| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yqeH [H]
Identifier: 239616645
GI number: 239616645
Start: 265632
End: 266738
Strand: Direct
Name: yqeH [H]
Synonym: Kole_0238
Alternate gene names: 239616645
Gene position: 265632-266738 (Clockwise)
Preceding gene: 239616644
Following gene: 239616646
Centisome position: 11.54
GC content: 42.01
Gene sequence:
>1107_bases ATGAAGTGTAAAGGCTGTGGAGTGGAAATACAGACGTTTAACGATGATGTACCCGGATATATTCCGGCAGACGTTCTCGA AAGAAGGCAAAAAGAGGGTAAAGAGATACTTTGTCAGCGTTGTTTCCATCTCAAGCATTATGGAAAGTTCAAAAAGGAAA AGAAAGGTGTAAAATCTCTCGATAGCTTGAAGAAATACCTGCACCTCGCTAAAAATGTTATTTATGTGATAGATATTTTC GATTTCGATGGAACCTACAGAGAGGAAATAGTCGAACTTTTGAAAGAACACAATGTTTATTATGTTATAAACAAGGTGGA TCTGGTTCCCAAAGAAGTTGCTCCACCGGAAATAAAAAAATGGGCTCGAGACAGGTTAAAGGTACAATCAACTCGTGTAA AACTACTGTCAGCAAAAGTTGGAAGAGGTGTATCAGGTTTCGTTAAATTTTTAAAGAGCAAAAAAGACAGGCGGTTTCTC GTTGTTGGTGTGACAAATGTCGGAAAGTCGTCGGTACTGAATGCCCTCACCGGTGAAGGCCAACTCACCGCCAGTAAATA TCCTGGAACGACTCTTGAGCTTGTTCAGTTAAAAAACGAGGATACAGGCCTGACACTGATAGACACTCCCGGAATTTTCA CAAATGATCGGGTTACCGATCTCCTCGATCCATGGTGCCAGGCAAAGATTATGCCACAAAAGAAATTGACAGTAACAACC ATTAACGCCAAGAAAGACAGGACTGTCTTTTTCAGCAGCTTCGTTTCTATTACTGTCAAAGGTTATAAAGGAAGACGATC GCCCATATTCCATATACTTACCTCTGAAAATGTGGTTGTTCATGAAACCAACCCGGAAAAAGCTGAAGAGCGCTGGTCTG AGTGGTTTGGTCGGTTTCTCGTTCCCCCCTGTGGAAATAGCGGGTTTGATAATTATAAATTTGAAAACCATCAACTGAGA CTGGAAGCCGGGCAGGAAATCCATATTTGTGGTCTCGGCTGGGTCAACGTAGCACGTGGGCCGGCTGAATTTACACTGAA ACTCCCCGAGAGTGTAAAATGGGTTGTTAGGGATGCGCTTATTGGTCCATATAAATTCAAAAAATGA
Upstream 100 bases:
>100_bases TCTCTAATAAGGAATTCTTCTGGACACGAATCATGAGAAAACTGGAAGCAGTTGTGTTGAAGATTATAGAGTCCAGTGCG GAACTGAAGGAGATTGATAA
Downstream 100 bases:
>100_bases AGCTGGAGGTGTTTCTGTGAAACTCAAAAAACTTCCGATCAAAGCTGGTGTTTCTAACAGACACGTTCATCTGTCTCAGG AGCATCTGGAAATTCTCTTT
Product: GTP-binding protein HSR1-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKCKGCGVEIQTFNDDVPGYIPADVLERRQKEGKEILCQRCFHLKHYGKFKKEKKGVKSLDSLKKYLHLAKNVIYVIDIF DFDGTYREEIVELLKEHNVYYVINKVDLVPKEVAPPEIKKWARDRLKVQSTRVKLLSAKVGRGVSGFVKFLKSKKDRRFL VVGVTNVGKSSVLNALTGEGQLTASKYPGTTLELVQLKNEDTGLTLIDTPGIFTNDRVTDLLDPWCQAKIMPQKKLTVTT INAKKDRTVFFSSFVSITVKGYKGRRSPIFHILTSENVVVHETNPEKAEERWSEWFGRFLVPPCGNSGFDNYKFENHQLR LEAGQEIHICGLGWVNVARGPAEFTLKLPESVKWVVRDALIGPYKFKK
Sequences:
