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The map label for this gene is ssb [H]

Identifier: 238925608

GI number: 238925608

Start: 3102371

End: 3102814

Strand: Reverse

Name: ssb [H]

Synonym: EUBREC_3264

Alternate gene names: 238925608

Gene position: 3102814-3102371 (Counterclockwise)

Preceding gene: 238925609

Following gene: 238925607

Centisome position: 89.94

GC content: 47.3

Gene sequence:

>444_bases
ATGAACAAAGTAATACTTATGGGTAGATTAACCAGAGACGCAGAAATCCGCTATGCCCAGGGGGACAACTCACTTGCAAT
AGCAAGATTTTCACTTGCGGTAGACAGACGATACAGCAAGAATGCAGAGGAGCAGTCAACGGATTTCATCAACTGCGTAG
CTTTTGGAAAGATAGCAGAATTTTTTGAGAGATTTGGCCGTAAAGGAACAAAATTTGTTGTTGAGGGCCGAATCCAGACC
GGCAGCTATACAAACAAGGACGGACAGAAGGTATACACCACTGACGTCGTGGTTGAAAATGCAGAGTTTGCAGAGTCTAA
ATCAGCCGCATCAGGAAATGCAGGCGGATTTGCACCGGCAGACAGACCTGCACCTAGCCAGGCTGCTGGGGATGGCTTCA
TGAACATTCCGGACGGAATCGACGAGGAGCTTCCATTCAATTAG

Upstream 100 bases:

>100_bases
AGCAGAAATCGAGCAGGACGTTCGTATCATGGACAATGTTCTTCGTTTCTTATGCGTTAGAAAAGACGAGGCATAGTATA
AGAAAATAGGAGATTGTATT

Downstream 100 bases:

>100_bases
TAGTGTCCACGAGGACAAATATTCAAGGAGGTAACAAAAATGGCTTACAATAAATCAGCTGATGGTTCATCAATGAAGAG
AAGACCAATGCGTAGAAGAA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNKVILMGRLTRDAEIRYAQGDNSLAIARFSLAVDRRYSKNAEEQSTDFINCVAFGKIAEFFERFGRKGTKFVVEGRIQT
GSYTNKDGQKVYTTDVVVENAEFAESKSAASGNAGGFAPADRPAPSQAAGDGFMNIPDGIDEELPFN

Sequences:

>Translated_147_residues
MNKVILMGRLTRDAEIRYAQGDNSLAIARFSLAVDRRYSKNAEEQSTDFINCVAFGKIAEFFERFGRKGTKFVVEGRIQT
GSYTNKDGQKVYTTDVVVENAEFAESKSAASGNAGGFAPADRPAPSQAAGDGFMNIPDGIDEELPFN
>Mature_147_residues
MNKVILMGRLTRDAEIRYAQGDNSLAIARFSLAVDRRYSKNAEEQSTDFINCVAFGKIAEFFERFGRKGTKFVVEGRIQT
GSYTNKDGQKVYTTDVVVENAEFAESKSAASGNAGGFAPADRPAPSQAAGDGFMNIPDGIDEELPFN

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=123, Percent_Identity=36.5853658536585, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16031; Mature: 16031

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVILMGRLTRDAEIRYAQGDNSLAIARFSLAVDRRYSKNAEEQSTDFINCVAFGKIAE
CCCEEEEEECCCCCEEEEECCCCCEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
FFERFGRKGTKFVVEGRIQTGSYTNKDGQKVYTTDVVVENAEFAESKSAASGNAGGFAPA
HHHHHCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCCCC
DRPAPSQAAGDGFMNIPDGIDEELPFN
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKVILMGRLTRDAEIRYAQGDNSLAIARFSLAVDRRYSKNAEEQSTDFINCVAFGKIAE
CCCEEEEEECCCCCEEEEECCCCCEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
FFERFGRKGTKFVVEGRIQTGSYTNKDGQKVYTTDVVVENAEFAESKSAASGNAGGFAPA
HHHHHCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCCCC
DRPAPSQAAGDGFMNIPDGIDEELPFN
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]