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The map label for this gene is hspC2 [H]

Identifier: 239617276

GI number: 239617276

Start: 933490

End: 933942

Strand: Reverse

Name: hspC2 [H]

Synonym: Kole_0885

Alternate gene names: 239617276

Gene position: 933942-933490 (Counterclockwise)

Preceding gene: 239617277

Following gene: 239617275

Centisome position: 40.57

GC content: 41.5

Gene sequence:

>453_bases
ATGTTGGTTCCAAAGAAGAACGTTTCTGAACTCTTCAGACCCTTTGAGGAAATTCAGAAAGAGATCGATAAGCTTTTCAG
CGAAGCCTTTAGAGGACTCGATGTAAGAAGAGGAGAGTACGGCATGCTCATCCCCGAAGTCGATATCTACGAAACGGACG
ATGCCATATTTGTGGAAATGGAAGTACCTGGCATAAAGAAGAAAGATCTCGAAATCAAAATTGAAGATGGAATCCTGACA
ATCAAAGGAGAGAAATCCTCTGAAAAAGATGACAAATCCAGAAACTACCATCTCTACGAGCGTTCCTATGGTATGTTCCA
GAGAGCTTTCAGATTGCCCGACAGTATCGATACGACCAAAGTTAAAGCAAAATACGAAGACGGCGTCCTGAAAATCGAAT
TGCCTAAGAAGGAAGAAGTCAAGAAAGAAACGGTAAGTGTGAAAGTTGAGTAA

Upstream 100 bases:

>100_bases
CCGGAAATCCTGGAGACCAAGGTGGAAATTCTGAGTACATACCACCGAAAGACAATGCCTAAAATGAATAAACTGAAAAT
TTTGTCGGGGAGGTGATAGC

Downstream 100 bases:

>100_bases
TTGAGATGAAATCATACGGGGCGCCTTTAAGGCGCCCTTTTTAAAACTGGAGGTGAGAGAATGATAAATTATGAAGAATA
CACGGAGAAGGCGAAAAAAA

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLVPKKNVSELFRPFEEIQKEIDKLFSEAFRGLDVRRGEYGMLIPEVDIYETDDAIFVEMEVPGIKKKDLEIKIEDGILT
IKGEKSSEKDDKSRNYHLYERSYGMFQRAFRLPDSIDTTKVKAKYEDGVLKIELPKKEEVKKETVSVKVE

Sequences:

>Translated_150_residues
MLVPKKNVSELFRPFEEIQKEIDKLFSEAFRGLDVRRGEYGMLIPEVDIYETDDAIFVEMEVPGIKKKDLEIKIEDGILT
IKGEKSSEKDDKSRNYHLYERSYGMFQRAFRLPDSIDTTKVKAKYEDGVLKIELPKKEEVKKETVSVKVE
>Mature_150_residues
MLVPKKNVSELFRPFEEIQKEIDKLFSEAFRGLDVRRGEYGMLIPEVDIYETDDAIFVEMEVPGIKKKDLEIKIEDGILT
IKGEKSSEKDDKSRNYHLYERSYGMFQRAFRLPDSIDTTKVKAKYEDGVLKIELPKKEEVKKETVSVKVE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17525; Mature: 17525

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVPKKNVSELFRPFEEIQKEIDKLFSEAFRGLDVRRGEYGMLIPEVDIYETDDAIFVEM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCEEEEEE
EVPGIKKKDLEIKIEDGILTIKGEKSSEKDDKSRNYHLYERSYGMFQRAFRLPDSIDTTK
ECCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEE
VKAKYEDGVLKIELPKKEEVKKETVSVKVE
EEEEECCCEEEEECCCHHHHHHHEEEEEEC
>Mature Secondary Structure
MLVPKKNVSELFRPFEEIQKEIDKLFSEAFRGLDVRRGEYGMLIPEVDIYETDDAIFVEM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCEEEEEE
EVPGIKKKDLEIKIEDGILTIKGEKSSEKDDKSRNYHLYERSYGMFQRAFRLPDSIDTTK
ECCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEE
VKAKYEDGVLKIELPKKEEVKKETVSVKVE
EEEEECCCEEEEECCCHHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA