Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
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Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is menC [H]
Identifier: 239617080
GI number: 239617080
Start: 733555
End: 734730
Strand: Reverse
Name: menC [H]
Synonym: Kole_0682
Alternate gene names: 239617080
Gene position: 734730-733555 (Counterclockwise)
Preceding gene: 239617081
Following gene: 239617079
Centisome position: 31.92
GC content: 44.3
Gene sequence:
>1176_bases ATGATAACTGAATCAGCAAGAATAGATGGCGTTAGTTTGTATGAGATAGTAATCCCAATGAAGATACCCTTCCAGATAAG CTCGGGTACCTGCTATACGAGAAGATCCCTTGTTGTGGAGATTCGTGAGGGTGACCTTTTTGGTTATGGAGAATCAGCTC CTTTTGAAGAACCCTTCTATCTGGGAGAAACTCTGGAAACAACCAAAGTTATCCTGAAGAATCATCTTCTTCCGATGATT CTTGGAAAAGAACCTTTGTCGATTGAAGAGTTCAATCACCTCATCAAAAACGGGATTCGTGGTAACCACTTCGCGAGATG TGGAGTGGAGAACGCTTACTGGGATCTCATCGCAAAGAAAAACAAGATATCTTTGAAAGCAATGATAGAGAAGAAAATGA AAAATTTAGGAGTAAAACAAGAATATCTTGCTTCCAATAATTACATAGAATCGGGTGCCGCTCTTGGAATACCGGAAGAT GGCAGGATCGAAACCCTGATACACCAGGTGGAGGAATCTCTTCAGGAAGGCTACAGGAGGATAAAGATAAAGATAAAACC CGGATGGGACGTGGAGCCTCTTCAAGAAACCAGAAGGGCAGTTGGAGATCATTTTCCTCTGTGGACTGACGCAAATTCTT CTTTTGAGCTCGATCAGTGGGAAACGTTTAAAGCTATGGATGCAGCCAAATGCCTTTTTCACGAGCAGCCGTTACATTAT GAGGCTCTGTTAGATCTGAAAGAGCTTGGTGAAAGGATAGAGACGCCGATCTGCCTTGACGAGTCTTTGATTTCCTCGCG AGTAGCCGAATTTGTGGCGAAATTGGGAATATCCAATATCTGGAACATAAAAATCCAGCGGGTTGGAGGGTTGCTGGAAG CCATTAAGATCTACAAGATTGCCACAGACAACGGAATAAAACTTTGGGGCGGTACTATGCCAGAAAGCGGGCTGGGTGCG AGGTTTTTGATTAGCCTGGCTTCTTTCAGAGGATTTGTTTTTCCTGCTGATGTAGCGGCCAGCGAGAAATGGTACGGCAA GGGAAATGATCTGGTTGAGAACACCATGACGGATGGGAAGATCTATGTACCGGATGAACCTGGAGCGAGTTTTGATATGA CCTTAAGTCATCTGGAAGCTCTGGGCAAAAAAATCTGGGAGAGTCAAAGGGGTTGA
Upstream 100 bases:
>100_bases GCAATGAAATGGCTTGAAGAAAAAGGTTATCTCTTTAGGGTAGATGATCTTTTAAGATTCCTGGACATATTTGATCACAG CATTGAAAGGAGCTGTAGTG
Downstream 100 bases:
>100_bases ATACAAATGACGAAGATAAGCTCAAAAAAATACATGGCAGCGTATTTGCTTCTCCTTCCAAATATCATTCTGTACATACT GGTAAGGCTTATTCCCCTGT
Product: Mandelate racemase/muconate lactonizing protein
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MITESARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIREGDLFGYGESAPFEEPFYLGETLETTKVILKNHLLPMI LGKEPLSIEEFNHLIKNGIRGNHFARCGVENAYWDLIAKKNKISLKAMIEKKMKNLGVKQEYLASNNYIESGAALGIPED GRIETLIHQVEESLQEGYRRIKIKIKPGWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQPLHY EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGTMPESGLGA RFLISLASFRGFVFPADVAASEKWYGKGNDLVENTMTDGKIYVPDEPGASFDMTLSHLEALGKKIWESQRG
Sequences:
>Translated_391_residues MITESARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIREGDLFGYGESAPFEEPFYLGETLETTKVILKNHLLPMI LGKEPLSIEEFNHLIKNGIRGNHFARCGVENAYWDLIAKKNKISLKAMIEKKMKNLGVKQEYLASNNYIESGAALGIPED GRIETLIHQVEESLQEGYRRIKIKIKPGWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQPLHY EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGTMPESGLGA RFLISLASFRGFVFPADVAASEKWYGKGNDLVENTMTDGKIYVPDEPGASFDMTLSHLEALGKKIWESQRG >Mature_391_residues MITESARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIREGDLFGYGESAPFEEPFYLGETLETTKVILKNHLLPMI LGKEPLSIEEFNHLIKNGIRGNHFARCGVENAYWDLIAKKNKISLKAMIEKKMKNLGVKQEYLASNNYIESGAALGIPED GRIETLIHQVEESLQEGYRRIKIKIKPGWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQPLHY EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGTMPESGLGA RFLISLASFRGFVFPADVAASEKWYGKGNDLVENTMTDGKIYVPDEPGASFDMTLSHLEALGKKIWESQRG
Specific function: Converts SHCHC to OSB [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 - InterPro: IPR010197 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 44018; Mature: 44018
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITESARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIREGDLFGYGESAPFEEPFY CCCCCCCCCCEEEEEEEEEEEECEEECCCCEEEECEEEEEEECCCEECCCCCCCCCCCCC LGETLETTKVILKNHLLPMILGKEPLSIEEFNHLIKNGIRGNHFARCGVENAYWDLIAKK CCCHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCC NKISLKAMIEKKMKNLGVKQEYLASNNYIESGAALGIPEDGRIETLIHQVEESLQEGYRR CCHHHHHHHHHHHHHCCCCHHHHHCCCEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHE IKIKIKPGWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQPLHY EEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKI HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHEEEE ATDNGIKLWGGTMPESGLGARFLISLASFRGFVFPADVAASEKWYGKGNDLVENTMTDGK ECCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHCCCCCE IYVPDEPGASFDMTLSHLEALGKKIWESQRG EECCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MITESARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIREGDLFGYGESAPFEEPFY CCCCCCCCCCEEEEEEEEEEEECEEECCCCEEEECEEEEEEECCCEECCCCCCCCCCCCC LGETLETTKVILKNHLLPMILGKEPLSIEEFNHLIKNGIRGNHFARCGVENAYWDLIAKK CCCHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCC NKISLKAMIEKKMKNLGVKQEYLASNNYIESGAALGIPEDGRIETLIHQVEESLQEGYRR CCHHHHHHHHHHHHHCCCCHHHHHCCCEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHE IKIKIKPGWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQPLHY EEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKI HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHEEEE ATDNGIKLWGGTMPESGLGARFLISLASFRGFVFPADVAASEKWYGKGNDLVENTMTDGK ECCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHCCCCCE IYVPDEPGASFDMTLSHLEALGKKIWESQRG EECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 10194342 [H]