Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
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Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is yesP [H]
Identifier: 239617090
GI number: 239617090
Start: 745867
End: 746736
Strand: Reverse
Name: yesP [H]
Synonym: Kole_0692
Alternate gene names: 239617090
Gene position: 746736-745867 (Counterclockwise)
Preceding gene: 239617091
Following gene: 239617089
Centisome position: 32.44
GC content: 42.3
Gene sequence:
>870_bases ATGAAGTTGAGAGGTTGGAGAAAAGCGATTTGGTTTTTGTTGCCTTACTTGTTGGGGTTAGCGATTTTTACTGTAGGACC GTTACTAGCCTCTTTCATAATCAGTTTTCATAGCTGGGACCTGTTTACAGAACCCAAAAGCGTTGGGTTAGCAAATTATG TGAAACTTTTGCACGATCCTTTATTCTGGAAATCGTTGTGGAACACGTTCTACTTTGCGGGGTTGGCAGTACCTGGCGGA ATTTTCCTTGGACTGTTGATGGCCGTTTTATTGAACAGAGAACAACCCGGTATGAAATTTTTCCGCTCCTTGTATTTTAT GCCGGTATTTACTCCCATGATAGCTGTAGCGATGGTGTGGATATGGCTTTATGAGCCGCAATATGGACTATTCAATTCTT TTTTGGATTTTCTGGGTATTCAAGGTCCTGATTGGCTTGGGGATGAAAAATGGGCCATGATCTCTATCGTTATCATGAGT GTCTGGAAAGGATTTGGTTATAGCATGATAATCTTCCTTGCCGCGTTAAAGGATATTCCGAGATCTTATTATGAGTCAGC AGAGATAGATGGGGCCACCTCGTGGCAGAAATTCTGGAGAATAACGTTTCCGTTGGTGAGTCCGATCACTTTCTTCCTGG TGGTAATGAACTTAATCACTTCTATGCAGGTGTTTGACCAGATGTACGCGATGACCAAAGGTGGGCCAAATGATGCCACG TTGAGCATTGTTTACTATCTCTACAAAAATGGGTTTGAATTCTTCAGAATGGGCTATGCCTCAGCTATTGCCTGGGGCTT GTTTATAGTGATACTTGTTCTTACGCTCATACAACTAAAAGTCCAAAAGAAGTGGGTGTTTTACGCATGA
Upstream 100 bases:
>100_bases GATCTTGAACTCCAAATAATCATCGTTCAACTAGAATAAGAATATGCGGGGGAAGGGCCGAAACTCTTCCCCCATTATTA AGCACTTGAGATCGAAGGTG
Downstream 100 bases:
>100_bases GCAAAAAGCATAAGAGAATTATTCAAGCTTTCATTATATATGTGGTGTTGTCTATCGGCACCATCGCTATGGTTCTACCG TTTTTATGGATGTTCTTTTC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKLRGWRKAIWFLLPYLLGLAIFTVGPLLASFIISFHSWDLFTEPKSVGLANYVKLLHDPLFWKSLWNTFYFAGLAVPGG IFLGLLMAVLLNREQPGMKFFRSLYFMPVFTPMIAVAMVWIWLYEPQYGLFNSFLDFLGIQGPDWLGDEKWAMISIVIMS VWKGFGYSMIIFLAALKDIPRSYYESAEIDGATSWQKFWRITFPLVSPITFFLVVMNLITSMQVFDQMYAMTKGGPNDAT LSIVYYLYKNGFEFFRMGYASAIAWGLFIVILVLTLIQLKVQKKWVFYA
Sequences:
>Translated_289_residues MKLRGWRKAIWFLLPYLLGLAIFTVGPLLASFIISFHSWDLFTEPKSVGLANYVKLLHDPLFWKSLWNTFYFAGLAVPGG IFLGLLMAVLLNREQPGMKFFRSLYFMPVFTPMIAVAMVWIWLYEPQYGLFNSFLDFLGIQGPDWLGDEKWAMISIVIMS VWKGFGYSMIIFLAALKDIPRSYYESAEIDGATSWQKFWRITFPLVSPITFFLVVMNLITSMQVFDQMYAMTKGGPNDAT LSIVYYLYKNGFEFFRMGYASAIAWGLFIVILVLTLIQLKVQKKWVFYA >Mature_289_residues MKLRGWRKAIWFLLPYLLGLAIFTVGPLLASFIISFHSWDLFTEPKSVGLANYVKLLHDPLFWKSLWNTFYFAGLAVPGG IFLGLLMAVLLNREQPGMKFFRSLYFMPVFTPMIAVAMVWIWLYEPQYGLFNSFLDFLGIQGPDWLGDEKWAMISIVIMS VWKGFGYSMIIFLAALKDIPRSYYESAEIDGATSWQKFWRITFPLVSPITFFLVVMNLITSMQVFDQMYAMTKGGPNDAT LSIVYYLYKNGFEFFRMGYASAIAWGLFIVILVLTLIQLKVQKKWVFYA
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789861, Length=278, Percent_Identity=33.8129496402878, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=35.3846153846154, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1790465, Length=216, Percent_Identity=28.2407407407407, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33442; Mature: 33442
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRGWRKAIWFLLPYLLGLAIFTVGPLLASFIISFHSWDLFTEPKSVGLANYVKLLHDP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHH LFWKSLWNTFYFAGLAVPGGIFLGLLMAVLLNREQPGMKFFRSLYFMPVFTPMIAVAMVW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IWLYEPQYGLFNSFLDFLGIQGPDWLGDEKWAMISIVIMSVWKGFGYSMIIFLAALKDIP HHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RSYYESAEIDGATSWQKFWRITFPLVSPITFFLVVMNLITSMQVFDQMYAMTKGGPNDAT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LSIVYYLYKNGFEFFRMGYASAIAWGLFIVILVLTLIQLKVQKKWVFYA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLRGWRKAIWFLLPYLLGLAIFTVGPLLASFIISFHSWDLFTEPKSVGLANYVKLLHDP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHH LFWKSLWNTFYFAGLAVPGGIFLGLLMAVLLNREQPGMKFFRSLYFMPVFTPMIAVAMVW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IWLYEPQYGLFNSFLDFLGIQGPDWLGDEKWAMISIVIMSVWKGFGYSMIIFLAALKDIP HHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RSYYESAEIDGATSWQKFWRITFPLVSPITFFLVVMNLITSMQVFDQMYAMTKGGPNDAT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LSIVYYLYKNGFEFFRMGYASAIAWGLFIVILVLTLIQLKVQKKWVFYA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]