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The map label for this gene is 239616498

Identifier: 239616498

GI number: 239616498

Start: 102411

End: 103001

Strand: Direct

Name: 239616498

Synonym: Kole_0088

Alternate gene names: NA

Gene position: 102411-103001 (Clockwise)

Preceding gene: 239616494

Following gene: 239616499

Centisome position: 4.45

GC content: 40.1

Gene sequence:

>591_bases
ATGAAAAAGAAGTTCAATCGTGTGTACCAATTTAAGATTACGCTAAAGGGTATTAAGCCACCAATATGGCGACGAATACA
GGTTCCAGAGACCTATACATTTTGGGATTTGCATGTTGCCATTCAAGACGCCATGGGATGGTTAGATTATCATCTACATG
AATTCGAAATAATAAACCCTTCAACTGGGCTAAAGGTGAATATAGGGATTCCAGATGAGGATTTTGGTCGTGATGTTCTT
CCGGGTTGGAAACAAAAAATAGCTGATTATTTTTCAATGGAAAATCCAAAAGCAAATTACACCTATGATTTTGGCGATAA
TTGGGAACATAAGATAGAGCTGGAAAAGATTCTTCCTCGGGAAAAAGGGGTTACTTATCCAGTATGTATCAAAGGGAAAA
GAGCATGTCCACCTGAAGATTGTGGAGGTGTCTGGGGATACGAAGAACTGCTGGAAGCTATAAAAGACCCCGCTCATGAG
AGGCACGAAGAATTGTTGGAGTGGCTTGGTGAGGACTTTGACCCGGAGCATTTTGATGTAAATGAGGTCAGTTTTGACGA
TCCCAACAAACGTCTAAAAAACATTTTTTGA

Upstream 100 bases:

>100_bases
AGCTTTGTATACACGCATAACATTAGACGAAACGTGTTTATGTGATTTGAAAGATGTTTATAACCACAAGAATTTATAGT
GGCTAATAGGAGGGGTCACA

Downstream 100 bases:

>100_bases
TGGAAGGCTCACAATGCTTAACGCGACATATACATTACGCTTTGCTTTAGATATACATCATTTTTTCCCTCTTGTACACC
GCCTCCGGAATTTGGCAAAG

Product: plasmid pRiA4b ORF-3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKKKFNRVYQFKITLKGIKPPIWRRIQVPETYTFWDLHVAIQDAMGWLDYHLHEFEIINPSTGLKVNIGIPDEDFGRDVL
PGWKQKIADYFSMENPKANYTYDFGDNWEHKIELEKILPREKGVTYPVCIKGKRACPPEDCGGVWGYEELLEAIKDPAHE
RHEELLEWLGEDFDPEHFDVNEVSFDDPNKRLKNIF

Sequences:

>Translated_196_residues
MKKKFNRVYQFKITLKGIKPPIWRRIQVPETYTFWDLHVAIQDAMGWLDYHLHEFEIINPSTGLKVNIGIPDEDFGRDVL
PGWKQKIADYFSMENPKANYTYDFGDNWEHKIELEKILPREKGVTYPVCIKGKRACPPEDCGGVWGYEELLEAIKDPAHE
RHEELLEWLGEDFDPEHFDVNEVSFDDPNKRLKNIF
>Mature_196_residues
MKKKFNRVYQFKITLKGIKPPIWRRIQVPETYTFWDLHVAIQDAMGWLDYHLHEFEIINPSTGLKVNIGIPDEDFGRDVL
PGWKQKIADYFSMENPKANYTYDFGDNWEHKIELEKILPREKGVTYPVCIKGKRACPPEDCGGVWGYEELLEAIKDPAHE
RHEELLEWLGEDFDPEHFDVNEVSFDDPNKRLKNIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 23169; Mature: 23169

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFNRVYQFKITLKGIKPPIWRRIQVPETYTFWDLHVAIQDAMGWLDYHLHEFEIINP
CCCCCCEEEEEEEEEECCCCCHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHEEEEEECC
STGLKVNIGIPDEDFGRDVLPGWKQKIADYFSMENPKANYTYDFGDNWEHKIELEKILPR
CCCEEEEECCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEHHHHCCH
EKGVTYPVCIKGKRACPPEDCGGVWGYEELLEAIKDPAHERHEELLEWLGEDFDPEHFDV
HCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
NEVSFDDPNKRLKNIF
CCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKKKFNRVYQFKITLKGIKPPIWRRIQVPETYTFWDLHVAIQDAMGWLDYHLHEFEIINP
CCCCCCEEEEEEEEEECCCCCHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHEEEEEECC
STGLKVNIGIPDEDFGRDVLPGWKQKIADYFSMENPKANYTYDFGDNWEHKIELEKILPR
CCCEEEEECCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEHHHHCCH
EKGVTYPVCIKGKRACPPEDCGGVWGYEELLEAIKDPAHERHEELLEWLGEDFDPEHFDV
HCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
NEVSFDDPNKRLKNIF
CCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]