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The map label for this gene is ugpA [C]

Identifier: 239616574

GI number: 239616574

Start: 182935

End: 183828

Strand: Direct

Name: ugpA [C]

Synonym: Kole_0166

Alternate gene names: 239616574

Gene position: 182935-183828 (Clockwise)

Preceding gene: 239616573

Following gene: 239616575

Centisome position: 7.95

GC content: 34.23

Gene sequence:

>894_bases
ATGATCAGTAAATACATGAAGAATGAAAAACTAACAGGATGGATATTTGCGACCCCTTCTTTAATTGTTTTGGGGGCGGT
TATAGCCGTCCCCCTTATTTACTCATTCATAGTGAGCTTTTCTGATTATACTTTTGTTAGTCCTTTCTTTAATTTTGTGG
GATTCCAAAATTATCTTGCCGCTTTTCAAGATAGTTATTTTTGGAATTCTTTAAAGGTAACTCTAAAGTTCGTGGTACTT
GTTGTATCAATGGAATTTGCTATCGGATTTGTGATAGCACTGATGTTGAATAGAGAAATTAGATTAAAAAAGCTATATTA
TACAATTTTGACACTCCCAATGGTTATGAGTCCAGTTGCAGTAGGTTTGATATGGAAAATGTTATTACACCCAGATCTTG
GAGTCATAAACTATTTTATAACTTCTCTCGGCTTGAAGCCTGTAAATTGGCTAGCTAATAGTACAAATGCCTTCTGGACA
TTAATCATGGTTGACATATGGCAACAGGTTTCTTTTATGATTCTCTTGCTTCTCGCTGGACTTGTTTCATTGCCAAAAGA
ACCTTACGAAGCTGCAACTATAGACGGAGCAAATGAAACACAAAAATTTCTTTATATAACTCTTCCACTAATGAAACCAG
TCATTGCAGCTGCGATTACTATTAGAATAATACTAGCCTTTAGAACATATGACCTTGTTTATGTTCTTACAAAAGGAGGT
CCAGGAGTCAAAACCGAGGTATTAAGTTACTTTATTTATCGAAAAACCTTCATGGGACTAAATTTATCTGAGGCTTCGGC
TACTTCATATATTCTACTTTTAGTAGTCATGGTTATAGTAATATTAGCCTTTCGATTTATTCTTAAGAGTCAAAATATCG
GTGAACAACAATAA

Upstream 100 bases:

>100_bases
AAAAGAGTATTTCAAAAGCACTCGACACGATTGCAAAAGAGCTTGATAAACTTTCCAAGCTTGCAAAACTCTGGAAAAAA
TAAGTGGGGTGAAGGGGCTA

Downstream 100 bases:

>100_bases
ACTCGAAGGTGTTTTATTCCAGCAGAGGTGTGTATTATGAATATAAAAACCATGATTAAGGCTGCAGAAGCAGCGGGTAA
ATTAGCATTAAAGTACTTCA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MISKYMKNEKLTGWIFATPSLIVLGAVIAVPLIYSFIVSFSDYTFVSPFFNFVGFQNYLAAFQDSYFWNSLKVTLKFVVL
VVSMEFAIGFVIALMLNREIRLKKLYYTILTLPMVMSPVAVGLIWKMLLHPDLGVINYFITSLGLKPVNWLANSTNAFWT
LIMVDIWQQVSFMILLLLAGLVSLPKEPYEAATIDGANETQKFLYITLPLMKPVIAAAITIRIILAFRTYDLVYVLTKGG
PGVKTEVLSYFIYRKTFMGLNLSEASATSYILLLVVMVIVILAFRFILKSQNIGEQQ

Sequences:

>Translated_297_residues
MISKYMKNEKLTGWIFATPSLIVLGAVIAVPLIYSFIVSFSDYTFVSPFFNFVGFQNYLAAFQDSYFWNSLKVTLKFVVL
VVSMEFAIGFVIALMLNREIRLKKLYYTILTLPMVMSPVAVGLIWKMLLHPDLGVINYFITSLGLKPVNWLANSTNAFWT
LIMVDIWQQVSFMILLLLAGLVSLPKEPYEAATIDGANETQKFLYITLPLMKPVIAAAITIRIILAFRTYDLVYVLTKGG
PGVKTEVLSYFIYRKTFMGLNLSEASATSYILLLVVMVIVILAFRFILKSQNIGEQQ
>Mature_297_residues
MISKYMKNEKLTGWIFATPSLIVLGAVIAVPLIYSFIVSFSDYTFVSPFFNFVGFQNYLAAFQDSYFWNSLKVTLKFVVL
VVSMEFAIGFVIALMLNREIRLKKLYYTILTLPMVMSPVAVGLIWKMLLHPDLGVINYFITSLGLKPVNWLANSTNAFWT
LIMVDIWQQVSFMILLLLAGLVSLPKEPYEAATIDGANETQKFLYITLPLMKPVIAAAITIRIILAFRTYDLVYVLTKGG
PGVKTEVLSYFIYRKTFMGLNLSEASATSYILLLVVMVIVILAFRFILKSQNIGEQQ

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=238, Percent_Identity=32.3529411764706, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787570, Length=235, Percent_Identity=31.4893617021277, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=29.9212598425197, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33608; Mature: 33608

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKYMKNEKLTGWIFATPSLIVLGAVIAVPLIYSFIVSFSDYTFVSPFFNFVGFQNYLA
CCCCHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AFQDSYFWNSLKVTLKFVVLVVSMEFAIGFVIALMLNREIRLKKLYYTILTLPMVMSPVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VGLIWKMLLHPDLGVINYFITSLGLKPVNWLANSTNAFWTLIMVDIWQQVSFMILLLLAG
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVSLPKEPYEAATIDGANETQKFLYITLPLMKPVIAAAITIRIILAFRTYDLVYVLTKGG
HHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCC
PGVKTEVLSYFIYRKTFMGLNLSEASATSYILLLVVMVIVILAFRFILKSQNIGEQQ
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISKYMKNEKLTGWIFATPSLIVLGAVIAVPLIYSFIVSFSDYTFVSPFFNFVGFQNYLA
CCCCHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AFQDSYFWNSLKVTLKFVVLVVSMEFAIGFVIALMLNREIRLKKLYYTILTLPMVMSPVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VGLIWKMLLHPDLGVINYFITSLGLKPVNWLANSTNAFWTLIMVDIWQQVSFMILLLLAG
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVSLPKEPYEAATIDGANETQKFLYITLPLMKPVIAAAITIRIILAFRTYDLVYVLTKGG
HHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCC
PGVKTEVLSYFIYRKTFMGLNLSEASATSYILLLVVMVIVILAFRFILKSQNIGEQQ
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]