| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is dnaC [H]
Identifier: 238925602
GI number: 238925602
Start: 3096359
End: 3097663
Strand: Reverse
Name: dnaC [H]
Synonym: EUBREC_3258
Alternate gene names: 238925602
Gene position: 3097663-3096359 (Counterclockwise)
Preceding gene: 238925603
Following gene: 238925601
Centisome position: 89.8
GC content: 50.27
Gene sequence:
>1305_bases ATGCCAAACAGCCTTGAGGCAGAGCAGTCCGTGGTCGGCTCCATGATTATGAGCAAGGATGCCATAGTGACCGCCAGCGA GATGCTCCTTAAGGAGGATTTTTATCATCAGCAGTACGGCATCATATTTGAGACCATGGTTGAGCTCTTTACAGAGGGTC AGCCTGTAGATCTCGTCACACTCCAGAACCGTTTAAAGGAAAAGGATGTGCCGCAGGAAATACAAAGCCTTGACTTTGTG AGAACTCTCGTCACCAGTGTGCCGACCTCTGCCAACATCAAGTATTATGCCAATATCGTAAAGGAAAATGCCATAAAGCG AAAGCTCATCCATGTGACTGAGGACATAGAGAACGAGTGCTACGCCGGCAAAGAATCTCTCGAGAGCGTGCTCGACAAGA CAGAGCACGATGTATTTGAACTGCTTTCCACAAGGCAGACAGGTGACTACGTGCCAATCCGTACTGTAGTCATGAATGCC CTCGAGAAAATCGAAAAAGCAGCACAGCAGGAGGGCACAGTAACAGGAATCCCGACAGGCTTCATAGACCTTGACTACAG GACAGCGGGACTTCAGCCGTCAGATCTCGTGCTTGTGGCAGCCCGTCCGTCAATGGGAAAGACAGCCTTCGTGCTCAACA TAGCACAGCATGTGGCATTTCATGCACATCTGTGTACAGCCATATTCTCACTCGAGATGTCGAAGGAGCAGCTCGTAAAC CGTCTGTTCTCACTCGAATCAAAGGTAGATGCGCAGGCACTGCGTACAGGAAATCTGTCTGATGCCGACTGGGAAAAGCT GGTCGAGGGAGCCGGAATCATCGGAGACTCCGAGCTCATCATAGACGACACTCCGGGTATCAGCATATCAGAGCTTCGAA GCAAGTGCCGTAAATACAAGCTCGAACACGACTTAAAGCTCATCATCATCGATTACCTGCAGCTCATGACAGGCTCAGGA CGAGGCTCAGAATCGCGTCAGCAGGAAATCTCAGACATATCACGTTCGCTTAAGGCACTTGCCAGAGAGCTTTCAGTTCC TGTAGTGGCACTCTCCCAGCTATCACGAGCTGTAGAGCAGCGTCCGGACCACAGGCCTATGCTTTCTGATCTTCGAGAGT CAGGAGCTATCGAGCAGGATGCCGATGTCGTCATGTTCATCTATCGTGACGATTACTACAACAAGGACACCGAGCTCAAG GGTATCTCAGAGATCATCATCGCTAAACAGCGTAACGGTCCAATCGGCACCGTAAACCTTGCATGGCTGCCTGAGTACAC GAAGTTTGCAAATCTGGAGCATTAA
Upstream 100 bases:
>100_bases TGCCTGTCAAGCTTCATCCAAAGGTAACAGCAAACCTCACAGTATCAGTAGTTGAAGGATAGGAGGAATCCCCTTGGAAG AAGCATTAATCAAACGAATA
Downstream 100 bases:
>100_bases GACTAAAACACAAAAAGAATAAAGAGACAAGCCATCCCGGCTCACGTCATAGGATAAAGTTAAGTATCCCGATGTGGGCC GGGATTTTTCAAAATCTCTT
Product: replicative DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MPNSLEAEQSVVGSMIMSKDAIVTASEMLLKEDFYHQQYGIIFETMVELFTEGQPVDLVTLQNRLKEKDVPQEIQSLDFV RTLVTSVPTSANIKYYANIVKENAIKRKLIHVTEDIENECYAGKESLESVLDKTEHDVFELLSTRQTGDYVPIRTVVMNA LEKIEKAAQQEGTVTGIPTGFIDLDYRTAGLQPSDLVLVAARPSMGKTAFVLNIAQHVAFHAHLCTAIFSLEMSKEQLVN RLFSLESKVDAQALRTGNLSDADWEKLVEGAGIIGDSELIIDDTPGISISELRSKCRKYKLEHDLKLIIIDYLQLMTGSG RGSESRQQEISDISRSLKALARELSVPVVALSQLSRAVEQRPDHRPMLSDLRESGAIEQDADVVMFIYRDDYYNKDTELK GISEIIIAKQRNGPIGTVNLAWLPEYTKFANLEH
Sequences:
>Translated_434_residues MPNSLEAEQSVVGSMIMSKDAIVTASEMLLKEDFYHQQYGIIFETMVELFTEGQPVDLVTLQNRLKEKDVPQEIQSLDFV RTLVTSVPTSANIKYYANIVKENAIKRKLIHVTEDIENECYAGKESLESVLDKTEHDVFELLSTRQTGDYVPIRTVVMNA LEKIEKAAQQEGTVTGIPTGFIDLDYRTAGLQPSDLVLVAARPSMGKTAFVLNIAQHVAFHAHLCTAIFSLEMSKEQLVN RLFSLESKVDAQALRTGNLSDADWEKLVEGAGIIGDSELIIDDTPGISISELRSKCRKYKLEHDLKLIIIDYLQLMTGSG RGSESRQQEISDISRSLKALARELSVPVVALSQLSRAVEQRPDHRPMLSDLRESGAIEQDADVVMFIYRDDYYNKDTELK GISEIIIAKQRNGPIGTVNLAWLPEYTKFANLEH >Mature_433_residues PNSLEAEQSVVGSMIMSKDAIVTASEMLLKEDFYHQQYGIIFETMVELFTEGQPVDLVTLQNRLKEKDVPQEIQSLDFVR TLVTSVPTSANIKYYANIVKENAIKRKLIHVTEDIENECYAGKESLESVLDKTEHDVFELLSTRQTGDYVPIRTVVMNAL EKIEKAAQQEGTVTGIPTGFIDLDYRTAGLQPSDLVLVAARPSMGKTAFVLNIAQHVAFHAHLCTAIFSLEMSKEQLVNR LFSLESKVDAQALRTGNLSDADWEKLVEGAGIIGDSELIIDDTPGISISELRSKCRKYKLEHDLKLIIIDYLQLMTGSGR GSESRQQEISDISRSLKALARELSVPVVALSQLSRAVEQRPDHRPMLSDLRESGAIEQDADVVMFIYRDDYYNKDTELKG ISEIIIAKQRNGPIGTVNLAWLPEYTKFANLEH
Specific function: Participates In Initiation And Elongation During Chromosome Replication; It Exhibits DNA-Dependent ATPase Activity And Contains Distinct Active Sites For ATP Binding, DNA Binding, And Interaction With DNAc Protein, Primase, And Other Prepriming Proteins.
COG id: COG0305
COG function: function code L; Replicative DNA helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SF4 helicase domain [H]
Homologues:
Organism=Escherichia coli, GI1790486, Length=437, Percent_Identity=45.3089244851259, Blast_Score=359, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR007692 - InterPro: IPR007694 - InterPro: IPR007693 - InterPro: IPR016136 [H]
Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 48597; Mature: 48466
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSLEAEQSVVGSMIMSKDAIVTASEMLLKEDFYHQQYGIIFETMVELFTEGQPVDLVT CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH LQNRLKEKDVPQEIQSLDFVRTLVTSVPTSANIKYYANIVKENAIKRKLIHVTEDIENEC HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAGKESLESVLDKTEHDVFELLSTRQTGDYVPIRTVVMNALEKIEKAAQQEGTVTGIPTG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCC FIDLDYRTAGLQPSDLVLVAARPSMGKTAFVLNIAQHVAFHAHLCTAIFSLEMSKEQLVN EEEECCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RLFSLESKVDAQALRTGNLSDADWEKLVEGAGIIGDSELIIDDTPGISISELRSKCRKYK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH LEHDLKLIIIDYLQLMTGSGRGSESRQQEISDISRSLKALARELSVPVVALSQLSRAVEQ HCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC RPDHRPMLSDLRESGAIEQDADVVMFIYRDDYYNKDTELKGISEIIIAKQRNGPIGTVNL CCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHEEECCCCCEEEEEE AWLPEYTKFANLEH EECCCHHHHCCCCC >Mature Secondary Structure PNSLEAEQSVVGSMIMSKDAIVTASEMLLKEDFYHQQYGIIFETMVELFTEGQPVDLVT CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH LQNRLKEKDVPQEIQSLDFVRTLVTSVPTSANIKYYANIVKENAIKRKLIHVTEDIENEC HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAGKESLESVLDKTEHDVFELLSTRQTGDYVPIRTVVMNALEKIEKAAQQEGTVTGIPTG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCC FIDLDYRTAGLQPSDLVLVAARPSMGKTAFVLNIAQHVAFHAHLCTAIFSLEMSKEQLVN EEEECCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RLFSLESKVDAQALRTGNLSDADWEKLVEGAGIIGDSELIIDDTPGISISELRSKCRKYK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH LEHDLKLIIIDYLQLMTGSGRGSESRQQEISDISRSLKALARELSVPVVALSQLSRAVEQ HCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC RPDHRPMLSDLRESGAIEQDADVVMFIYRDDYYNKDTELKGISEIIIAKQRNGPIGTVNL CCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHEEECCCCCEEEEEE AWLPEYTKFANLEH EECCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 1312531 [H]