| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925368
Identifier: 238925368
GI number: 238925368
Start: 2900156
End: 2901199
Strand: Reverse
Name: 238925368
Synonym: EUBREC_3023
Alternate gene names: NA
Gene position: 2901199-2900156 (Counterclockwise)
Preceding gene: 238925369
Following gene: 238925367
Centisome position: 84.1
GC content: 34.0
Gene sequence:
>1044_bases ATGGCAGAAGAGAAGAAAGAAGAGATTGCAGTAATTGAAATTACAGAAGAGTATATGAAAGAAAGAATTTATGAAATCAG AGGTCAAAGAGTAATCTTAGACTCAGATCTTTCTGAAATATATGGTTATACCACAAAAGCATTCAACCAACAGGTAAAAA ATAATATTGAGAAATTTGATGAAGATTTTATGTTTGAATTAACGGATGATGAGGTAGAAGATTTGCGGTCAAATTTTTTG ACCGCAAATCTTAACAGTAAGAGTAGATATAATCCTCATGTATTTACAGAGCAAGGACTATATATGCTGATGACTGTTTT AAAAGGGCCATTGGCTGTTAAACAGAGTAAGGCATTAATAAGAACCTTCAAAAGAATGAAAGATTACATATTAGAAAATC GTGATTTAATCGGTCAGAGAGAATTACTTCAGTTAAGTATGGAGACTGCAAATAACAGAATTGAAATCAGCAAAATCAAT TCTGATATGATATCTCTTGAAAAACAGATTTCTGATGTTGCAGAAGGATTGAAGGATGTAGTGACGAAATCTGAACTTGC GGATATGATGAACAGTTTTATTTCAGATGATGATGAAAAATGGCTTATGTTTAATGCAAAATTTAGTAGTGCGGATGAGG TTTACGAGTCTATTTACAGGCAGGCAAAGTCATCAATATATGTGGTTGATAATTACATTGGTTTAAGAACGCTGGTACAT CTTAAGAATTCTCCAACAGGAGTAAATATTATTTTATTTAGCGATAATGTTGGGAATAATAAACTTCACAACATAGAATA TACGGATTTCCGTAAGGAATATCCAACTGTAAAACTGTCAATGAAGAAGACTGGTGGCATATTCCATGATCGGTTTATCG TGCTGGATTATGGAACGGCGGATGAGAGAGTCTTTCTGTGTGGTGCTTCTTCCAAGGATGCCGGGGCTAGAATAACAAGC ATTGTTGAGGATTACGGAATAGCCAAATACAACTCTGTTATTGCAGGATTATTGAAAAATTCGGCATTAGTATTACCGAA ATAG
Upstream 100 bases:
>100_bases GGAAAGTGGAAGTTGATGAGTAGATCATTTTTATTGCGTAAAATGGTTGTATGGATTTTGTGGTCACAAATTGTGACCGC AAGACAAGGAAGGAAATCTT
Downstream 100 bases:
>100_bases GAGTGTGAGATTATTGAAGAAGAAAACAAGATGTTACATATATACTCGTGTATGGATAATCTGGATGCTACAGATATTCA TTACGATAAAAAATTTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAEEKKEEIAVIEITEEYMKERIYEIRGQRVILDSDLSEIYGYTTKAFNQQVKNNIEKFDEDFMFELTDDEVEDLRSNFL TANLNSKSRYNPHVFTEQGLYMLMTVLKGPLAVKQSKALIRTFKRMKDYILENRDLIGQRELLQLSMETANNRIEISKIN SDMISLEKQISDVAEGLKDVVTKSELADMMNSFISDDDEKWLMFNAKFSSADEVYESIYRQAKSSIYVVDNYIGLRTLVH LKNSPTGVNIILFSDNVGNNKLHNIEYTDFRKEYPTVKLSMKKTGGIFHDRFIVLDYGTADERVFLCGASSKDAGARITS IVEDYGIAKYNSVIAGLLKNSALVLPK
Sequences:
>Translated_347_residues MAEEKKEEIAVIEITEEYMKERIYEIRGQRVILDSDLSEIYGYTTKAFNQQVKNNIEKFDEDFMFELTDDEVEDLRSNFL TANLNSKSRYNPHVFTEQGLYMLMTVLKGPLAVKQSKALIRTFKRMKDYILENRDLIGQRELLQLSMETANNRIEISKIN SDMISLEKQISDVAEGLKDVVTKSELADMMNSFISDDDEKWLMFNAKFSSADEVYESIYRQAKSSIYVVDNYIGLRTLVH LKNSPTGVNIILFSDNVGNNKLHNIEYTDFRKEYPTVKLSMKKTGGIFHDRFIVLDYGTADERVFLCGASSKDAGARITS IVEDYGIAKYNSVIAGLLKNSALVLPK >Mature_346_residues AEEKKEEIAVIEITEEYMKERIYEIRGQRVILDSDLSEIYGYTTKAFNQQVKNNIEKFDEDFMFELTDDEVEDLRSNFLT ANLNSKSRYNPHVFTEQGLYMLMTVLKGPLAVKQSKALIRTFKRMKDYILENRDLIGQRELLQLSMETANNRIEISKINS DMISLEKQISDVAEGLKDVVTKSELADMMNSFISDDDEKWLMFNAKFSSADEVYESIYRQAKSSIYVVDNYIGLRTLVHL KNSPTGVNIILFSDNVGNNKLHNIEYTDFRKEYPTVKLSMKKTGGIFHDRFIVLDYGTADERVFLCGASSKDAGARITSI VEDYGIAKYNSVIAGLLKNSALVLPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39782; Mature: 39651
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEKKEEIAVIEITEEYMKERIYEIRGQRVILDSDLSEIYGYTTKAFNQQVKNNIEKFD CCCCCHHCEEEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHCC EDFMFELTDDEVEDLRSNFLTANLNSKSRYNPHVFTEQGLYMLMTVLKGPLAVKQSKALI HHHEEEECCHHHHHHHHHCEEEECCCCCCCCCCEECCCCHHHHHHHHCCCHHHHHHHHHH RTFKRMKDYILENRDLIGQRELLQLSMETANNRIEISKINSDMISLEKQISDVAEGLKDV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH VTKSELADMMNSFISDDDEKWLMFNAKFSSADEVYESIYRQAKSSIYVVDNYIGLRTLVH HHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHEE LKNSPTGVNIILFSDNVGNNKLHNIEYTDFRKEYPTVKLSMKKTGGIFHDRFIVLDYGTA ECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCEEEEEEHHCCCEEECEEEEEEECCC DERVFLCGASSKDAGARITSIVEDYGIAKYNSVIAGLLKNSALVLPK CCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure AEEKKEEIAVIEITEEYMKERIYEIRGQRVILDSDLSEIYGYTTKAFNQQVKNNIEKFD CCCCHHCEEEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHCC EDFMFELTDDEVEDLRSNFLTANLNSKSRYNPHVFTEQGLYMLMTVLKGPLAVKQSKALI HHHEEEECCHHHHHHHHHCEEEECCCCCCCCCCEECCCCHHHHHHHHCCCHHHHHHHHHH RTFKRMKDYILENRDLIGQRELLQLSMETANNRIEISKINSDMISLEKQISDVAEGLKDV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH VTKSELADMMNSFISDDDEKWLMFNAKFSSADEVYESIYRQAKSSIYVVDNYIGLRTLVH HHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHEE LKNSPTGVNIILFSDNVGNNKLHNIEYTDFRKEYPTVKLSMKKTGGIFHDRFIVLDYGTA ECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCEEEEEEHHCCCEEECEEEEEEECCC DERVFLCGASSKDAGARITSIVEDYGIAKYNSVIAGLLKNSALVLPK CCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA