| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is asrA [H]
Identifier: 239616975
GI number: 239616975
Start: 622680
End: 623687
Strand: Reverse
Name: asrA [H]
Synonym: Kole_0574
Alternate gene names: 239616975
Gene position: 623687-622680 (Counterclockwise)
Preceding gene: 239616976
Following gene: 239616974
Centisome position: 27.09
GC content: 40.87
Gene sequence:
>1008_bases ATGCTCGTCTTTTTTGAGGAGTTTGTTGAATTTCTCGAGAGATTGGCCGAAAGAACCGAACTATTCGCTCCGGTCAAGGA AAATGGAGAAATATTCTTAAAATGCTGGAAAAGCATGGATAGCGATGGGATTCCTGTGCTCGATAAATATCACCCCATTG ATCCTTTGAAGATTTTGCTGTTCCAACCAAGAAATGATGTTTTGACGTATCTTGAGAGTGGGGAACGAATTCTTCTGGGG GTTAAAAGCTGCGATCTTCGAGCGATACAACTTTTAGACATCGCACTTCTTGAAGGGGATTATGTTGATCCTGTTTATAA AGAGTTTCGGGAAAAAACTTTGATAATCTCTTCAGATTGCACAGAAGCGAAAAGTAGCTGTCATTGCATTCTTCAGGGAA TAAATCCGTATCCGGAGGAACACTATGATGTTTCGCTTTCATCGATCGGCAAGCGTCTATTACTTCGCTCTGGAAGTGAA AAAGGAGAAAGATTTCTCAAATTACTGTCGAAGAATTTAACGGCATTTGAAGAGACACCTGATGTCGTTGATGTTCTCAA AAATCAAAGGGAAAAGATTAGAACCCTAGTATGTGAAATAAATTCACAGTGGTCGTTGGGAAGCAAGGACAAAGGCGAAA AGTTAAATATTTTCGATACCAGTGCTGTTGACAGCTGCATAGAATGTGGGGGATGTAATTTTGTCTGTCCTACCTGTTAC TGTTTCATTATGAGTGATGAGAGTAAAAATAAATCCTTCTCAAAGGTTCGTACCTGGGACAGCTGCCAGTTGAAGGGGTA TGCTCGCGTTGCTGGCGGCGGGAATCCTCGACCTGAGCTCTATAAACGTTTTAATCATAGGTATAATTGCAAATTCAATT ACATGGTGAAGCAGCTTAGTATGAGTGGTTGCACTGGTTGTGGAAGATGTATCGATGTTTGCCCTGCGGGTATAGACATC AGAAATACAATGAGGGTTATGCGAGAAGAAATGAAGGTGAAAAAATGA
Upstream 100 bases:
>100_bases TAGATTCAGAGGAGTAAGTTTATTTGATTTCGAAACCATTGTTTAGTAGGGTTATCGTTTAAAAATTGTTGTGAATTTTA TCACAAAGGGGAATACCAAA
Downstream 100 bases:
>100_bases CCAATGTTTTTGAAGCGATAAAGACAAAGTGTATAGAGATTGTAGAGGAGTCTTCAGTTATTAAAACCTTTGTTTTAGAG TGCGGTGAGGATTTTGAATT
Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Products: NA
Alternate protein names: Anaerobic sulfite reductase iron-sulfur subunit [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MLVFFEEFVEFLERLAERTELFAPVKENGEIFLKCWKSMDSDGIPVLDKYHPIDPLKILLFQPRNDVLTYLESGERILLG VKSCDLRAIQLLDIALLEGDYVDPVYKEFREKTLIISSDCTEAKSSCHCILQGINPYPEEHYDVSLSSIGKRLLLRSGSE KGERFLKLLSKNLTAFEETPDVVDVLKNQREKIRTLVCEINSQWSLGSKDKGEKLNIFDTSAVDSCIECGGCNFVCPTCY CFIMSDESKNKSFSKVRTWDSCQLKGYARVAGGGNPRPELYKRFNHRYNCKFNYMVKQLSMSGCTGCGRCIDVCPAGIDI RNTMRVMREEMKVKK
Sequences:
>Translated_335_residues MLVFFEEFVEFLERLAERTELFAPVKENGEIFLKCWKSMDSDGIPVLDKYHPIDPLKILLFQPRNDVLTYLESGERILLG VKSCDLRAIQLLDIALLEGDYVDPVYKEFREKTLIISSDCTEAKSSCHCILQGINPYPEEHYDVSLSSIGKRLLLRSGSE KGERFLKLLSKNLTAFEETPDVVDVLKNQREKIRTLVCEINSQWSLGSKDKGEKLNIFDTSAVDSCIECGGCNFVCPTCY CFIMSDESKNKSFSKVRTWDSCQLKGYARVAGGGNPRPELYKRFNHRYNCKFNYMVKQLSMSGCTGCGRCIDVCPAGIDI RNTMRVMREEMKVKK >Mature_335_residues MLVFFEEFVEFLERLAERTELFAPVKENGEIFLKCWKSMDSDGIPVLDKYHPIDPLKILLFQPRNDVLTYLESGERILLG VKSCDLRAIQLLDIALLEGDYVDPVYKEFREKTLIISSDCTEAKSSCHCILQGINPYPEEHYDVSLSSIGKRLLLRSGSE KGERFLKLLSKNLTAFEETPDVVDVLKNQREKIRTLVCEINSQWSLGSKDKGEKLNIFDTSAVDSCIECGGCNFVCPTCY CFIMSDESKNKSFSKVRTWDSCQLKGYARVAGGGNPRPELYKRFNHRYNCKFNYMVKQLSMSGCTGCGRCIDVCPAGIDI RNTMRVMREEMKVKK
Specific function: Electron transfer protein for anaerobic sulfite reductase subunit A [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR014259 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38260; Mature: 38260
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVFFEEFVEFLERLAERTELFAPVKENGEIFLKCWKSMDSDGIPVLDKYHPIDPLKILL CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEE FQPRNDVLTYLESGERILLGVKSCDLRAIQLLDIALLEGDYVDPVYKEFREKTLIISSDC ECCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEECCC TEAKSSCHCILQGINPYPEEHYDVSLSSIGKRLLLRSGSEKGERFLKLLSKNLTAFEETP HHHHHHHHHHEECCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCC DVVDVLKNQREKIRTLVCEINSQWSLGSKDKGEKLNIFDTSAVDSCIECGGCNFVCPTCY HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCEECCCEE CFIMSDESKNKSFSKVRTWDSCQLKGYARVAGGGNPRPELYKRFNHRYNCKFNYMVKQLS EEEECCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHH MSGCTGCGRCIDVCPAGIDIRNTMRVMREEMKVKK HCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLVFFEEFVEFLERLAERTELFAPVKENGEIFLKCWKSMDSDGIPVLDKYHPIDPLKILL CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEE FQPRNDVLTYLESGERILLGVKSCDLRAIQLLDIALLEGDYVDPVYKEFREKTLIISSDC ECCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEECCC TEAKSSCHCILQGINPYPEEHYDVSLSSIGKRLLLRSGSEKGERFLKLLSKNLTAFEETP HHHHHHHHHHEECCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCC DVVDVLKNQREKIRTLVCEINSQWSLGSKDKGEKLNIFDTSAVDSCIECGGCNFVCPTCY HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCEECCCEE CFIMSDESKNKSFSKVRTWDSCQLKGYARVAGGGNPRPELYKRFNHRYNCKFNYMVKQLS EEEECCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHH MSGCTGCGRCIDVCPAGIDIRNTMRVMREEMKVKK HCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1704886; 11677609 [H]