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The map label for this gene is yfbE [C]

Identifier: 238925584

GI number: 238925584

Start: 3079882

End: 3081006

Strand: Reverse

Name: yfbE [C]

Synonym: EUBREC_3240

Alternate gene names: 238925584

Gene position: 3081006-3079882 (Counterclockwise)

Preceding gene: 238925585

Following gene: 238925583

Centisome position: 89.31

GC content: 42.13

Gene sequence:

>1125_bases
ATGATACCATACGGAAAACAAACAATAGATCAAGATGACATTCAGGCAGTTGTAGATGTCCTCCAATCAGATTCCCTTAC
AACAGGACCAAAGATTGCAGAATTTGAGCAGACTGTGGCTGATTATGTTGGAGCTAAATATGCAGTTGCCATTTCAAACG
GCACATCTGCTCTTCATGCAGCTTGCTTTGCGGCAGGGATTGGACCGGGAGATGAGGTTATTACCACACCGCTTACGTTT
GCAGCATCTGCAAACTGTGTACTGTATTGTGGCGGTACACCTGTATTTGCTGATGTTGATCCGAAGACTTACAATATAGA
CCCAGAGGATATTCAAAGAAAGATTACTGACAGGACAAAGGCAATCATAGCTGTTCATTTAGCTGGTCAGCCTTGTGATA
TGGATGCTATACACAGCATTGCGCGTGAGCATGGACTTATTGTAATCGAGGACGGAGCGCATGCACTTGGCTCTGTTTAC
AAGGGCAAGAAGGTAGGTAGTATGTCTGATATGACTACATTCAGCTTCCATCCGGTGAAGCCGATTACCACAGGCGAGGG
TGGTATGATAGTCACTGACAATGAGGACTTTTATAAAAAGATGATTCTTTTCCGCAGTCATGGCATTACAAGAGATGATT
CTATGATGACAAGGAATGATGGACCGTGGTTTTATCAGCAGTTTGATTTGGGCTACAATTACAGGATAACTGATATCCAG
TGTGCCTTAGGCTGTAGTCAGATGAAGAAGCTGGACAGATTTTTAGCACGCCGAAAGGAAATTGTTGCACATTATAATGA
GGCCTTTGCGGATTGTGACAATATTATCACACCTTATCAGCTTTCGGATACGGAAAGTGGTTGGCATCTGTACATAGTTC
AGGTGAAAAATTGTGATAGAAGACAGGTTTTTGAGAAAATGCGTGAAAAGGGAATCGGAGTGAATGTACATTATATTCCT
GTTTATATGCATCCGTATTATCAGGAGCATGGATATGAGAATGTGCATTGTGCTAATGCGGAGGAGATTTATTCTCATAT
TATTAGTCTGCCTTTGTATCCGGGATTGACATCTGAGCAGCAGGATTATGTTATTGATACCTTGAAGAGTTTGTGCGAGG
AATAG

Upstream 100 bases:

>100_bases
TTGCATCATATTGGAGAAATAAATATTATAAGAATCTTTTCAATAAGCCAGGGATAGGCTATAATATCTTTAGCTTATTT
TTTATAGGGAGTGTAGATAT

Downstream 100 bases:

>100_bases
AATGATGGATATAAAGTTATTCTATAATAATCAGCAGAGTATTAAGCTTTCTTATGAGATAGTCGAGAGCTTTAGAAAAC
AGAATTTCTACATTGCAACA

Product: glutamine--scyllo-inositol transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MIPYGKQTIDQDDIQAVVDVLQSDSLTTGPKIAEFEQTVADYVGAKYAVAISNGTSALHAACFAAGIGPGDEVITTPLTF
AASANCVLYCGGTPVFADVDPKTYNIDPEDIQRKITDRTKAIIAVHLAGQPCDMDAIHSIAREHGLIVIEDGAHALGSVY
KGKKVGSMSDMTTFSFHPVKPITTGEGGMIVTDNEDFYKKMILFRSHGITRDDSMMTRNDGPWFYQQFDLGYNYRITDIQ
CALGCSQMKKLDRFLARRKEIVAHYNEAFADCDNIITPYQLSDTESGWHLYIVQVKNCDRRQVFEKMREKGIGVNVHYIP
VYMHPYYQEHGYENVHCANAEEIYSHIISLPLYPGLTSEQQDYVIDTLKSLCEE

Sequences:

>Translated_374_residues
MIPYGKQTIDQDDIQAVVDVLQSDSLTTGPKIAEFEQTVADYVGAKYAVAISNGTSALHAACFAAGIGPGDEVITTPLTF
AASANCVLYCGGTPVFADVDPKTYNIDPEDIQRKITDRTKAIIAVHLAGQPCDMDAIHSIAREHGLIVIEDGAHALGSVY
KGKKVGSMSDMTTFSFHPVKPITTGEGGMIVTDNEDFYKKMILFRSHGITRDDSMMTRNDGPWFYQQFDLGYNYRITDIQ
CALGCSQMKKLDRFLARRKEIVAHYNEAFADCDNIITPYQLSDTESGWHLYIVQVKNCDRRQVFEKMREKGIGVNVHYIP
VYMHPYYQEHGYENVHCANAEEIYSHIISLPLYPGLTSEQQDYVIDTLKSLCEE
>Mature_374_residues
MIPYGKQTIDQDDIQAVVDVLQSDSLTTGPKIAEFEQTVADYVGAKYAVAISNGTSALHAACFAAGIGPGDEVITTPLTF
AASANCVLYCGGTPVFADVDPKTYNIDPEDIQRKITDRTKAIIAVHLAGQPCDMDAIHSIAREHGLIVIEDGAHALGSVY
KGKKVGSMSDMTTFSFHPVKPITTGEGGMIVTDNEDFYKKMILFRSHGITRDDSMMTRNDGPWFYQQFDLGYNYRITDIQ
CALGCSQMKKLDRFLARRKEIVAHYNEAFADCDNIITPYQLSDTESGWHLYIVQVKNCDRRQVFEKMREKGIGVNVHYIP
VYMHPYYQEHGYENVHCANAEEIYSHIISLPLYPGLTSEQQDYVIDTLKSLCEE

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=381, Percent_Identity=37.5328083989501, Blast_Score=255, Evalue=3e-69,
Organism=Escherichia coli, GI2367285, Length=378, Percent_Identity=29.1005291005291, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41773; Mature: 41773

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPYGKQTIDQDDIQAVVDVLQSDSLTTGPKIAEFEQTVADYVGAKYAVAISNGTSALHA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHH
ACFAAGIGPGDEVITTPLTFAASANCVLYCGGTPVFADVDPKTYNIDPEDIQRKITDRTK
HHHHCCCCCCCCEEECCEEEECCCCEEEEECCCEEEEECCCCEECCCHHHHHHHHHHHCE
AIIAVHLAGQPCDMDAIHSIAREHGLIVIEDGAHALGSVYKGKKVGSMSDMTTFSFHPVK
EEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCCCCCCCEEEECCCC
PITTGEGGMIVTDNEDFYKKMILFRSHGITRDDSMMTRNDGPWFYQQFDLGYNYRITDIQ
CEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEH
CALGCSQMKKLDRFLARRKEIVAHYNEAFADCDNIITPYQLSDTESGWHLYIVQVKNCDR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCH
RQVFEKMREKGIGVNVHYIPVYMHPYYQEHGYENVHCANAEEIYSHIISLPLYPGLTSEQ
HHHHHHHHHCCCCEEEEEEEEEECCHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC
QDYVIDTLKSLCEE
HHHHHHHHHHHHCC
>Mature Secondary Structure
MIPYGKQTIDQDDIQAVVDVLQSDSLTTGPKIAEFEQTVADYVGAKYAVAISNGTSALHA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHH
ACFAAGIGPGDEVITTPLTFAASANCVLYCGGTPVFADVDPKTYNIDPEDIQRKITDRTK
HHHHCCCCCCCCEEECCEEEECCCCEEEEECCCEEEEECCCCEECCCHHHHHHHHHHHCE
AIIAVHLAGQPCDMDAIHSIAREHGLIVIEDGAHALGSVYKGKKVGSMSDMTTFSFHPVK
EEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCCCCCCCEEEECCCC
PITTGEGGMIVTDNEDFYKKMILFRSHGITRDDSMMTRNDGPWFYQQFDLGYNYRITDIQ
CEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEH
CALGCSQMKKLDRFLARRKEIVAHYNEAFADCDNIITPYQLSDTESGWHLYIVQVKNCDR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCH
RQVFEKMREKGIGVNVHYIPVYMHPYYQEHGYENVHCANAEEIYSHIISLPLYPGLTSEQ
HHHHHHHHHCCCCEEEEEEEEEECCHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC
QDYVIDTLKSLCEE
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]