Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
---|---|
Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is 239617063
Identifier: 239617063
GI number: 239617063
Start: 705790
End: 708771
Strand: Reverse
Name: 239617063
Synonym: Kole_0665
Alternate gene names: NA
Gene position: 708771-705790 (Counterclockwise)
Preceding gene: 239617064
Following gene: 239617062
Centisome position: 30.79
GC content: 35.92
Gene sequence:
>2982_bases ATGAGTAAAGACTTGACAGTTCTTGCGGAAAACAGAGATGTTTTGCTTACTGCCGAAATAGCGGCTTGGTTGCATATGTT AGGAAAATATACTAAAGAATTTATAGATAGTGATCTTTCAATGTCTTCAAAATTGCCAAACAGTATATCCAAAAATCTTA GGAGACTCTTTAAAGAAGATTTGCTCAAAAATTCCCAAAAAAAGCTACCAGTACAAGAGTTGCAGACTCCCCTTATAATA GAAGAATTTATCTCAAAACATGAACTAGGGAACAATAAAATAAAAAATGACCCAAATGCATTCAATAAACTGATGAATGA TGCTCATGGTCGTGGTTCTGGTACAGAAAAAGGAGTTTTAAAAAGTGGTGCTTACTCGTCTCAACACAATTCAAGTATCC GCATATCAACTGCTTTTGGCTATGAAGAGGATCCCATAGATGTTAATGAAATTGATCTAAATTCCAAGGATCTTTATATT TTTATCGAAAGTGCCATTATAGAGGCACAGAAACTTTTACAAATTAACAAGACTGGTAATTTTGAAAAATGGAATGAACT TAGAATAGGAATAATAAATGCCGTGAATCAACACTTTACAAAGACAATAGGAGATACAAGAAGACCAATAAACGATGTTA CACTTTGGGATCAAACAGTTTCTTCGGTTGCTTTTTTCAAGGCAGAACTTGCAGAAGGACTTATAAATGGTTATAAGGAT CCTTTTGATGAGAACAGCAAATACACTTTCAGATATCTCCATATGACATTTAATGGTGAAGAATATTTGGCAAAAGGGAT TGGGATTGGCGATATTGCAAGTCGAAGAAAGCTGATTGATGAAGCATTTGACGGAGTTAAGTTGATTATTGAAGTTGAGT ATCCTTTGGGCTTAGAAATATATAGAGACATAAATGGGATAACCTTCCTAATTCCAAAACTAAGTGAAAAACTAGAAATT GATGATTTGATCATCAATGAAGGTGTTACTTTGAAACAGAGAATTTTGGATGAGGTTATTGCCATTACGAAGGGTGAAAT AACTCCATACTTTTATATCAGCGAAAAGTCTTCCAGAAATCTTTATAATTTGGGTTCCATGATATCAAAGAAAACTGATA CCAATATTCCTTCGCTAAGATTGCAAAATCTCTGGATTCAGAAAGCCGAACTATGCTCTTCTTGTTGCATAAAGCCTGTT GATAGTAATTCCATGAGAAATAAGCAAAAGAGATTGTGCCAAGAATGTTCAGAGAGAATTACGGGTAGAGCAAAACAGTG GTTAGATAGTAGGAAAGAACAAACTATATGGATCGATGAAATCGCAGATTCAAAGGGAAAAATAGCACTGCTTAGTTTTG GTTTCAACTTGAATAGTTGGATCGGTAATGCAGACAGTCTTTCAACATTCAGAAATCTCAAGAAGACCGTTGGTTTTTCA TTCGCAGAACTCATGAGAGAGCTAACGACACCGGTAAAATTGCTGGAAATGCAAAAACTCAAAAGTATTGGGAATAAATA TGTTTTAAGAGATCGTAAGACAGCTGATGGTCTTTATAACTTCATGGTCGGTTCTGAAGATCTCGAAGTTAACAAAGAGC TCACAAAATATGAGAAATTGGCCCTTTCAATTTGGCGGAAACCTCCTTCATTTGCAAGGGTTCGTAGAGTTTGGGAGACA ACAAGCAAGTTTTGGGGTGACGCACTTGCTGACATTAGAAAAACCGTGGGAATGCGAGATAAAAGGCTTATTCTTAAAAT CCAAGCAAATAATCTAAGAGATCTTAATGTTAATAATGCTTATGAAGTTAAAGTCAATGGCATCAGATTCACTGTATTCT ACGAAGCTAATAATCCAAAAGGCGCTAATGAATTCTCCAATTTTGTGATAATTGAGAACCTTGAACTATTAGCTAAGAAG TTAAATATTGATACTAAAAGCAATTGGAAAAATCTGGTTGATGGCATTAAAGAAATACTGAATGGTAAAAATATAGATTT CTACAACTCCAATAGCCCCACAAAAAAATTAGCCATTTCAAGGATCGGGGATATTGAAATTGAATCATGTAGTTACTCTC CAGTGATTGAAATAACAAAAGATCCGGAAAGATTCATGGTTCTTGTTCCAGCCAATAAAGCGCTTAAGGTTGCCAAAAAG ATAAAGAAAAAATACGAGAAAGAAATGGGCAAAGTCAGAAATCGGCTACCTATGAATCTTGGGATAGTGTATGCAAGATA TCATACAGCACTTCCAGCAATTATAGATGCCGGACGCCGATTTATGCGATTAAATAATAAACAGGAAACTTGGAGGTTAG CAAAGCAACCGGATGAATTTCCTGATCATTTCAAATTGTCATTTGAAAATGGGCAGATTTGGAAAATCCCTTCAAAGATG GGGGATGGTTCAAAAGATATATGGTATCCGTATTTTTATGTTGTAAATAATGACAAAGCTGAACTTGAAAATAGGTCTCT TTCTTTCAAAGGGCCATCTGGAGAGTGGTTGATTCATGTGTCAGAACTCAAGATAGGTGATGAAATTCTCGTCATACCAT CATATTTTGATTTTGAATACCTTTCTTCGGCTTCCCAGAGGTTTGAGATAAGCTATAACGATAAAAACAACAAAGTCCAA AGGCGTTCGGATAACAGAAAGCAGCGGCCATATTATCTCGACGATCTGGACGATATCGAAAGGGTATGGGCAACGCTCTC AACAAAACTCCCAAACAGCCAGATAAAGAAATTGAACAGCCTTGTAGAAAAAAAGCGAAGGGATTGGGCCAGTTCTTTGG AGGATAATGATGAAGTCTTCAAAGCTTATGTTGAGTATGTTGTTGGCAATCTTAAATGGAAACCATCGCTCAGCAACGAT GAAAGAAAGAAAATCATTGATTTCTGCGTGAATGGGAAACTCTCTGATGTGCTGGAAATTCACATGAGCATATTAAAGGA TAAAACGGGGGTGATAGAATGA
Upstream 100 bases:
>100_bases AAAAAATATGTGTGAGTTCAATAGCTTTGATGAACTGATTGATATGTTAAAAAAATATATGCTTTGAATTCCCATTCAGA AACAGTGGGAGGTATTTCAG
Downstream 100 bases:
>100_bases ACAATGAACTTTATAAAAAGAAGAAATTCATTTTCATGACACTTGACCCGATACATATAGGAACAGGTGGAGCAAATTTG GGGATAGTTGATAACACAAT
Product: CRISPR-associated protein, Csx11 family
Products: NA
Alternate protein names: Crispr-Associated Protein; Csx11 Family CRISPR-Associated Protein
Number of amino acids: Translated: 993; Mature: 992
Protein sequence:
>993_residues MSKDLTVLAENRDVLLTAEIAAWLHMLGKYTKEFIDSDLSMSSKLPNSISKNLRRLFKEDLLKNSQKKLPVQELQTPLII EEFISKHELGNNKIKNDPNAFNKLMNDAHGRGSGTEKGVLKSGAYSSQHNSSIRISTAFGYEEDPIDVNEIDLNSKDLYI FIESAIIEAQKLLQINKTGNFEKWNELRIGIINAVNQHFTKTIGDTRRPINDVTLWDQTVSSVAFFKAELAEGLINGYKD PFDENSKYTFRYLHMTFNGEEYLAKGIGIGDIASRRKLIDEAFDGVKLIIEVEYPLGLEIYRDINGITFLIPKLSEKLEI DDLIINEGVTLKQRILDEVIAITKGEITPYFYISEKSSRNLYNLGSMISKKTDTNIPSLRLQNLWIQKAELCSSCCIKPV DSNSMRNKQKRLCQECSERITGRAKQWLDSRKEQTIWIDEIADSKGKIALLSFGFNLNSWIGNADSLSTFRNLKKTVGFS FAELMRELTTPVKLLEMQKLKSIGNKYVLRDRKTADGLYNFMVGSEDLEVNKELTKYEKLALSIWRKPPSFARVRRVWET TSKFWGDALADIRKTVGMRDKRLILKIQANNLRDLNVNNAYEVKVNGIRFTVFYEANNPKGANEFSNFVIIENLELLAKK LNIDTKSNWKNLVDGIKEILNGKNIDFYNSNSPTKKLAISRIGDIEIESCSYSPVIEITKDPERFMVLVPANKALKVAKK IKKKYEKEMGKVRNRLPMNLGIVYARYHTALPAIIDAGRRFMRLNNKQETWRLAKQPDEFPDHFKLSFENGQIWKIPSKM GDGSKDIWYPYFYVVNNDKAELENRSLSFKGPSGEWLIHVSELKIGDEILVIPSYFDFEYLSSASQRFEISYNDKNNKVQ RRSDNRKQRPYYLDDLDDIERVWATLSTKLPNSQIKKLNSLVEKKRRDWASSLEDNDEVFKAYVEYVVGNLKWKPSLSND ERKKIIDFCVNGKLSDVLEIHMSILKDKTGVIE
Sequences:
>Translated_993_residues MSKDLTVLAENRDVLLTAEIAAWLHMLGKYTKEFIDSDLSMSSKLPNSISKNLRRLFKEDLLKNSQKKLPVQELQTPLII EEFISKHELGNNKIKNDPNAFNKLMNDAHGRGSGTEKGVLKSGAYSSQHNSSIRISTAFGYEEDPIDVNEIDLNSKDLYI FIESAIIEAQKLLQINKTGNFEKWNELRIGIINAVNQHFTKTIGDTRRPINDVTLWDQTVSSVAFFKAELAEGLINGYKD PFDENSKYTFRYLHMTFNGEEYLAKGIGIGDIASRRKLIDEAFDGVKLIIEVEYPLGLEIYRDINGITFLIPKLSEKLEI DDLIINEGVTLKQRILDEVIAITKGEITPYFYISEKSSRNLYNLGSMISKKTDTNIPSLRLQNLWIQKAELCSSCCIKPV DSNSMRNKQKRLCQECSERITGRAKQWLDSRKEQTIWIDEIADSKGKIALLSFGFNLNSWIGNADSLSTFRNLKKTVGFS FAELMRELTTPVKLLEMQKLKSIGNKYVLRDRKTADGLYNFMVGSEDLEVNKELTKYEKLALSIWRKPPSFARVRRVWET TSKFWGDALADIRKTVGMRDKRLILKIQANNLRDLNVNNAYEVKVNGIRFTVFYEANNPKGANEFSNFVIIENLELLAKK LNIDTKSNWKNLVDGIKEILNGKNIDFYNSNSPTKKLAISRIGDIEIESCSYSPVIEITKDPERFMVLVPANKALKVAKK IKKKYEKEMGKVRNRLPMNLGIVYARYHTALPAIIDAGRRFMRLNNKQETWRLAKQPDEFPDHFKLSFENGQIWKIPSKM GDGSKDIWYPYFYVVNNDKAELENRSLSFKGPSGEWLIHVSELKIGDEILVIPSYFDFEYLSSASQRFEISYNDKNNKVQ RRSDNRKQRPYYLDDLDDIERVWATLSTKLPNSQIKKLNSLVEKKRRDWASSLEDNDEVFKAYVEYVVGNLKWKPSLSND ERKKIIDFCVNGKLSDVLEIHMSILKDKTGVIE >Mature_992_residues SKDLTVLAENRDVLLTAEIAAWLHMLGKYTKEFIDSDLSMSSKLPNSISKNLRRLFKEDLLKNSQKKLPVQELQTPLIIE EFISKHELGNNKIKNDPNAFNKLMNDAHGRGSGTEKGVLKSGAYSSQHNSSIRISTAFGYEEDPIDVNEIDLNSKDLYIF IESAIIEAQKLLQINKTGNFEKWNELRIGIINAVNQHFTKTIGDTRRPINDVTLWDQTVSSVAFFKAELAEGLINGYKDP FDENSKYTFRYLHMTFNGEEYLAKGIGIGDIASRRKLIDEAFDGVKLIIEVEYPLGLEIYRDINGITFLIPKLSEKLEID DLIINEGVTLKQRILDEVIAITKGEITPYFYISEKSSRNLYNLGSMISKKTDTNIPSLRLQNLWIQKAELCSSCCIKPVD SNSMRNKQKRLCQECSERITGRAKQWLDSRKEQTIWIDEIADSKGKIALLSFGFNLNSWIGNADSLSTFRNLKKTVGFSF AELMRELTTPVKLLEMQKLKSIGNKYVLRDRKTADGLYNFMVGSEDLEVNKELTKYEKLALSIWRKPPSFARVRRVWETT SKFWGDALADIRKTVGMRDKRLILKIQANNLRDLNVNNAYEVKVNGIRFTVFYEANNPKGANEFSNFVIIENLELLAKKL NIDTKSNWKNLVDGIKEILNGKNIDFYNSNSPTKKLAISRIGDIEIESCSYSPVIEITKDPERFMVLVPANKALKVAKKI KKKYEKEMGKVRNRLPMNLGIVYARYHTALPAIIDAGRRFMRLNNKQETWRLAKQPDEFPDHFKLSFENGQIWKIPSKMG DGSKDIWYPYFYVVNNDKAELENRSLSFKGPSGEWLIHVSELKIGDEILVIPSYFDFEYLSSASQRFEISYNDKNNKVQR RSDNRKQRPYYLDDLDDIERVWATLSTKLPNSQIKKLNSLVEKKRRDWASSLEDNDEVFKAYVEYVVGNLKWKPSLSNDE RKKIIDFCVNGKLSDVLEIHMSILKDKTGVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 114246; Mature: 114115
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDLTVLAENRDVLLTAEIAAWLHMLGKYTKEFIDSDLSMSSKLPNSISKNLRRLFKED CCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHH LLKNSQKKLPVQELQTPLIIEEFISKHELGNNKIKNDPNAFNKLMNDAHGRGSGTEKGVL HHCCHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH KSGAYSSQHNSSIRISTAFGYEEDPIDVNEIDLNSKDLYIFIESAIIEAQKLLQINKTGN CCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHHHEECCCCC FEKWNELRIGIINAVNQHFTKTIGDTRRPINDVTLWDQTVSSVAFFKAELAEGLINGYKD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PFDENSKYTFRYLHMTFNGEEYLAKGIGIGDIASRRKLIDEAFDGVKLIIEVEYPLGLEI CCCCCCCEEEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHH YRDINGITFLIPKLSEKLEIDDLIINEGVTLKQRILDEVIAITKGEITPYFYISEKSSRN HHCCCCEEEEECHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC LYNLGSMISKKTDTNIPSLRLQNLWIQKAELCSSCCIKPVDSNSMRNKQKRLCQECSERI HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH TGRAKQWLDSRKEQTIWIDEIADSKGKIALLSFGFNLNSWIGNADSLSTFRNLKKTVGFS HHHHHHHHHCCCCCEEEEEHHCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHCHH FAELMRELTTPVKLLEMQKLKSIGNKYVLRDRKTADGLYNFMVGSEDLEVNKELTKYEKL HHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHH ALSIWRKPPSFARVRRVWETTSKFWGDALADIRKTVGMRDKRLILKIQANNLRDLNVNNA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCCE YEVKVNGIRFTVFYEANNPKGANEFSNFVIIENLELLAKKLNIDTKSNWKNLVDGIKEIL EEEEEEEEEEEEEEECCCCCCCHHHCCEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHH NGKNIDFYNSNSPTKKLAISRIGDIEIESCSYSPVIEITKDPERFMVLVPANKALKVAKK CCCCCEEECCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEEEEECCCHHHHHHHH IKKKYEKEMGKVRNRLPMNLGIVYARYHTALPAIIDAGRRFMRLNNKQETWRLAKQPDEF HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCHHHHHCCCHHHHHHHHCCCCCC PDHFKLSFENGQIWKIPSKMGDGSKDIWYPYFYVVNNDKAELENRSLSFKGPSGEWLIHV CCCEEEEECCCCEEECCHHCCCCCCCEEEEEEEEEECCHHHHCCCCEEECCCCCCEEEEE SELKIGDEILVIPSYFDFEYLSSASQRFEISYNDKNNKVQRRSDNRKQRPYYLDDLDDIE EEECCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCCCEECCCHHHHH RVWATLSTKLPNSQIKKLNSLVEKKRRDWASSLEDNDEVFKAYVEYVVGNLKWKPSLSND HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCCCCC ERKKIIDFCVNGKLSDVLEIHMSILKDKTGVIE HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SKDLTVLAENRDVLLTAEIAAWLHMLGKYTKEFIDSDLSMSSKLPNSISKNLRRLFKED CCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHH LLKNSQKKLPVQELQTPLIIEEFISKHELGNNKIKNDPNAFNKLMNDAHGRGSGTEKGVL HHCCHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH KSGAYSSQHNSSIRISTAFGYEEDPIDVNEIDLNSKDLYIFIESAIIEAQKLLQINKTGN CCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHHHEECCCCC FEKWNELRIGIINAVNQHFTKTIGDTRRPINDVTLWDQTVSSVAFFKAELAEGLINGYKD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PFDENSKYTFRYLHMTFNGEEYLAKGIGIGDIASRRKLIDEAFDGVKLIIEVEYPLGLEI CCCCCCCEEEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHH YRDINGITFLIPKLSEKLEIDDLIINEGVTLKQRILDEVIAITKGEITPYFYISEKSSRN HHCCCCEEEEECHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC LYNLGSMISKKTDTNIPSLRLQNLWIQKAELCSSCCIKPVDSNSMRNKQKRLCQECSERI HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH TGRAKQWLDSRKEQTIWIDEIADSKGKIALLSFGFNLNSWIGNADSLSTFRNLKKTVGFS HHHHHHHHHCCCCCEEEEEHHCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHCHH FAELMRELTTPVKLLEMQKLKSIGNKYVLRDRKTADGLYNFMVGSEDLEVNKELTKYEKL HHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHH ALSIWRKPPSFARVRRVWETTSKFWGDALADIRKTVGMRDKRLILKIQANNLRDLNVNNA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCCE YEVKVNGIRFTVFYEANNPKGANEFSNFVIIENLELLAKKLNIDTKSNWKNLVDGIKEIL EEEEEEEEEEEEEEECCCCCCCHHHCCEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHH NGKNIDFYNSNSPTKKLAISRIGDIEIESCSYSPVIEITKDPERFMVLVPANKALKVAKK CCCCCEEECCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEEEEECCCHHHHHHHH IKKKYEKEMGKVRNRLPMNLGIVYARYHTALPAIIDAGRRFMRLNNKQETWRLAKQPDEF HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCHHHHHCCCHHHHHHHHCCCCCC PDHFKLSFENGQIWKIPSKMGDGSKDIWYPYFYVVNNDKAELENRSLSFKGPSGEWLIHV CCCEEEEECCCCEEECCHHCCCCCCCEEEEEEEEEECCHHHHCCCCEEECCCCCCEEEEE SELKIGDEILVIPSYFDFEYLSSASQRFEISYNDKNNKVQRRSDNRKQRPYYLDDLDDIE EEECCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCCCEECCCHHHHH RVWATLSTKLPNSQIKKLNSLVEKKRRDWASSLEDNDEVFKAYVEYVVGNLKWKPSLSND HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCCCCC ERKKIIDFCVNGKLSDVLEIHMSILKDKTGVIE HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA