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The map label for this gene is rsgA [H]

Identifier: 239617037

GI number: 239617037

Start: 682895

End: 683797

Strand: Reverse

Name: rsgA [H]

Synonym: Kole_0638

Alternate gene names: 239617037

Gene position: 683797-682895 (Counterclockwise)

Preceding gene: 239617038

Following gene: 239617036

Centisome position: 29.7

GC content: 43.63

Gene sequence:

>903_bases
TTGAGAGGAATTGTAATAAATGTTCAGAAAGGACTGTACAAAGTAAGACCGGTAAACGATGGCGAAGACATTAACTGTAC
CCTTAGGGGCAGGCTTTTCAAACAAAGCCAGACAACCAAGTCGATGGTCGTGGTAGGTGACTACGTAGAATTTCAACCTG
TTCTGGGAGGCAGGGGAGTGATAACCGCAATAGAAGAACGGAAAAGTAAATTGGTCAGAAAGGGGGCCGGTAAAAAAGGT
TCTCACCTGGAGCAGGTTGTGGCTGCAAATGTCGATCAGGCAATACTTGTATTTGCGGTTAAAAATCCGAAATACAGAAA
AAATCTTATAGAGAGGTACATCGTATCGGCAAAGTACGGCGGAATAGAACCAGTCATTTGCTTCAACAAAATAGATCTAA
TAAATCTATCGGAAGTGCAGGAAGATATCAAAGAATGCAGAAAGCTTGGTTATACGGTACTGCTCACCAGTACCATAACG
GGAGAAGGGATAAAGAAGCTAAAATCTCTCTTGAAAGATAAAATTTCTGTCTTTGCTGGAAGCTCCGGAGTCGGGAAATC
CTCGTTGGTGAACGCCATCTTTAATGAAAAAAAGACAAAGACGAATGAAGTGAGCACCAGTCATTACAAGGGCAAGCACA
CCACAACATCGTCACAGGTTTATGAGCTTCCTTTCGGGGGGCGGATAATAGACGTTCCCGGAATGAGGGAGTTTGGAGTG
ATTGATAACGGAACGGGAATCAGAGACGCTTTTCCGGATATCATAGAACTTGCTAAACACTGCAAGTTTAGAGACTGCAA
CCATATAAATGAGCCCGGGTGTGCCGTGAAAGAAGCGATTGAGTCGGGCCTCCTGGAAGAGCGAAGATACAGGAATTATC
TTAAGTTAAAGAAATCAGGCTGA

Upstream 100 bases:

>100_bases
AATGGAAGGCCACGCTGTGTCGAAGCTGTGGCCTTTTTTGTTTGTAAAAAACGAGCAACCACGGCTAAAACCGTGGTGCT
TTTTTAGGAGGTAGAGAAAA

Downstream 100 bases:

>100_bases
AGAATCTGATTAATATCAATGCCTACCTATCCTGTATTTAGTGATGCTTCCTTACCTCTGTTATAATAACCTGTAACTAT
CTTGAGGTAGGCATACGAAA

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRGIVINVQKGLYKVRPVNDGEDINCTLRGRLFKQSQTTKSMVVVGDYVEFQPVLGGRGVITAIEERKSKLVRKGAGKKG
SHLEQVVAANVDQAILVFAVKNPKYRKNLIERYIVSAKYGGIEPVICFNKIDLINLSEVQEDIKECRKLGYTVLLTSTIT
GEGIKKLKSLLKDKISVFAGSSGVGKSSLVNAIFNEKKTKTNEVSTSHYKGKHTTTSSQVYELPFGGRIIDVPGMREFGV
IDNGTGIRDAFPDIIELAKHCKFRDCNHINEPGCAVKEAIESGLLEERRYRNYLKLKKSG

Sequences:

>Translated_300_residues
MRGIVINVQKGLYKVRPVNDGEDINCTLRGRLFKQSQTTKSMVVVGDYVEFQPVLGGRGVITAIEERKSKLVRKGAGKKG
SHLEQVVAANVDQAILVFAVKNPKYRKNLIERYIVSAKYGGIEPVICFNKIDLINLSEVQEDIKECRKLGYTVLLTSTIT
GEGIKKLKSLLKDKISVFAGSSGVGKSSLVNAIFNEKKTKTNEVSTSHYKGKHTTTSSQVYELPFGGRIIDVPGMREFGV
IDNGTGIRDAFPDIIELAKHCKFRDCNHINEPGCAVKEAIESGLLEERRYRNYLKLKKSG
>Mature_300_residues
MRGIVINVQKGLYKVRPVNDGEDINCTLRGRLFKQSQTTKSMVVVGDYVEFQPVLGGRGVITAIEERKSKLVRKGAGKKG
SHLEQVVAANVDQAILVFAVKNPKYRKNLIERYIVSAKYGGIEPVICFNKIDLINLSEVQEDIKECRKLGYTVLLTSTIT
GEGIKKLKSLLKDKISVFAGSSGVGKSSLVNAIFNEKKTKTNEVSTSHYKGKHTTTSSQVYELPFGGRIIDVPGMREFGV
IDNGTGIRDAFPDIIELAKHCKFRDCNHINEPGCAVKEAIESGLLEERRYRNYLKLKKSG

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=310, Percent_Identity=37.741935483871, Blast_Score=191, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 33268; Mature: 33268

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIVINVQKGLYKVRPVNDGEDINCTLRGRLFKQSQTTKSMVVVGDYVEFQPVLGGRGV
CCCEEEEECCCEEEEECCCCCCCEEEEEECEEHHCCCCCCEEEEEECCEEEEECCCCCCH
ITAIEERKSKLVRKGAGKKGSHLEQVVAANVDQAILVFAVKNPKYRKNLIERYIVSAKYG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCC
GIEPVICFNKIDLINLSEVQEDIKECRKLGYTVLLTSTITGEGIKKLKSLLKDKISVFAG
CCCEEEEECCCCEEEHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
SSGVGKSSLVNAIFNEKKTKTNEVSTSHYKGKHTTTSSQVYELPFGGRIIDVPGMREFGV
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCE
IDNGTGIRDAFPDIIELAKHCKFRDCNHINEPGCAVKEAIESGLLEERRYRNYLKLKKSG
EECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MRGIVINVQKGLYKVRPVNDGEDINCTLRGRLFKQSQTTKSMVVVGDYVEFQPVLGGRGV
CCCEEEEECCCEEEEECCCCCCCEEEEEECEEHHCCCCCCEEEEEECCEEEEECCCCCCH
ITAIEERKSKLVRKGAGKKGSHLEQVVAANVDQAILVFAVKNPKYRKNLIERYIVSAKYG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCC
GIEPVICFNKIDLINLSEVQEDIKECRKLGYTVLLTSTITGEGIKKLKSLLKDKISVFAG
CCCEEEEECCCCEEEHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
SSGVGKSSLVNAIFNEKKTKTNEVSTSHYKGKHTTTSSQVYELPFGGRIIDVPGMREFGV
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCE
IDNGTGIRDAFPDIIELAKHCKFRDCNHINEPGCAVKEAIESGLLEERRYRNYLKLKKSG
EECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]