>Translated_368_residues MKCKGCGVEIQTFNDDVPGYIPADVLERRQKEGKEILCQRCFHLKHYGKFKKEKKGVKSLDSLKKYLHLAKNVIYVIDIF DFDGTYREEIVELLKEHNVYYVINKVDLVPKEVAPPEIKKWARDRLKVQSTRVKLLSAKVGRGVSGFVKFLKSKKDRRFL VVGVTNVGKSSVLNALTGEGQLTASKYPGTTLELVQLKNEDTGLTLIDTPGIFTNDRVTDLLDPWCQAKIMPQKKLTVTT INAKKDRTVFFSSFVSITVKGYKGRRSPIFHILTSENVVVHETNPEKAEERWSEWFGRFLVPPCGNSGFDNYKFENHQLR LEAGQEIHICGLGWVNVARGPAEFTLKLPESVKWVVRDALIGPYKFKK >Mature_368_residues MKCKGCGVEIQTFNDDVPGYIPADVLERRQKEGKEILCQRCFHLKHYGKFKKEKKGVKSLDSLKKYLHLAKNVIYVIDIF DFDGTYREEIVELLKEHNVYYVINKVDLVPKEVAPPEIKKWARDRLKVQSTRVKLLSAKVGRGVSGFVKFLKSKKDRRFL VVGVTNVGKSSVLNALTGEGQLTASKYPGTTLELVQLKNEDTGLTLIDTPGIFTNDRVTDLLDPWCQAKIMPQKKLTVTT INAKKDRTVFFSSFVSITVKGYKGRRSPIFHILTSENVVVHETNPEKAEERWSEWFGRFLVPPCGNSGFDNYKFENHQLR LEAGQEIHICGLGWVNVARGPAEFTLKLPESVKWVVRDALIGPYKFKK
Specific function: Binds GTP and GDP [H]
COG id: COG1161
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Drosophila melanogaster, GI28573544, Length=225, Percent_Identity=28.8888888888889, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019988 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 41938; Mature: 41938
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCKGCGVEIQTFNDDVPGYIPADVLERRQKEGKEILCQRCFHLKHYGKFKKEKKGVKSL CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLKKYLHLAKNVIYVIDIFDFDGTYREEIVELLKEHNVYYVINKVDLVPKEVAPPEIKK HHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHH WARDRLKVQSTRVKLLSAKVGRGVSGFVKFLKSKKDRRFLVVGVTNVGKSSVLNALTGEG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCC QLTASKYPGTTLELVQLKNEDTGLTLIDTPGIFTNDRVTDLLDPWCQAKIMPQKKLTVTT EEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHCHHHHCEECCCCCEEEEE INAKKDRTVFFSSFVSITVKGYKGRRSPIFHILTSENVVVHETNPEKAEERWSEWFGRFL ECCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCEE VPPCGNSGFDNYKFENHQLRLEAGQEIHICGLGWVNVARGPAEFTLKLPESVKWVVRDAL CCCCCCCCCCCCEECCCEEEEECCCEEEEEECCHHHHCCCCCEEEEECCHHHHHHHHHHH IGPYKFKK CCCCCCCC >Mature Secondary Structure MKCKGCGVEIQTFNDDVPGYIPADVLERRQKEGKEILCQRCFHLKHYGKFKKEKKGVKSL CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLKKYLHLAKNVIYVIDIFDFDGTYREEIVELLKEHNVYYVINKVDLVPKEVAPPEIKK HHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHH WARDRLKVQSTRVKLLSAKVGRGVSGFVKFLKSKKDRRFLVVGVTNVGKSSVLNALTGEG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCC QLTASKYPGTTLELVQLKNEDTGLTLIDTPGIFTNDRVTDLLDPWCQAKIMPQKKLTVTT EEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHCHHHHCEECCCCCEEEEE INAKKDRTVFFSSFVSITVKGYKGRRSPIFHILTSENVVVHETNPEKAEERWSEWFGRFL ECCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCEE VPPCGNSGFDNYKFENHQLRLEAGQEIHICGLGWVNVARGPAEFTLKLPESVKWVVRDAL CCCCCCCCCCCCEECCCEEEEECCCEEEEEECCHHHHCCCCCEEEEECCHHHHHHHHHHH IGPYKFKK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]