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The map label for this gene is 238925578

Identifier: 238925578

GI number: 238925578

Start: 3074248

End: 3075438

Strand: Reverse

Name: 238925578

Synonym: EUBREC_3234

Alternate gene names: NA

Gene position: 3075438-3074248 (Counterclockwise)

Preceding gene: 238925583

Following gene: 238925575

Centisome position: 89.15

GC content: 37.28

Gene sequence:

>1191_bases
ATGAACGCTATGAGAAGAACATATCTTACTCTGTCAGAGGAAGACAAAGATTACCTTAAAACATTATCAAAAAAAAGAAC
AATTCAGGCACAAATTGTAGATCGTGCCAAAATTTTATTATATAAATCTGATGGCATGACTTTCAACGCTATCGCTGAAA
AACTTGCCATTAGTTCAGCAACCGTACGGCTTTGTGTTTCTAAATATTACGAGGGCGGTATTGAAAAAGCTCTTTTTGAT
ACTCAGCGCCCCGGACGCCCATCTGAAATTACAGATGATGCAAAAGCATGGATCATCAATCTTGCTTGTCAGAGACCAGT
AGAACTTGGCTATGCACAGGAACTTTGGACTTTAAATGCTCTTCATAAGCATATTCAGAAACACGCAGAAGAAGCAGGAT
ATCCAAGACTTACAACCATTACTAAACCTTATATTCAGAAATTCCTCAAGGAACAGGATATCAAACCATTCAAAATCAGG
TATTATTGTGAGAAGCGAGATCAAGATTTTGAATCAAAAATGCACGAAGTTCTCTTGGTTTACAAACAGATTGAAATGCA
GTTTGATGAAAATGGTACACTCATTGTTCCAGATGATTATAAACTGACAATCACGGTATCATATGATGAAAAACCAGGCA
TACAGGCAATTTCCAATACAGCACCGGATTTACGCCCGACAACAGAAAATGGCGAGGTATATCGTGATGCGGAATACAAA
CGTCTGGGAACACTTTCTTTATTAGCTGGTATCGATCTTCTTACAGGAGAAGCCATCCCATTGGTAAGTGAAACACACAA
GAGTTCTGACTTTATTGAATTTTTAAAAATACGGGACAAAAAATATCCATTGCAGGATACCATCAGAATCATTCTTGATA
ACCACTCAGCACATACATCCAAAGAAACACAGCGATTTTTGGATACGATGCCAAAAGGTCGGTTTAAATTTGTATTCACA
CCAAAGCATGGTTCTTGGTTAAACATGATTGAAAGTTTCTTTAGCAAGATGACGAAACAAATGCTGCGTGGAATTCGTGT
CAAAACCAAACAGGAATTGGAAGAACGAATTTACCAGTATTTTGAAGAAGTTAACCGCGAGCCAGTAGTTTACCATTGGA
AATATAAAATGGATGAAATAGAAAAGAAAAAGTGCTGTACAGAGCTTTGGATGCCTTTTAGTGCTCATTAA

Upstream 100 bases:

>100_bases
CATAAGTATAGTAAAATACTAGCATTTCCTGATACTTATTATGAGTTGATAATTAACTTGTTGCAATCCGTCGAATTATT
TTGCGCTTACTAAGAAAGGG

Downstream 100 bases:

>100_bases
AAAGTGTCTGGAAGCTGTGCACAGCACATGAAAAACATGGCTGAGAACGGGAAATAAAGTTCTCTGTTTTGCACAAAAAT
ATCAGAATCAGGTAGAAGTG

Product: putative inactivated transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Feruloyl Esterase; ISRSO5-Transposase Protein; ISMsm2 Transposase; Isrso5-Transposase Protein; Integrase Catalytic Subunit; ISMsm5 Transposase; Inactivated Transposase; Transposase And Inactivated Derivatives-Like Protein; LOW QUALITY PROTEIN Transposase; Aminoglycoside Phosphotransferase; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of; ISPsy1 Transposase; Transposase Fragment

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNAMRRTYLTLSEEDKDYLKTLSKKRTIQAQIVDRAKILLYKSDGMTFNAIAEKLAISSATVRLCVSKYYEGGIEKALFD
TQRPGRPSEITDDAKAWIINLACQRPVELGYAQELWTLNALHKHIQKHAEEAGYPRLTTITKPYIQKFLKEQDIKPFKIR
YYCEKRDQDFESKMHEVLLVYKQIEMQFDENGTLIVPDDYKLTITVSYDEKPGIQAISNTAPDLRPTTENGEVYRDAEYK
RLGTLSLLAGIDLLTGEAIPLVSETHKSSDFIEFLKIRDKKYPLQDTIRIILDNHSAHTSKETQRFLDTMPKGRFKFVFT
PKHGSWLNMIESFFSKMTKQMLRGIRVKTKQELEERIYQYFEEVNREPVVYHWKYKMDEIEKKKCCTELWMPFSAH

Sequences:

>Translated_396_residues
MNAMRRTYLTLSEEDKDYLKTLSKKRTIQAQIVDRAKILLYKSDGMTFNAIAEKLAISSATVRLCVSKYYEGGIEKALFD
TQRPGRPSEITDDAKAWIINLACQRPVELGYAQELWTLNALHKHIQKHAEEAGYPRLTTITKPYIQKFLKEQDIKPFKIR
YYCEKRDQDFESKMHEVLLVYKQIEMQFDENGTLIVPDDYKLTITVSYDEKPGIQAISNTAPDLRPTTENGEVYRDAEYK
RLGTLSLLAGIDLLTGEAIPLVSETHKSSDFIEFLKIRDKKYPLQDTIRIILDNHSAHTSKETQRFLDTMPKGRFKFVFT
PKHGSWLNMIESFFSKMTKQMLRGIRVKTKQELEERIYQYFEEVNREPVVYHWKYKMDEIEKKKCCTELWMPFSAH
>Mature_396_residues
MNAMRRTYLTLSEEDKDYLKTLSKKRTIQAQIVDRAKILLYKSDGMTFNAIAEKLAISSATVRLCVSKYYEGGIEKALFD
TQRPGRPSEITDDAKAWIINLACQRPVELGYAQELWTLNALHKHIQKHAEEAGYPRLTTITKPYIQKFLKEQDIKPFKIR
YYCEKRDQDFESKMHEVLLVYKQIEMQFDENGTLIVPDDYKLTITVSYDEKPGIQAISNTAPDLRPTTENGEVYRDAEYK
RLGTLSLLAGIDLLTGEAIPLVSETHKSSDFIEFLKIRDKKYPLQDTIRIILDNHSAHTSKETQRFLDTMPKGRFKFVFT
PKHGSWLNMIESFFSKMTKQMLRGIRVKTKQELEERIYQYFEEVNREPVVYHWKYKMDEIEKKKCCTELWMPFSAH

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46420; Mature: 46420

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAMRRTYLTLSEEDKDYLKTLSKKRTIQAQIVDRAKILLYKSDGMTFNAIAEKLAISSA
CCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHH
TVRLCVSKYYEGGIEKALFDTQRPGRPSEITDDAKAWIINLACQRPVELGYAQELWTLNA
HHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCHHHHHHHHHH
LHKHIQKHAEEAGYPRLTTITKPYIQKFLKEQDIKPFKIRYYCEKRDQDFESKMHEVLLV
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
YKQIEMQFDENGTLIVPDDYKLTITVSYDEKPGIQAISNTAPDLRPTTENGEVYRDAEYK
HHHHHHEECCCCCEEECCCEEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCEEECCHHH
RLGTLSLLAGIDLLTGEAIPLVSETHKSSDFIEFLKIRDKKYPLQDTIRIILDNHSAHTS
HHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHEEEECCCCCCCH
KETQRFLDTMPKGRFKFVFTPKHGSWLNMIESFFSKMTKQMLRGIRVKTKQELEERIYQY
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FEEVNREPVVYHWKYKMDEIEKKKCCTELWMPFSAH
HHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNAMRRTYLTLSEEDKDYLKTLSKKRTIQAQIVDRAKILLYKSDGMTFNAIAEKLAISSA
CCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHH
TVRLCVSKYYEGGIEKALFDTQRPGRPSEITDDAKAWIINLACQRPVELGYAQELWTLNA
HHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCHHHHHHHHHH
LHKHIQKHAEEAGYPRLTTITKPYIQKFLKEQDIKPFKIRYYCEKRDQDFESKMHEVLLV
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
YKQIEMQFDENGTLIVPDDYKLTITVSYDEKPGIQAISNTAPDLRPTTENGEVYRDAEYK
HHHHHHEECCCCCEEECCCEEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCEEECCHHH
RLGTLSLLAGIDLLTGEAIPLVSETHKSSDFIEFLKIRDKKYPLQDTIRIILDNHSAHTS
HHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHEEEECCCCCCCH
KETQRFLDTMPKGRFKFVFTPKHGSWLNMIESFFSKMTKQMLRGIRVKTKQELEERIYQY
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FEEVNREPVVYHWKYKMDEIEKKKCCTELWMPFSAH
HHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA