| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238925549
Identifier: 238925549
GI number: 238925549
Start: 3050200
End: 3050901
Strand: Reverse
Name: 238925549
Synonym: EUBREC_3205
Alternate gene names: NA
Gene position: 3050901-3050200 (Counterclockwise)
Preceding gene: 238925551
Following gene: 238925548
Centisome position: 88.44
GC content: 37.89
Gene sequence:
>702_bases ATGGATAAGAGAAAAATATTCACTGCAATCATGGCAATTTCAATGCTTATAACCACATTTTCAGGCTGCTCGTCAAATCA AAAACAAAGCTACGTCAACCTGGGTAAAGGTGATGAAAGCGATAGACCTGAGGTTGAGGATATAGTGATAGATAATGAAA GTGATATTTATAATATTGGAGATGAAATTCAGGTGAAAAACGTGGATTACGGCACAAATAGAGAATACGTTGCCAAAAGT TATATTGTAAATAGTGTAAAAATATATGATACTGCGGCTGAAATTGATGGTGTGCAGGATAAACTTATAGAAACCGATTA TTATATGGGAGCTGATCCCGAAAAGCCTGCGATACTGAAAAAGGATGAGGTGGCCTGCGGAAAGCTTCTGCTTTGCGATA TATCTGTAAAAAATATCGAGGATGAAATATGCACTGTTGGGGATATTTCCCTGGTATATGAAATTAATGGTGCCTGTCAG CTTTTAGGGTATCCGATTTATTTTTCAAATGCAAAGGACAATGAGCATGGGATATATGATTATACACTGGTGCAGGGGCA GTCGCTTGATGCTCAGATAGGATTTTGTGTAGATCCGGCATTGCTGCAGATTGATAATATGGACTTAAGCAAGCTTTATC TGTCGGTAAACTTTAATGGTGATGAAGAGAACAGGCAGTTTATAGATCTCAGATTGGAGTAG
Upstream 100 bases:
>100_bases GGGCCAAAAGATATACTTAAAAATGCAAGCATGCAAGCATCAAGGATACTTTTGGATTTTTCAATCATTTTATTGAATTA TAAGTGGTAGGAGAAAATTT
Downstream 100 bases:
>100_bases CATATGAAAAATGTATTACAAATTGAGCTTAACAAGGCGATTAAGACCAGATATTTTGCCATATCCATAATCATAGGAAC TATTATTGGCATAGTAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDKRKIFTAIMAISMLITTFSGCSSNQKQSYVNLGKGDESDRPEVEDIVIDNESDIYNIGDEIQVKNVDYGTNREYVAKS YIVNSVKIYDTAAEIDGVQDKLIETDYYMGADPEKPAILKKDEVACGKLLLCDISVKNIEDEICTVGDISLVYEINGACQ LLGYPIYFSNAKDNEHGIYDYTLVQGQSLDAQIGFCVDPALLQIDNMDLSKLYLSVNFNGDEENRQFIDLRLE
Sequences:
>Translated_233_residues MDKRKIFTAIMAISMLITTFSGCSSNQKQSYVNLGKGDESDRPEVEDIVIDNESDIYNIGDEIQVKNVDYGTNREYVAKS YIVNSVKIYDTAAEIDGVQDKLIETDYYMGADPEKPAILKKDEVACGKLLLCDISVKNIEDEICTVGDISLVYEINGACQ LLGYPIYFSNAKDNEHGIYDYTLVQGQSLDAQIGFCVDPALLQIDNMDLSKLYLSVNFNGDEENRQFIDLRLE >Mature_233_residues MDKRKIFTAIMAISMLITTFSGCSSNQKQSYVNLGKGDESDRPEVEDIVIDNESDIYNIGDEIQVKNVDYGTNREYVAKS YIVNSVKIYDTAAEIDGVQDKLIETDYYMGADPEKPAILKKDEVACGKLLLCDISVKNIEDEICTVGDISLVYEINGACQ LLGYPIYFSNAKDNEHGIYDYTLVQGQSLDAQIGFCVDPALLQIDNMDLSKLYLSVNFNGDEENRQFIDLRLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26128; Mature: 26128
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKRKIFTAIMAISMLITTFSGCSSNQKQSYVNLGKGDESDRPEVEDIVIDNESDIYNIG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCEEECC DEIQVKNVDYGTNREYVAKSYIVNSVKIYDTAAEIDGVQDKLIETDYYMGADPEKPAILK CEEEEEECCCCCCHHHHHHHHEEEEEEEEECHHHHCCCHHHHCCCCEEECCCCCCCCEEE KDEVACGKLLLCDISVKNIEDEICTVGDISLVYEINGACQLLGYPIYFSNAKDNEHGIYD CCCCCCCEEEEEEEECCCCCCCCEEECCEEEEEEECCEEEEEEEEEEECCCCCCCCCEEE YTLVQGQSLDAQIGFCVDPALLQIDNMDLSKLYLSVNFNGDEENRQFIDLRLE EEEEECCCCCCEEEEEECCEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MDKRKIFTAIMAISMLITTFSGCSSNQKQSYVNLGKGDESDRPEVEDIVIDNESDIYNIG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCEEECC DEIQVKNVDYGTNREYVAKSYIVNSVKIYDTAAEIDGVQDKLIETDYYMGADPEKPAILK CEEEEEECCCCCCHHHHHHHHEEEEEEEEECHHHHCCCHHHHCCCCEEECCCCCCCCEEE KDEVACGKLLLCDISVKNIEDEICTVGDISLVYEINGACQLLGYPIYFSNAKDNEHGIYD CCCCCCCEEEEEEEECCCCCCCCEEECCEEEEEEECCEEEEEEEEEEECCCCCCCCCEEE YTLVQGQSLDAQIGFCVDPALLQIDNMDLSKLYLSVNFNGDEENRQFIDLRLE EEEEECCCCCCEEEEEECCEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA