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The map label for this gene is ywqE [H]

Identifier: 239616424

GI number: 239616424

Start: 17509

End: 18198

Strand: Direct

Name: ywqE [H]

Synonym: Kole_0013

Alternate gene names: 239616424

Gene position: 17509-18198 (Clockwise)

Preceding gene: 239616423

Following gene: 239616425

Centisome position: 0.76

GC content: 42.32

Gene sequence:

>690_bases
TTGGTCAACGTGGAGATGCACTGCCACCTTTTGCCCGGTGTGGATGATGGGGCGCGTGATGTAGAAGAAGCTCTCGAGCT
AATAAATGAAATGAAAGATCTCGGTGTTGAAAGAATTTACCTGACACCGCACCTTTACTCGCCAAAGGTACCAACGGATA
TCTCAAAAATAAAAAAAGCCTTTTCGCAATTCAAAGAAATAGTATCAAATGAGGTCGAAATTCTCCCGGGTTCAGAAATC
TATCTGGTTCCCGGGGTGAGCAACAGGGAGTTAATTCCGCTTGGGGACACAAATTTCTTACTCATTGAACTCCCCACGGA
CATTCCACCACTTTACCTATGGGAGGAGATAGACAGACTCCAACGAAAAGGTTATGTATTGATTCTGGCACATGTGGAAA
GGTACGGATACTTTTACAAGTGTTCTGGTTTGCTATCACAGTTGTTTCGGTGCAAGCAGCCGAAAAAGGAATTCTTTGAC
AGACTTCGCCAGCAAGGGGTCCTTTTTCAGGTTAACTGGGATATTCTTTCACCAAAAACCGGAAAAACTCCGAAACACAT
CAGGAATCTGTTAGAGATAACCTTTGTAGATTTCACAGGAAGCGATAAGCATAGAAGAAATGATTCCCGGCAGCTCATAG
ATTTTTCCACTCAGCTATATAAAGATCTAAGAAATGGAGAATTATTATAA

Upstream 100 bases:

>100_bases
GGGAGTGATTTCTTCTCTGCTTACGATCATATATACTGGAAAGTTGATCGCAGCACCATAGAAATAATTGTAATTAAACG
AAATGATAGGAGTGTCCTAT

Downstream 100 bases:

>100_bases
AAAATAATCATTCAGTGTTATGGGGGTGCTTTTGTGAACGAGCTCGATAATGAATACAGAGAACTAACCCTTGAAGATAT
TTTGAGGATGTTCAAAAAGA

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MVNVEMHCHLLPGVDDGARDVEEALELINEMKDLGVERIYLTPHLYSPKVPTDISKIKKAFSQFKEIVSNEVEILPGSEI
YLVPGVSNRELIPLGDTNFLLIELPTDIPPLYLWEEIDRLQRKGYVLILAHVERYGYFYKCSGLLSQLFRCKQPKKEFFD
RLRQQGVLFQVNWDILSPKTGKTPKHIRNLLEITFVDFTGSDKHRRNDSRQLIDFSTQLYKDLRNGELL

Sequences:

>Translated_229_residues
MVNVEMHCHLLPGVDDGARDVEEALELINEMKDLGVERIYLTPHLYSPKVPTDISKIKKAFSQFKEIVSNEVEILPGSEI
YLVPGVSNRELIPLGDTNFLLIELPTDIPPLYLWEEIDRLQRKGYVLILAHVERYGYFYKCSGLLSQLFRCKQPKKEFFD
RLRQQGVLFQVNWDILSPKTGKTPKHIRNLLEITFVDFTGSDKHRRNDSRQLIDFSTQLYKDLRNGELL
>Mature_229_residues
MVNVEMHCHLLPGVDDGARDVEEALELINEMKDLGVERIYLTPHLYSPKVPTDISKIKKAFSQFKEIVSNEVEILPGSEI
YLVPGVSNRELIPLGDTNFLLIELPTDIPPLYLWEEIDRLQRKGYVLILAHVERYGYFYKCSGLLSQLFRCKQPKKEFFD
RLRQQGVLFQVNWDILSPKTGKTPKHIRNLLEITFVDFTGSDKHRRNDSRQLIDFSTQLYKDLRNGELL

Specific function: Dephosphorylates the phosphotyrosine-containing proteins YwqD, YwqF and Ssb [H]

COG id: COG4464

COG function: function code GM; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsB/CapC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016667
- InterPro:   IPR004013
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 26634; Mature: 26634

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNVEMHCHLLPGVDDGARDVEEALELINEMKDLGVERIYLTPHLYSPKVPTDISKIKKA
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHH
FSQFKEIVSNEVEILPGSEIYLVPGVSNRELIPLGDTNFLLIELPTDIPPLYLWEEIDRL
HHHHHHHHCCCEEEECCCCEEEECCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHH
QRKGYVLILAHVERYGYFYKCSGLLSQLFRCKQPKKEFFDRLRQQGVLFQVNWDILSPKT
HHCCEEEEEEEHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECEEECCCC
GKTPKHIRNLLEITFVDFTGSDKHRRNDSRQLIDFSTQLYKDLRNGELL
CCCHHHHHHHHHEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVNVEMHCHLLPGVDDGARDVEEALELINEMKDLGVERIYLTPHLYSPKVPTDISKIKKA
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHH
FSQFKEIVSNEVEILPGSEIYLVPGVSNRELIPLGDTNFLLIELPTDIPPLYLWEEIDRL
HHHHHHHHCCCEEEECCCCEEEECCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHH
QRKGYVLILAHVERYGYFYKCSGLLSQLFRCKQPKKEFFDRLRQQGVLFQVNWDILSPKT
HHCCEEEEEEEHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECEEECCCC
GKTPKHIRNLLEITFVDFTGSDKHRRNDSRQLIDFSTQLYKDLRNGELL
CCCHHHHHHHHHEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]