| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616735
Identifier: 239616735
GI number: 239616735
Start: 348678
End: 349214
Strand: Direct
Name: 239616735
Synonym: Kole_0328
Alternate gene names: NA
Gene position: 348678-349214 (Clockwise)
Preceding gene: 239616734
Following gene: 239616736
Centisome position: 15.15
GC content: 36.13
Gene sequence:
>537_bases ATGGGTGGCTTTAGCAATGAAAAAGAAATAATAAAGCTTCAGCTTGGTAGAGATATAGAAAATGATTTTACCGTTGTTAG AAGGTGTAGCTGGGGATATCCGCAGTGTATAAAATCTTCATTGATTACAAATGGAAAACCTTTTCCCACATTGTTTTGGT TGACATGCCCACTTCTCTTGAAGGAAATTTCAAAGCTCGAAGAAAAAGGTATGATTAAAACCATAGAAAGCAGGCTGGAA AACGACGAAAACTTTATGAAAGCATATGTGAAAGCACATAAGGAAACCAAAGATTTGAAAGAACAACTCCTTGCTTCTCT TTCAATAAGTGAATGGCAACGCAATGCCATTATTGAGAGAGGCATAGGCGGCATAAAAGATCTAAAACGTGTAAAATGTC TCCATCTCCAGTTAGCAAATTACATGGGAGGCATAAAGAATCCCATTGGAGAATTGATCTGGAAAATTATTGAACTTCAA GAATGTCCACCAAACGATATCATCTGTGATAGGCTGGTGAATAAATTTGAAAAATAA
Upstream 100 bases:
>100_bases GAATACTGATACTTTCAGGAATCATCAGTAACAAAGAAGAAAAGTTCACAGAAGAACTAAAGCGTCATTATTTGCTTCTG GAACGAAAGGCGGAAGGAGA
Downstream 100 bases:
>100_bases GCTCCTGGCAAAGGTTCGGGAACTTCCCGAGAAACCCGGGATTTACTTATTCAAAAACAAAAAGGGAGAAATTATATACA TTGGAAAAGCAAAAAAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MGGFSNEKEIIKLQLGRDIENDFTVVRRCSWGYPQCIKSSLITNGKPFPTLFWLTCPLLLKEISKLEEKGMIKTIESRLE NDENFMKAYVKAHKETKDLKEQLLASLSISEWQRNAIIERGIGGIKDLKRVKCLHLQLANYMGGIKNPIGELIWKIIELQ ECPPNDIICDRLVNKFEK
Sequences:
>Translated_178_residues MGGFSNEKEIIKLQLGRDIENDFTVVRRCSWGYPQCIKSSLITNGKPFPTLFWLTCPLLLKEISKLEEKGMIKTIESRLE NDENFMKAYVKAHKETKDLKEQLLASLSISEWQRNAIIERGIGGIKDLKRVKCLHLQLANYMGGIKNPIGELIWKIIELQ ECPPNDIICDRLVNKFEK >Mature_177_residues GGFSNEKEIIKLQLGRDIENDFTVVRRCSWGYPQCIKSSLITNGKPFPTLFWLTCPLLLKEISKLEEKGMIKTIESRLEN DENFMKAYVKAHKETKDLKEQLLASLSISEWQRNAIIERGIGGIKDLKRVKCLHLQLANYMGGIKNPIGELIWKIIELQE CPPNDIICDRLVNKFEK
Specific function: Unknown
COG id: COG1507
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20522; Mature: 20391
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFSNEKEIIKLQLGRDIENDFTVVRRCSWGYPQCIKSSLITNGKPFPTLFWLTCPLLL CCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH KEISKLEEKGMIKTIESRLENDENFMKAYVKAHKETKDLKEQLLASLSISEWQRNAIIER HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGGIKDLKRVKCLHLQLANYMGGIKNPIGELIWKIIELQECPPNDIICDRLVNKFEK CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure GGFSNEKEIIKLQLGRDIENDFTVVRRCSWGYPQCIKSSLITNGKPFPTLFWLTCPLLL CCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH KEISKLEEKGMIKTIESRLENDENFMKAYVKAHKETKDLKEQLLASLSISEWQRNAIIER HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGGIKDLKRVKCLHLQLANYMGGIKNPIGELIWKIIELQECPPNDIICDRLVNKFEK CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA