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The map label for this gene is sufB [C]

Identifier: 238925332

GI number: 238925332

Start: 2867516

End: 2868442

Strand: Reverse

Name: sufB [C]

Synonym: EUBREC_2987

Alternate gene names: 238925332

Gene position: 2868442-2867516 (Counterclockwise)

Preceding gene: 238925333

Following gene: 238925331

Centisome position: 83.15

GC content: 46.49

Gene sequence:

>927_bases
ATGGTAAAGCTTGACAACGTAACAGAGGGCGTATTGGACGTCATAAATGATAATAAATTCAGTCAGACCGGTGCCTTTAA
TCTGCGTGAAAACGGCACATCAATCTGCCACGGAGACAGCGAGCACATCAAGATAAAGAAAAAGACGGACAAGCCCGGCA
TTGATATTTATATTGATGGAAAGACGGACGGAGAGGCTGTCTATATCCCTGTAGTACTCAGCAAATCAGGTATGACAGAC
CTTGTATACAATGATTTCTATGTGGAGGATGGCGCAGATGTAAGGATTGTGGCAGGCTGCGGAATCCACAACAGCGGCTG
CAACGAGAGCAGACACGACGGCATCCATACCTTCCATGTAGGCAAAAATGCGAATGTACGATATGAGGAAAAGCACTACG
GCGAGGGAAACGGAACAGGTGCGAGAGTGCTCAACCCTGTAACAAATATATTTGTGGGTGAGAATTCTGTTTTCACTCTC
GATACAGCACAGATAAAGGGTGTTGATTCTACAGTCCGTGAGACCAATGTGGAGCTTGGAAAGGACGCAAAGCTCTATGT
CACAGAGCGTCTCATGACAGATGGAGAGCAGAAGGCGGAGTCAAATATCGAGGTGCAGTTAAACGGAGAGGACAGCTCTG
CACAGATTGTTTCCAGATCCGTAGGAAAAGGTAACTCAGTCCAGACCTTCCATCCGAATGCCATCGGCAACAGCAAATGC
CAGGCTCATATCCAGTGTGATTCTATCATCATGGATCATGCAGAGGTCGGTTCAATCCCTGAAATCAGGGCAAAAAATAT
CGATGCGGCTATCATACATGAGGCAGCAATCGGCAGGATAAATGACGAGCAGCTTCTCAAGCTCCGTACACTCGGACTTA
CAGAGGAAGAGGCAGAGGAAGTTATCATACAGAATTTCTTAAACTAA

Upstream 100 bases:

>100_bases
GAAATCAAGAAAATCGGCACAAAGGACGAGGTGCTGCCTTATCTCAATGGTGTACAGAAATGTCACAAATGCGTAGAGAG
ACTGGAGGGAAGAGCATAAT

Downstream 100 bases:

>100_bases
ATCAGGCGTAAATAGAAACCCCGGAGCGAGATATTGATATGCTATCAAAGCATACAATACGCTCCGGGGTTTATTTTATG
TTACTGTTCATGCCTGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MVKLDNVTEGVLDVINDNKFSQTGAFNLRENGTSICHGDSEHIKIKKKTDKPGIDIYIDGKTDGEAVYIPVVLSKSGMTD
LVYNDFYVEDGADVRIVAGCGIHNSGCNESRHDGIHTFHVGKNANVRYEEKHYGEGNGTGARVLNPVTNIFVGENSVFTL
DTAQIKGVDSTVRETNVELGKDAKLYVTERLMTDGEQKAESNIEVQLNGEDSSAQIVSRSVGKGNSVQTFHPNAIGNSKC
QAHIQCDSIIMDHAEVGSIPEIRAKNIDAAIIHEAAIGRINDEQLLKLRTLGLTEEEAEEVIIQNFLN

Sequences:

>Translated_308_residues
MVKLDNVTEGVLDVINDNKFSQTGAFNLRENGTSICHGDSEHIKIKKKTDKPGIDIYIDGKTDGEAVYIPVVLSKSGMTD
LVYNDFYVEDGADVRIVAGCGIHNSGCNESRHDGIHTFHVGKNANVRYEEKHYGEGNGTGARVLNPVTNIFVGENSVFTL
DTAQIKGVDSTVRETNVELGKDAKLYVTERLMTDGEQKAESNIEVQLNGEDSSAQIVSRSVGKGNSVQTFHPNAIGNSKC
QAHIQCDSIIMDHAEVGSIPEIRAKNIDAAIIHEAAIGRINDEQLLKLRTLGLTEEEAEEVIIQNFLN
>Mature_308_residues
MVKLDNVTEGVLDVINDNKFSQTGAFNLRENGTSICHGDSEHIKIKKKTDKPGIDIYIDGKTDGEAVYIPVVLSKSGMTD
LVYNDFYVEDGADVRIVAGCGIHNSGCNESRHDGIHTFHVGKNANVRYEEKHYGEGNGTGARVLNPVTNIFVGENSVFTL
DTAQIKGVDSTVRETNVELGKDAKLYVTERLMTDGEQKAESNIEVQLNGEDSSAQIVSRSVGKGNSVQTFHPNAIGNSKC
QAHIQCDSIIMDHAEVGSIPEIRAKNIDAAIIHEAAIGRINDEQLLKLRTLGLTEEEAEEVIIQNFLN

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 33596; Mature: 33596

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLDNVTEGVLDVINDNKFSQTGAFNLRENGTSICHGDSEHIKIKKKTDKPGIDIYIDG
CEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCCEEEEEECCCCCCEEEEECC
KTDGEAVYIPVVLSKSGMTDLVYNDFYVEDGADVRIVAGCGIHNSGCNESRHDGIHTFHV
CCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEE
GKNANVRYEEKHYGEGNGTGARVLNPVTNIFVGENSVFTLDTAQIKGVDSTVRETNVELG
CCCCCEEEHHHCCCCCCCCCHHEECCCCEEEECCCCEEEEECCEECCCCHHHHHCCCCCC
KDAKLYVTERLMTDGEQKAESNIEVQLNGEDSSAQIVSRSVGKGNSVQTFHPNAIGNSKC
CCCEEEEEEHHHCCCCHHCCCCCEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCE
QAHIQCDSIIMDHAEVGSIPEIRAKNIDAAIIHEAAIGRINDEQLLKLRTLGLTEEEAEE
EEEEEEEEEEECCHHCCCCCCHHHCCCCCEEEEHHHHCCCCHHHEEEEHCCCCCHHHHHH
VIIQNFLN
HHHHHHCC
>Mature Secondary Structure
MVKLDNVTEGVLDVINDNKFSQTGAFNLRENGTSICHGDSEHIKIKKKTDKPGIDIYIDG
CEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCCEEEEEECCCCCCEEEEECC
KTDGEAVYIPVVLSKSGMTDLVYNDFYVEDGADVRIVAGCGIHNSGCNESRHDGIHTFHV
CCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEE
GKNANVRYEEKHYGEGNGTGARVLNPVTNIFVGENSVFTLDTAQIKGVDSTVRETNVELG
CCCCCEEEHHHCCCCCCCCCHHEECCCCEEEECCCCEEEEECCEECCCCHHHHHCCCCCC
KDAKLYVTERLMTDGEQKAESNIEVQLNGEDSSAQIVSRSVGKGNSVQTFHPNAIGNSKC
CCCEEEEEEHHHCCCCHHCCCCCEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCE
QAHIQCDSIIMDHAEVGSIPEIRAKNIDAAIIHEAAIGRINDEQLLKLRTLGLTEEEAEE
EEEEEEEEEEECCHHCCCCCCHHHCCCCCEEEEHHHHCCCCHHHEEEEHCCCCCHHHHHH
VIIQNFLN
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]