Click here to switch to the map view.

The map label for this gene is 238925329

Identifier: 238925329

GI number: 238925329

Start: 2865227

End: 2866138

Strand: Reverse

Name: 238925329

Synonym: EUBREC_2984

Alternate gene names: NA

Gene position: 2866138-2865227 (Counterclockwise)

Preceding gene: 238925330

Following gene: 238925328

Centisome position: 83.08

GC content: 41.56

Gene sequence:

>912_bases
ATGAAAGCGTATTATCATCTACCGGGATTGTTTGAATTTTATGAATTATACAAAGAATTTCTCCCACTGTACCGCAAGCA
CCGGGAATATTTCTATGACTGGTGCGACATAGGCTCAATATACGGTGCACCGGCAGACTGCATATGGGGCGGAGGCCGCG
TCGGTTTTGGTGAGCACGATTTGAAGGAAGTGCTTAAGCTGATGCAGGAATATGGGATATCCGCGAGACTTACCTTTAGC
AATTCATTGCTTACTAAGGAGCATCTTCCTGACAAAAAATGTAACGAACTGTGCAGGATATTTGATATAGGCAGAGATAA
TGAGCGAAGCAGGGGCTTTGGAAACGGCATAATCATCTACTCAGATATTCTGCTTGATTACATAAAAGAAAACTACCCTG
ACTTTTATTTTGTGTCTTCAACCACAAAGGTTCTGACGGATTTCAGTGAATTTAAAAATGAGCTAAACAGAGAGGAATTT
CGCTATGTAGTACCGGATTTCAGGTTGAACAAATCATTTGACAATCTGAAAGCACTATCACAGCATCAAAAGGAAAAAGT
AGAATTTTTGTGCAATGAGTGCTGCTGGTTTGGCTGCACGGACAGGAAGAAATGCTACGAGACGGTTAGCCGCAAAAATC
TGGGAGTGGATTGCCCGGAGCATTATTGCGTGGCGCCTGATTCGGGGCAGGGATATCTTTTTTCGAAGGCGATGGAAAAT
CCGGGATTTATAGGAGTATATGATATAAAGAACACTTATCTGCCGATGGGCTTTAGCAATTTTAAAATAGAGGGCAGAGG
GCTTGGAAGTGCCATGATACTTGAATTTCTGCTTTATTATATGACGAAGCCACAGTATCAGATACATGTCAGAGAGCACA
TTTATCTCGATAATATGCTGGATTTATTTTGA

Upstream 100 bases:

>100_bases
ACGGGGATATGTGTATTTTACGCTGCCGCTTTTTGAGGAATATGTGATTGAAAATTATTAAAATGAGCACAGGTTCAGCA
GATTAAAATAAGGAGTCAAA

Downstream 100 bases:

>100_bases
AATATAAAAACTATACATTAACGACAACAGGAAGGATGATTCTCAAAAATGAATATTAGAAGAGCACACGAAAAAGACAT
ACCAAGACTTATAGAATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKAYYHLPGLFEFYELYKEFLPLYRKHREYFYDWCDIGSIYGAPADCIWGGGRVGFGEHDLKEVLKLMQEYGISARLTFS
NSLLTKEHLPDKKCNELCRIFDIGRDNERSRGFGNGIIIYSDILLDYIKENYPDFYFVSSTTKVLTDFSEFKNELNREEF
RYVVPDFRLNKSFDNLKALSQHQKEKVEFLCNECCWFGCTDRKKCYETVSRKNLGVDCPEHYCVAPDSGQGYLFSKAMEN
PGFIGVYDIKNTYLPMGFSNFKIEGRGLGSAMILEFLLYYMTKPQYQIHVREHIYLDNMLDLF

Sequences:

>Translated_303_residues
MKAYYHLPGLFEFYELYKEFLPLYRKHREYFYDWCDIGSIYGAPADCIWGGGRVGFGEHDLKEVLKLMQEYGISARLTFS
NSLLTKEHLPDKKCNELCRIFDIGRDNERSRGFGNGIIIYSDILLDYIKENYPDFYFVSSTTKVLTDFSEFKNELNREEF
RYVVPDFRLNKSFDNLKALSQHQKEKVEFLCNECCWFGCTDRKKCYETVSRKNLGVDCPEHYCVAPDSGQGYLFSKAMEN
PGFIGVYDIKNTYLPMGFSNFKIEGRGLGSAMILEFLLYYMTKPQYQIHVREHIYLDNMLDLF
>Mature_303_residues
MKAYYHLPGLFEFYELYKEFLPLYRKHREYFYDWCDIGSIYGAPADCIWGGGRVGFGEHDLKEVLKLMQEYGISARLTFS
NSLLTKEHLPDKKCNELCRIFDIGRDNERSRGFGNGIIIYSDILLDYIKENYPDFYFVSSTTKVLTDFSEFKNELNREEF
RYVVPDFRLNKSFDNLKALSQHQKEKVEFLCNECCWFGCTDRKKCYETVSRKNLGVDCPEHYCVAPDSGQGYLFSKAMEN
PGFIGVYDIKNTYLPMGFSNFKIEGRGLGSAMILEFLLYYMTKPQYQIHVREHIYLDNMLDLF

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35667; Mature: 35667

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAYYHLPGLFEFYELYKEFLPLYRKHREYFYDWCDIGSIYGAPADCIWGGGRVGFGEHD
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCCCCCHHH
LKEVLKLMQEYGISARLTFSNSLLTKEHLPDKKCNELCRIFDIGRDNERSRGFGNGIIIY
HHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEH
SDILLDYIKENYPDFYFVSSTTKVLTDFSEFKNELNREEFRYVVPDFRLNKSFDNLKALS
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCHHHHEEECCCCEECCCHHHHHHHH
QHQKEKVEFLCNECCWFGCTDRKKCYETVSRKNLGVDCPEHYCVAPDSGQGYLFSKAMEN
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEHHHCCC
PGFIGVYDIKNTYLPMGFSNFKIEGRGLGSAMILEFLLYYMTKPQYQIHVREHIYLDNML
CCEEEEEECCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
DLF
HCC
>Mature Secondary Structure
MKAYYHLPGLFEFYELYKEFLPLYRKHREYFYDWCDIGSIYGAPADCIWGGGRVGFGEHD
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCCCCCCHHH
LKEVLKLMQEYGISARLTFSNSLLTKEHLPDKKCNELCRIFDIGRDNERSRGFGNGIIIY
HHHHHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEH
SDILLDYIKENYPDFYFVSSTTKVLTDFSEFKNELNREEFRYVVPDFRLNKSFDNLKALS
HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCHHHHEEECCCCEECCCHHHHHHHH
QHQKEKVEFLCNECCWFGCTDRKKCYETVSRKNLGVDCPEHYCVAPDSGQGYLFSKAMEN
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEHHHCCC
PGFIGVYDIKNTYLPMGFSNFKIEGRGLGSAMILEFLLYYMTKPQYQIHVREHIYLDNML
CCEEEEEECCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
DLF
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA