| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239617123
Identifier: 239617123
GI number: 239617123
Start: 777348
End: 778973
Strand: Reverse
Name: 239617123
Synonym: Kole_0726
Alternate gene names: NA
Gene position: 778973-777348 (Counterclockwise)
Preceding gene: 239617124
Following gene: 239617121
Centisome position: 33.84
GC content: 40.1
Gene sequence:
>1626_bases ATGTTGTCAGATACTCGTTGTCAAAATAAAAATGGCTTCATTCTTCCGATGATACTCATTGTATTAGTATTTTGCTCTGT TATGATTTATACAGTTAGTCTGCAGGTAAGCAGGTCGATAGACAAAATAAGAACTTTCAAGACCATGTCTATGGCTCAGA ATGTAGCCGCCAATGTTACTGAACTTGCTCTGGGCTACCTTGTAGCAAACTACGTGGATTCAAATTTCGAAGACGATTGG CAAGATCTCGCCAACTTTAAGGAATTTGTGACCTCTCGAAGTGGCCTTGAAGGTACTTATTGGGGAAACGCCCTGGAAAA AATAGCGGCGAGAAATTGCTGGAATCTTTCTGAGGAAAGAGATTTTATTAGTCTCCTGGAAAACTTACCATGGGTGAGTG ATTACGATTTTGGTGCAGTGATCTACAAATATGAAACAGGTGATAATATTAGCGATTATATTATTATAGGTTGGGCTAAA AAGCCTAATGTTAGAGGATATGCTTTAGGAGTTGCAACGGAAGAAAGAGAAAAAATATTTCCCGTACTTTCTTTTGGGAC CATCGAAAGGGAATTTTCTGAGTTGAAATCAGCCAAAAAAGGCCGTGGATTTGGTAGTCAAGTATTTACTGGTGATCTTT TATATGGTCCTGTAACCGTGTTGGGTAAAATCGAAGTGGCTGAAGAAAATGATCCAGCGAATATATTTTTACAGGGAGTA GCAGCTCATCAAGTTGAATTTAGCGAAGGTTACGATTTTAACTATACCCAGATATCCACACCTGCTGAAACCTATCTTTC AGACCTTAGGGAGGAATATCTGGAGGAGTTCAGCAGCTATGAGAGTACGGTGCTAAATCTTGACAACCCAGTTGTACCAG AACTGGCTGACACATTAGTTCTTGAAGTGTATCCACCGTCACCGGAAGATCAAGTACTGGTTGAGTTCGACGGTGGAAAG GTAATATTAGGAGCAAACGGAATCCCTCTGGTGACCATTCCAGAACAGGACTTTTTGCTCAGAATCTTGATACACGGAGA CGCAGTTTTTGACTATAACATAAATACACCAAGCACTGATGCTCAGAAGGCACAAAGAATAGACGGAAATTTTGAAATAT TAGTTGAGGGTGACGTCACATTGCATTCTAATTTAATCTACGACTCACTTTACACTGATTTCAACAACGGCAATGGCGGG AGTCCTGTAGTAAACCACGCGATTAATTCAGTAAAGGACTTTGTGGTAGAAGTTTCAAGCAAAGAAAATGATGAATCCCT CACTGTAATTTCAATTGGAGGAGATATAATCATAACTTATGGTCAGGGGGTTAGTGGCGTTGGAAATGCATCTCATGGCG TCAGGGTATTGAACGGTCGTTTCTTTGCTTTGCCAGATGAAGATGGTAAAGGTGGTACGTTTAGATTTCCAGATGTTGGG ACCGTACTTTCTGGTAACAAAGCATCCCAGCTTTTCATAGTAGGTTCTTTTGTTGGTGAAAGATTTGGTGCTCCTGAAGA TAATATTGACGAATATCTCAATATGCTTGTTGCCGTTTCCGATAGAACAGATAGCGATACATTATCTGAGAAAAAACTGA GATTGATCGGAATGAGAGTTTGGTAA
Upstream 100 bases:
>100_bases AGAGATTTAACTGTTAGAAATATTGAAGGACTCGAAGAAAATATTGTGGATTTTACGGTCACGCTTGAGGATATAAGCAC GGGAAGGGAGGAGTCCTTCC
Downstream 100 bases:
>100_bases TAATTAAAATAAGTCCTTAAAGTTTCTGGCGTTCTCTTTCAGCTGACACCATATTGGGTCTATAAACGCATACGTTAACC ATTCTTCAAATTGATGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MLSDTRCQNKNGFILPMILIVLVFCSVMIYTVSLQVSRSIDKIRTFKTMSMAQNVAANVTELALGYLVANYVDSNFEDDW QDLANFKEFVTSRSGLEGTYWGNALEKIAARNCWNLSEERDFISLLENLPWVSDYDFGAVIYKYETGDNISDYIIIGWAK KPNVRGYALGVATEEREKIFPVLSFGTIEREFSELKSAKKGRGFGSQVFTGDLLYGPVTVLGKIEVAEENDPANIFLQGV AAHQVEFSEGYDFNYTQISTPAETYLSDLREEYLEEFSSYESTVLNLDNPVVPELADTLVLEVYPPSPEDQVLVEFDGGK VILGANGIPLVTIPEQDFLLRILIHGDAVFDYNINTPSTDAQKAQRIDGNFEILVEGDVTLHSNLIYDSLYTDFNNGNGG SPVVNHAINSVKDFVVEVSSKENDESLTVISIGGDIIITYGQGVSGVGNASHGVRVLNGRFFALPDEDGKGGTFRFPDVG TVLSGNKASQLFIVGSFVGERFGAPEDNIDEYLNMLVAVSDRTDSDTLSEKKLRLIGMRVW
Sequences:
>Translated_541_residues MLSDTRCQNKNGFILPMILIVLVFCSVMIYTVSLQVSRSIDKIRTFKTMSMAQNVAANVTELALGYLVANYVDSNFEDDW QDLANFKEFVTSRSGLEGTYWGNALEKIAARNCWNLSEERDFISLLENLPWVSDYDFGAVIYKYETGDNISDYIIIGWAK KPNVRGYALGVATEEREKIFPVLSFGTIEREFSELKSAKKGRGFGSQVFTGDLLYGPVTVLGKIEVAEENDPANIFLQGV AAHQVEFSEGYDFNYTQISTPAETYLSDLREEYLEEFSSYESTVLNLDNPVVPELADTLVLEVYPPSPEDQVLVEFDGGK VILGANGIPLVTIPEQDFLLRILIHGDAVFDYNINTPSTDAQKAQRIDGNFEILVEGDVTLHSNLIYDSLYTDFNNGNGG SPVVNHAINSVKDFVVEVSSKENDESLTVISIGGDIIITYGQGVSGVGNASHGVRVLNGRFFALPDEDGKGGTFRFPDVG TVLSGNKASQLFIVGSFVGERFGAPEDNIDEYLNMLVAVSDRTDSDTLSEKKLRLIGMRVW >Mature_541_residues MLSDTRCQNKNGFILPMILIVLVFCSVMIYTVSLQVSRSIDKIRTFKTMSMAQNVAANVTELALGYLVANYVDSNFEDDW QDLANFKEFVTSRSGLEGTYWGNALEKIAARNCWNLSEERDFISLLENLPWVSDYDFGAVIYKYETGDNISDYIIIGWAK KPNVRGYALGVATEEREKIFPVLSFGTIEREFSELKSAKKGRGFGSQVFTGDLLYGPVTVLGKIEVAEENDPANIFLQGV AAHQVEFSEGYDFNYTQISTPAETYLSDLREEYLEEFSSYESTVLNLDNPVVPELADTLVLEVYPPSPEDQVLVEFDGGK VILGANGIPLVTIPEQDFLLRILIHGDAVFDYNINTPSTDAQKAQRIDGNFEILVEGDVTLHSNLIYDSLYTDFNNGNGG SPVVNHAINSVKDFVVEVSSKENDESLTVISIGGDIIITYGQGVSGVGNASHGVRVLNGRFFALPDEDGKGGTFRFPDVG TVLSGNKASQLFIVGSFVGERFGAPEDNIDEYLNMLVAVSDRTDSDTLSEKKLRLIGMRVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59838; Mature: 59838
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDTRCQNKNGFILPMILIVLVFCSVMIYTVSLQVSRSIDKIRTFKTMSMAQNVAANVT CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELALGYLVANYVDSNFEDDWQDLANFKEFVTSRSGLEGTYWGNALEKIAARNCWNLSEER HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHH DFISLLENLPWVSDYDFGAVIYKYETGDNISDYIIIGWAKKPNVRGYALGVATEEREKIF HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHCC PVLSFGTIEREFSELKSAKKGRGFGSQVFTGDLLYGPVTVLGKIEVAEENDPANIFLQGV EEEECCHHHHHHHHHHHHHCCCCCCCCEEECCEEECCEEEEEEEEEECCCCCCEEEEEEE AAHQVEFSEGYDFNYTQISTPAETYLSDLREEYLEEFSSYESTVLNLDNPVVPELADTLV EHEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHCCEEE LEVYPPSPEDQVLVEFDGGKVILGANGIPLVTIPEQDFLLRILIHGDAVFDYNINTPSTD EEEECCCCCCCEEEEECCCEEEECCCCCEEEEECCCCEEEEEEEECCEEEEEECCCCCCH AQKAQRIDGNFEILVEGDVTLHSNLIYDSLYTDFNNGNGGSPVVNHAINSVKDFVVEVSS HHHHHHCCCCEEEEEECCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECC KENDESLTVISIGGDIIITYGQGVSGVGNASHGVRVLNGRFFALPDEDGKGGTFRFPDVG CCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCCCEEECCCCC TVLSGNKASQLFIVGSFVGERFGAPEDNIDEYLNMLVAVSDRTDSDTLSEKKLRLIGMRV CEECCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHEEEEEEEC W C >Mature Secondary Structure MLSDTRCQNKNGFILPMILIVLVFCSVMIYTVSLQVSRSIDKIRTFKTMSMAQNVAANVT CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELALGYLVANYVDSNFEDDWQDLANFKEFVTSRSGLEGTYWGNALEKIAARNCWNLSEER HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHH DFISLLENLPWVSDYDFGAVIYKYETGDNISDYIIIGWAKKPNVRGYALGVATEEREKIF HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHCC PVLSFGTIEREFSELKSAKKGRGFGSQVFTGDLLYGPVTVLGKIEVAEENDPANIFLQGV EEEECCHHHHHHHHHHHHHCCCCCCCCEEECCEEECCEEEEEEEEEECCCCCCEEEEEEE AAHQVEFSEGYDFNYTQISTPAETYLSDLREEYLEEFSSYESTVLNLDNPVVPELADTLV EHEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHCCEEE LEVYPPSPEDQVLVEFDGGKVILGANGIPLVTIPEQDFLLRILIHGDAVFDYNINTPSTD EEEECCCCCCCEEEEECCCEEEECCCCCEEEEECCCCEEEEEEEECCEEEEEECCCCCCH AQKAQRIDGNFEILVEGDVTLHSNLIYDSLYTDFNNGNGGSPVVNHAINSVKDFVVEVSS HHHHHHCCCCEEEEEECCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECC KENDESLTVISIGGDIIITYGQGVSGVGNASHGVRVLNGRFFALPDEDGKGGTFRFPDVG CCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCCCEEECCCCC TVLSGNKASQLFIVGSFVGERFGAPEDNIDEYLNMLVAVSDRTDSDTLSEKKLRLIGMRV CEECCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHEEEEEEEC W C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA