| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yfiS [H]
Identifier: 239617193
GI number: 239617193
Start: 850120
End: 851406
Strand: Reverse
Name: yfiS [H]
Synonym: Kole_0800
Alternate gene names: 239617193
Gene position: 851406-850120 (Counterclockwise)
Preceding gene: 239617195
Following gene: 239617191
Centisome position: 36.98
GC content: 36.83
Gene sequence:
>1287_bases ATGTCTAGCTTGCAAACGAACTTTAGGCTTTATTATTTTGGAAGGTTAGTATCACTTCTTGGGAGTGGTATACAATCTCT TGCTCTGTCGCTTTACATATTGGATATCACAGGTTCTGGCGCTGCTATGGGTACTTTCTTGCTTATAAATATGCTACCAC GAATTGTCTTTGCTCCTTTAGCCGGGGTGTTCGGGGATAGACTAAACAGAAAATGGCTAATGGTATACCTCGATTTGTTC CGTGGTATTATCATCTTTCTTATGGCTTTTCTTGCCTTTAAGGAATCCATGGGAATTATTCTTATTTATGGCTTTCAACT GATTATTTCCACTATGGATATCTTCTTCGATCCTGTTACAAGAGCTATACTGCCAGATATAGTCCCAGAAAATAACCTTA CATCTGCAAACTCAATAGTTAATGCAACCGATAGCTTTAGTTACATTGTTGGTCCAATTCTTGGAGGCATTCTATATCCC CTTGGAATATGGCTCGTTTTTGTATTAAATGCCACGACCTTCGTTATATCCGGCATTAGCGAGATATTCATAAGTTATGA ACAGACAACAGTAAAAAAGAAAATAACCGTCAGACAAATTTGGGAAGACTTGAAAGATGGTGTCAATGCTTTCAAAAAAC TAGCAGGAGTACTTCGAATAATGATTTTCATAATGCTTACCAACTTTCTTATGGGACCAGTGATAATGCTTGTGATTCCA TATTTTGCTAGGGAAATCGTTGGATTCAATAGCTATCAATATGGAATTTTGAATGCTTCATGGCTTATCGGTATTACTGC GGGAAACATACTTCTTGTAATCATTGCTAAGAACAAAAGTATAAAAAGATTGTTCTTAACCGGTTTGTTTTTCCAATTAG TTCTTTTCTACACTTTCGACACTCTTACTTTTCCACGGATGATAAGCTTCTTTGGAGGACCAAGTTGGATATACCTTATA TTTATAGCAGGATTTTTCGTTGCCATGGGCTTCTTCAATGCTTTCATCAATACACCTGTTGGAGTATATTTCCAATTGGC AACCCCAACAGAACTTAGGACCCGTGTACTATCGGCAATCTCCCTTATCGCACAGATAAGCATGCCAATCGGTATGGCTG TTTACGGATTAATTGTAGATAAATATCCTGTACATTTAGTTATTTTTGGTTCACTTATTTTAACGACTCTTATCACACTG GTCTATCTCTTCACAAAAACTTTCGACTTTCTTGAAAGCAAACCAAAAACCGAAAATTCAATTGTTGAATCATCAGAAAC AGTTTGA
Upstream 100 bases:
>100_bases CATTTTCCAGAGACCAAGAAAAACTCTTTTGAAAATTGGTTAAATGAATTTCTAGATTTTAACCAAAAGAAATAAACAAA AATTCCGGGGGTGACAAAAA
Downstream 100 bases:
>100_bases GGATTTCAAATAAATCTCAAAAGTCTATTAATCAGCTTTTTCCTTTCCTTCTTTTTATCCAGCGCCCAGTAAGCGAGGGC AGTCTGGGTTTTCTTTAGCC
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSSLQTNFRLYYFGRLVSLLGSGIQSLALSLYILDITGSGAAMGTFLLINMLPRIVFAPLAGVFGDRLNRKWLMVYLDLF RGIIIFLMAFLAFKESMGIILIYGFQLIISTMDIFFDPVTRAILPDIVPENNLTSANSIVNATDSFSYIVGPILGGILYP LGIWLVFVLNATTFVISGISEIFISYEQTTVKKKITVRQIWEDLKDGVNAFKKLAGVLRIMIFIMLTNFLMGPVIMLVIP YFAREIVGFNSYQYGILNASWLIGITAGNILLVIIAKNKSIKRLFLTGLFFQLVLFYTFDTLTFPRMISFFGGPSWIYLI FIAGFFVAMGFFNAFINTPVGVYFQLATPTELRTRVLSAISLIAQISMPIGMAVYGLIVDKYPVHLVIFGSLILTTLITL VYLFTKTFDFLESKPKTENSIVESSETV
Sequences:
>Translated_428_residues MSSLQTNFRLYYFGRLVSLLGSGIQSLALSLYILDITGSGAAMGTFLLINMLPRIVFAPLAGVFGDRLNRKWLMVYLDLF RGIIIFLMAFLAFKESMGIILIYGFQLIISTMDIFFDPVTRAILPDIVPENNLTSANSIVNATDSFSYIVGPILGGILYP LGIWLVFVLNATTFVISGISEIFISYEQTTVKKKITVRQIWEDLKDGVNAFKKLAGVLRIMIFIMLTNFLMGPVIMLVIP YFAREIVGFNSYQYGILNASWLIGITAGNILLVIIAKNKSIKRLFLTGLFFQLVLFYTFDTLTFPRMISFFGGPSWIYLI FIAGFFVAMGFFNAFINTPVGVYFQLATPTELRTRVLSAISLIAQISMPIGMAVYGLIVDKYPVHLVIFGSLILTTLITL VYLFTKTFDFLESKPKTENSIVESSETV >Mature_427_residues SSLQTNFRLYYFGRLVSLLGSGIQSLALSLYILDITGSGAAMGTFLLINMLPRIVFAPLAGVFGDRLNRKWLMVYLDLFR GIIIFLMAFLAFKESMGIILIYGFQLIISTMDIFFDPVTRAILPDIVPENNLTSANSIVNATDSFSYIVGPILGGILYPL GIWLVFVLNATTFVISGISEIFISYEQTTVKKKITVRQIWEDLKDGVNAFKKLAGVLRIMIFIMLTNFLMGPVIMLVIPY FAREIVGFNSYQYGILNASWLIGITAGNILLVIIAKNKSIKRLFLTGLFFQLVLFYTFDTLTFPRMISFFGGPSWIYLIF IAGFFVAMGFFNAFINTPVGVYFQLATPTELRTRVLSAISLIAQISMPIGMAVYGLIVDKYPVHLVIFGSLILTTLITLV YLFTKTFDFLESKPKTENSIVESSETV
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47896; Mature: 47765
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLQTNFRLYYFGRLVSLLGSGIQSLALSLYILDITGSGAAMGTFLLINMLPRIVFAPL CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHH AGVFGDRLNRKWLMVYLDLFRGIIIFLMAFLAFKESMGIILIYGFQLIISTMDIFFDPVT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH RAILPDIVPENNLTSANSIVNATDSFSYIVGPILGGILYPLGIWLVFVLNATTFVISGIS HHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIFISYEQTTVKKKITVRQIWEDLKDGVNAFKKLAGVLRIMIFIMLTNFLMGPVIMLVIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFAREIVGFNSYQYGILNASWLIGITAGNILLVIIAKNKSIKRLFLTGLFFQLVLFYTFD HHHHHHHCCCCCEEEEECCCEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH TLTFPRMISFFGGPSWIYLIFIAGFFVAMGFFNAFINTPVGVYFQLATPTELRTRVLSAI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH SLIAQISMPIGMAVYGLIVDKYPVHLVIFGSLILTTLITLVYLFTKTFDFLESKPKTENS HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH IVESSETV HHCCCCCC >Mature Secondary Structure SSLQTNFRLYYFGRLVSLLGSGIQSLALSLYILDITGSGAAMGTFLLINMLPRIVFAPL CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHH AGVFGDRLNRKWLMVYLDLFRGIIIFLMAFLAFKESMGIILIYGFQLIISTMDIFFDPVT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH RAILPDIVPENNLTSANSIVNATDSFSYIVGPILGGILYPLGIWLVFVLNATTFVISGIS HHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIFISYEQTTVKKKITVRQIWEDLKDGVNAFKKLAGVLRIMIFIMLTNFLMGPVIMLVIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFAREIVGFNSYQYGILNASWLIGITAGNILLVIIAKNKSIKRLFLTGLFFQLVLFYTFD HHHHHHHCCCCCEEEEECCCEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH TLTFPRMISFFGGPSWIYLIFIAGFFVAMGFFNAFINTPVGVYFQLATPTELRTRVLSAI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH SLIAQISMPIGMAVYGLIVDKYPVHLVIFGSLILTTLITLVYLFTKTFDFLESKPKTENS HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH IVESSETV HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]