAATGATCCAAAGAAAATCGGTTCGGTACTGGCAAGCGGCATAATAATCGATG
ATATCCAGAGCATGCCGGAAGTCATCAAAAAGAGAAATATAACCATTGGAGTTATAACCGTACCCGCTTCTGAGGCACAG
AAAGTTGCTGATGCACTTGTTGACGCCGGGATTCTAGGTATAGTTAATTTTGCACCGACCAAGATAAGTGTCCCCAAAAA
TGTCCGGGTTGAAGAGATCGATATATCGGTCGTTTTTAGATCTCTCGCGTTTCATGTAAATATGTTACAGAAGGGAGAAT
GGTGA

Upstream 100 bases:

>100_bases
AAAATTCAAAGCCACAGTGACAACTGCACATTTCGTGATATAATTTCACAAACACGTATCTTCACCAACACCGTATAAAA
TTTTTTGAGGAGGGAATTTT

Downstream 100 bases:

>100_bases
TGAAACGCCCGATTCTCGTCGCTCTCGTAGGTGGGAGCGGAGCTGGAAAAACCTCTGTAGCAATGAAAATAAAGGAACAT
TTCAGCGATTGCGCAGATAT

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPEEKIPRPTIKRLAIYYRCLEKQLLQEKNSISSKEIGELLGIKASQVRKDLSYFGEFGKRGVGYDTKKLLEGIGEILGI
KKEWDTCIVGAGNLGVAIANYPGLTKSGFFVKAVFDNDPKKIGSVLASGIIIDDIQSMPEVIKKRNITIGVITVPASEAQ
KVADALVDAGILGIVNFAPTKISVPKNVRVEEIDISVVFRSLAFHVNMLQKGEW

Sequences:

>Translated_214_residues
MPEEKIPRPTIKRLAIYYRCLEKQLLQEKNSISSKEIGELLGIKASQVRKDLSYFGEFGKRGVGYDTKKLLEGIGEILGI
KKEWDTCIVGAGNLGVAIANYPGLTKSGFFVKAVFDNDPKKIGSVLASGIIIDDIQSMPEVIKKRNITIGVITVPASEAQ
KVADALVDAGILGIVNFAPTKISVPKNVRVEEIDISVVFRSLAFHVNMLQKGEW
>Mature_213_residues
PEEKIPRPTIKRLAIYYRCLEKQLLQEKNSISSKEIGELLGIKASQVRKDLSYFGEFGKRGVGYDTKKLLEGIGEILGIK
KEWDTCIVGAGNLGVAIANYPGLTKSGFFVKAVFDNDPKKIGSVLASGIIIDDIQSMPEVIKKRNITIGVITVPASEAQK
VADALVDAGILGIVNFAPTKISVPKNVRVEEIDISVVFRSLAFHVNMLQKGEW

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REX_KOSOT (C5CER8)

Other databases:

- EMBL:   CP001634
- RefSeq:   YP_002941252.1
- GeneID:   7968635
- GenomeReviews:   CP001634_GR
- KEGG:   kol:Kole_1558
- ProtClustDB:   PRK05472
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_01131
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00881

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N

EC number: NA

Molecular weight: Translated: 23446; Mature: 23315

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEEKIPRPTIKRLAIYYRCLEKQLLQEKNSISSKEIGELLGIKASQVRKDLSYFGEFGK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
RGVGYDTKKLLEGIGEILGIKKEWDTCIVGAGNLGVAIANYPGLTKSGFFVKAVFDNDPK
CCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCHH
KIGSVLASGIIIDDIQSMPEVIKKRNITIGVITVPASEAQKVADALVDAGILGIVNFAPT
HHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
KISVPKNVRVEEIDISVVFRSLAFHVNMLQKGEW
EECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEEKIPRPTIKRLAIYYRCLEKQLLQEKNSISSKEIGELLGIKASQVRKDLSYFGEFGK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
RGVGYDTKKLLEGIGEILGIKKEWDTCIVGAGNLGVAIANYPGLTKSGFFVKAVFDNDPK
CCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCHH
KIGSVLASGIIIDDIQSMPEVIKKRNITIGVITVPASEAQKVADALVDAGILGIVNFAPT
HHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
KISVPKNVRVEEIDISVVFRSLAFHVNMLQKGEW
EECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA