Click here to switch to the map view.

The map label for this gene is yteT [H]

Identifier: 239617087

GI number: 239617087

Start: 741737

End: 743008

Strand: Reverse

Name: yteT [H]

Synonym: Kole_0689

Alternate gene names: 239617087

Gene position: 743008-741737 (Counterclockwise)

Preceding gene: 239617088

Following gene: 239617086

Centisome position: 32.27

GC content: 42.85

Gene sequence:

>1272_bases
TTGAGTAAAGTTACGGCAGTACTGATGGGCGCTGGAAGCAGAGGAAGAGATGCCTTTGGCGCATATGCGAAGAATAATCC
ACACAAACTGGAGATAGTAGCGGTAGCTGAACCGGATCCGATAAAGAGAAACCGTCTGGCTGACGAACTGGAAATACCTG
AAGCCAGACGCTTTGAAGACTGGAAAGATCTCCTTTCCGTAGGGAAAATAGCAGATGGTGCGATAATAGCAACGATGGAC
GACCTTCATGTAGAACCTTCCATAGAAGCTATGAAACTTGGATACGATATACTTCTTGAAAAACCTATGGATAGAACCCT
TGAAGGTTCCATAAAAATAGCCCTCGCATCTCAAAAGTACGGAAAAAGAGTTATGGTTTGCCATGTGCTCCGTTATTCAC
TGTTTTTTTCGAAACTCAGAGAACTGATGCACTCCGGCATCATAGGCAGGATTATGGGTATAGAGCATAAAGAGAACATC
GGATATTTTCATATGGCACACAGTTTTGTTCGTGGTAATTGGAGAAATTCTAAGGAAACAGCACCGATAATTCTGACGAA
ATCGTGTCACGATATGGATCTCCTTTATTGGCTGGTGGGCGAAAAATGCACCTACATTTCCTCATTTGGCGAGTTGTCCC
ACTTCAGGAGAGAAAACATGCCTGAAGGGGCTGCAGAAAGATGTACGCAGGGTTGTCTGGTGGAGAAAGAGTGTCCTTAT
TCTGCCATTAAGATATACCTTGGCGATAATGTAGATTGGCCTGTCAATGTGATTTCAACGGATTTATCGTATGAAGGTAG
ATTGAAGGCATTGAACGAAGGACCTTACGGTAGATGTGTATATGCGTGTGATAACGATGTCGTCGACCATCAGGTGGTTT
CAATGACTTTTGGCAAAGATGTGATGGTTAATTTCACATTATCCGCGTTTACTAGAGAGATTTCGCGAACAATACGTGTT
TTCGGAACCATGGGAGAAATTCGTGGACACTTTGAAAAGAATGAACTGGAAGTAACCCGTTTTGGTAAAGAGCCAGAAGT
AATAAAGATAGAAGATCCAGGCATAGGTGGGCACAACGGGGCAGACTACCATATGATGAATGCTTTCGTTGAGATGCTTT
CGAACGAAGAATATGAAGGTACACTTACCTCAGCAATGGATTCCCTGGAAAGTCATCTAATGGCATTTGCGGCTGAAGAA
TCGAGACTGAATAATAAGGTTATAAACATGGAAGAATATCGAAAAGAAAAGCTCTATGGATCGGGGAGGTAA

Upstream 100 bases:

>100_bases
CGCAGAAACTTCCAGCTAACTGGGGTATGACAAATCTATTCAATAACATTGTATTGGGCAATCGTTAAGCAATTCTACTC
TCTTTGAGGAGGTGCTCTTT

Downstream 100 bases:

>100_bases
TAGACATGCAAACACTCGATGAAATAAGACAGCAGCCAGAGAAGCATCGATTACTCAGTGAAAAGTATCCAGAAGTAATT
CAGAAACTAAAAGATTTAAT

Product: oxidoreductase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSKVTAVLMGAGSRGRDAFGAYAKNNPHKLEIVAVAEPDPIKRNRLADELEIPEARRFEDWKDLLSVGKIADGAIIATMD
DLHVEPSIEAMKLGYDILLEKPMDRTLEGSIKIALASQKYGKRVMVCHVLRYSLFFSKLRELMHSGIIGRIMGIEHKENI
GYFHMAHSFVRGNWRNSKETAPIILTKSCHDMDLLYWLVGEKCTYISSFGELSHFRRENMPEGAAERCTQGCLVEKECPY
SAIKIYLGDNVDWPVNVISTDLSYEGRLKALNEGPYGRCVYACDNDVVDHQVVSMTFGKDVMVNFTLSAFTREISRTIRV
FGTMGEIRGHFEKNELEVTRFGKEPEVIKIEDPGIGGHNGADYHMMNAFVEMLSNEEYEGTLTSAMDSLESHLMAFAAEE
SRLNNKVINMEEYRKEKLYGSGR

Sequences:

>Translated_423_residues
MSKVTAVLMGAGSRGRDAFGAYAKNNPHKLEIVAVAEPDPIKRNRLADELEIPEARRFEDWKDLLSVGKIADGAIIATMD
DLHVEPSIEAMKLGYDILLEKPMDRTLEGSIKIALASQKYGKRVMVCHVLRYSLFFSKLRELMHSGIIGRIMGIEHKENI
GYFHMAHSFVRGNWRNSKETAPIILTKSCHDMDLLYWLVGEKCTYISSFGELSHFRRENMPEGAAERCTQGCLVEKECPY
SAIKIYLGDNVDWPVNVISTDLSYEGRLKALNEGPYGRCVYACDNDVVDHQVVSMTFGKDVMVNFTLSAFTREISRTIRV
FGTMGEIRGHFEKNELEVTRFGKEPEVIKIEDPGIGGHNGADYHMMNAFVEMLSNEEYEGTLTSAMDSLESHLMAFAAEE
SRLNNKVINMEEYRKEKLYGSGR
>Mature_422_residues
SKVTAVLMGAGSRGRDAFGAYAKNNPHKLEIVAVAEPDPIKRNRLADELEIPEARRFEDWKDLLSVGKIADGAIIATMDD
LHVEPSIEAMKLGYDILLEKPMDRTLEGSIKIALASQKYGKRVMVCHVLRYSLFFSKLRELMHSGIIGRIMGIEHKENIG
YFHMAHSFVRGNWRNSKETAPIILTKSCHDMDLLYWLVGEKCTYISSFGELSHFRRENMPEGAAERCTQGCLVEKECPYS
AIKIYLGDNVDWPVNVISTDLSYEGRLKALNEGPYGRCVYACDNDVVDHQVVSMTFGKDVMVNFTLSAFTREISRTIRVF
GTMGEIRGHFEKNELEVTRFGKEPEVIKIEDPGIGGHNGADYHMMNAFVEMLSNEEYEGTLTSAMDSLESHLMAFAAEES
RLNNKVINMEEYRKEKLYGSGR

Specific function: May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=177, Percent_Identity=27.683615819209, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 47794; Mature: 47663

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVTAVLMGAGSRGRDAFGAYAKNNPHKLEIVAVAEPDPIKRNRLADELEIPEARRFED
CCCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCHHHCHHHCCCCCCCCHHH
WKDLLSVGKIADGAIIATMDDLHVEPSIEAMKLGYDILLEKPMDRTLEGSIKIALASQKY
HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHCCHHHEECCCCCCCCCCCEEEEEECCCC
GKRVMVCHVLRYSLFFSKLRELMHSGIIGRIMGIEHKENIGYFHMAHSFVRGNWRNSKET
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
APIILTKSCHDMDLLYWLVGEKCTYISSFGELSHFRRENMPEGAAERCTQGCLVEKECPY
CCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
SAIKIYLGDNVDWPVNVISTDLSYEGRLKALNEGPYGRCVYACDNDVVDHQVVSMTFGKD
EEEEEEECCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCC
VMVNFTLSAFTREISRTIRVFGTMGEIRGHFEKNELEVTRFGKEPEVIKIEDPGIGGHNG
EEEEEEHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCC
ADYHMMNAFVEMLSNEEYEGTLTSAMDSLESHLMAFAAEESRLNNKVINMEEYRKEKLYG
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCC
SGR
CCC
>Mature Secondary Structure 
SKVTAVLMGAGSRGRDAFGAYAKNNPHKLEIVAVAEPDPIKRNRLADELEIPEARRFED
CCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCHHHCHHHCCCCCCCCHHH
WKDLLSVGKIADGAIIATMDDLHVEPSIEAMKLGYDILLEKPMDRTLEGSIKIALASQKY
HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHCCHHHEECCCCCCCCCCCEEEEEECCCC
GKRVMVCHVLRYSLFFSKLRELMHSGIIGRIMGIEHKENIGYFHMAHSFVRGNWRNSKET
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
APIILTKSCHDMDLLYWLVGEKCTYISSFGELSHFRRENMPEGAAERCTQGCLVEKECPY
CCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
SAIKIYLGDNVDWPVNVISTDLSYEGRLKALNEGPYGRCVYACDNDVVDHQVVSMTFGKD
EEEEEEECCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCC
VMVNFTLSAFTREISRTIRVFGTMGEIRGHFEKNELEVTRFGKEPEVIKIEDPGIGGHNG
EEEEEEHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCC
ADYHMMNAFVEMLSNEEYEGTLTSAMDSLESHLMAFAAEESRLNNKVINMEEYRKEKLYG
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCC
SGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]