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The map label for this gene is ycjP [C]

Identifier: 239616572

GI number: 239616572

Start: 180794

End: 181615

Strand: Direct

Name: ycjP [C]

Synonym: Kole_0164

Alternate gene names: 239616572

Gene position: 180794-181615 (Clockwise)

Preceding gene: 239616571

Following gene: 239616573

Centisome position: 7.85

GC content: 36.62

Gene sequence:

>822_bases
ATGACAAGATCTGAAAAACGTTGGAACATAATAGCTCATGCCGTTTTGATAGTATTTTCAATATTAATCCTTTTTCCAAT
CATCTGGACGATTAGAACGAGTTTCGCCAGTGATGTAATCGCTTATGAAATCCCTCCAAAACTTATTTTCAAGCCTACTA
TCAAGAATTATATGGATATTTTTGTGGAAAATAACTTTTTGTTATACTTCAGAAACAGCTTTATTGTCTCCATAGTTTCT
ACTTTAATTTCCATACCTATAGCTTCATTGGCCGCATATGCTTTCGCAAGATACAATGTAGGAGGGAGTAAATTTAGAAT
GCTTATAATTCAAACTCAGATGTTGCCGCCTGTTGTATTAATCATTCCTCTTTTTGTTATCTTTATGAAATTAGGTTTGA
CAAACACACTGACGGGATTGATAATCTCTTACCTTGCCTTTAATTTACCATTTCTTATCTGGACATTAATAGGATTCTTC
GAATCAATTCCTCGGTCAATAGAAGAAGCAGCGTTGATAGATGGAGCAAATAGATTTGTTGCTTTTGTCAGAGTGGTCTT
TCCCATAGCCGCCCCTGGAATAATGGCAGCCGCAGTTTTCAGTTTTATATTGTGCTGGAACGAGTTTCTCTTCTCACTTG
TTTTGTCTGGACCAGGTACCGCAACTATCCCCGTCAGGTTGGCTGCACTTCAAACTTCTAGAGGAGTGTTGATTGGAAAA
CTTTCAGCTGGAGTTGTAATTGCGATATTACCAATAGTCATATTAAGTCAGTTTATTCAAAAATACCTTGTAAGAGGATT
AAGCTTTGGGGCCATAAAGTAA

Upstream 100 bases:

>100_bases
ACGCAGACTTTCTCACCGGCCAGGCAATAAATGTTACTGGGGGAGCATGTACACATTGATTCGCTCCCGTAAAATTTTCT
GCGAACGAGGGGGGAGTTAA

Downstream 100 bases:

>100_bases
CACCCTTTGACTTATAACCTTTCCATTGGAGGTGGGGAAATGAGGAAATTCTGGTTTGCACTTTTACTTTTGGTAATTTC
TACGAGTCTTATGGCGACGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTRSEKRWNIIAHAVLIVFSILILFPIIWTIRTSFASDVIAYEIPPKLIFKPTIKNYMDIFVENNFLLYFRNSFIVSIVS
TLISIPIASLAAYAFARYNVGGSKFRMLIIQTQMLPPVVLIIPLFVIFMKLGLTNTLTGLIISYLAFNLPFLIWTLIGFF
ESIPRSIEEAALIDGANRFVAFVRVVFPIAAPGIMAAAVFSFILCWNEFLFSLVLSGPGTATIPVRLAALQTSRGVLIGK
LSAGVVIAILPIVILSQFIQKYLVRGLSFGAIK

Sequences:

>Translated_273_residues
MTRSEKRWNIIAHAVLIVFSILILFPIIWTIRTSFASDVIAYEIPPKLIFKPTIKNYMDIFVENNFLLYFRNSFIVSIVS
TLISIPIASLAAYAFARYNVGGSKFRMLIIQTQMLPPVVLIIPLFVIFMKLGLTNTLTGLIISYLAFNLPFLIWTLIGFF
ESIPRSIEEAALIDGANRFVAFVRVVFPIAAPGIMAAAVFSFILCWNEFLFSLVLSGPGTATIPVRLAALQTSRGVLIGK
LSAGVVIAILPIVILSQFIQKYLVRGLSFGAIK
>Mature_272_residues
TRSEKRWNIIAHAVLIVFSILILFPIIWTIRTSFASDVIAYEIPPKLIFKPTIKNYMDIFVENNFLLYFRNSFIVSIVST
LISIPIASLAAYAFARYNVGGSKFRMLIIQTQMLPPVVLIIPLFVIFMKLGLTNTLTGLIISYLAFNLPFLIWTLIGFFE
SIPRSIEEAALIDGANRFVAFVRVVFPIAAPGIMAAAVFSFILCWNEFLFSLVLSGPGTATIPVRLAALQTSRGVLIGKL
SAGVVIAILPIVILSQFIQKYLVRGLSFGAIK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=269, Percent_Identity=34.2007434944238, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1790464, Length=292, Percent_Identity=30.4794520547945, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787368, Length=223, Percent_Identity=26.9058295964126, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789860, Length=278, Percent_Identity=26.978417266187, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30314; Mature: 30183

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSEKRWNIIAHAVLIVFSILILFPIIWTIRTSFASDVIAYEIPPKLIFKPTIKNYMDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHEECHHHHHHHHH
FVENNFLLYFRNSFIVSIVSTLISIPIASLAAYAFARYNVGGSKFRMLIIQTQMLPPVVL
HHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHH
IIPLFVIFMKLGLTNTLTGLIISYLAFNLPFLIWTLIGFFESIPRSIEEAALIDGANRFV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AFVRVVFPIAAPGIMAAAVFSFILCWNEFLFSLVLSGPGTATIPVRLAALQTSRGVLIGK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHEEHHCCCCEEEEE
LSAGVVIAILPIVILSQFIQKYLVRGLSFGAIK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TRSEKRWNIIAHAVLIVFSILILFPIIWTIRTSFASDVIAYEIPPKLIFKPTIKNYMDI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHEECHHHHHHHHH
FVENNFLLYFRNSFIVSIVSTLISIPIASLAAYAFARYNVGGSKFRMLIIQTQMLPPVVL
HHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHH
IIPLFVIFMKLGLTNTLTGLIISYLAFNLPFLIWTLIGFFESIPRSIEEAALIDGANRFV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AFVRVVFPIAAPGIMAAAVFSFILCWNEFLFSLVLSGPGTATIPVRLAALQTSRGVLIGK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHEEHHCCCCEEEEE
LSAGVVIAILPIVILSQFIQKYLVRGLSFGAIK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]