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The map label for this gene is ziaR [H]

Identifier: 238925312

GI number: 238925312

Start: 2851411

End: 2851779

Strand: Reverse

Name: ziaR [H]

Synonym: EUBREC_2967

Alternate gene names: 238925312

Gene position: 2851779-2851411 (Counterclockwise)

Preceding gene: 238925313

Following gene: 238925311

Centisome position: 82.67

GC content: 44.72

Gene sequence:

>369_bases
ATGAGCGAAAACATAAATGAACAGATAGAATGCTGCGACTGCAACGAAATCCACGAAGATCTTCTGAAAATAGTAAATGA
TACAATGCCGGAGGAAACCGAGCTCTACGACCTTGCAGAGCTTTTTAAGGTATTTGGCGACTCCACCAGAATCAGAATCC
TCTTTGTGTTGTTTGAAGCGGAGGTATGCGTCTGCGACCTTGCAAAGGTGCTCAACATGACACAGTCCGCCATATCACAC
CAGCTTAGAATATTAAAGGCAAACAAGCTCGTAAACAGCAGACGTGAGGGAAAATCAGTGTTTTATTCACTTGCCGACGG
ACATGTGCGCACAATCATTGCGCAGGGACGTGAGCATATCGAAGAATAA

Upstream 100 bases:

>100_bases
CGAAATACTGAGCGAAGGCACATGCAATTTATGCGGAGCACCCGCCCCATAGCCAAAAAGTAAATATAACGCAAAAATAG
CGCAGAAAGGACACCACACC

Downstream 100 bases:

>100_bases
TACAGGGAGGAATATACGTGACAGAATTAGAAGAATACTATAACAAATTTAACGAGGAAAAGCGCCTGAACAGCCGCCAC
GGCAGGGTAGAGTTTATCAC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSENINEQIECCDCNEIHEDLLKIVNDTMPEETELYDLAELFKVFGDSTRIRILFVLFEAEVCVCDLAKVLNMTQSAISH
QLRILKANKLVNSRREGKSVFYSLADGHVRTIIAQGREHIEE

Sequences:

>Translated_122_residues
MSENINEQIECCDCNEIHEDLLKIVNDTMPEETELYDLAELFKVFGDSTRIRILFVLFEAEVCVCDLAKVLNMTQSAISH
QLRILKANKLVNSRREGKSVFYSLADGHVRTIIAQGREHIEE
>Mature_121_residues
SENINEQIECCDCNEIHEDLLKIVNDTMPEETELYDLAELFKVFGDSTRIRILFVLFEAEVCVCDLAKVLNMTQSAISHQ
LRILKANKLVNSRREGKSVFYSLADGHVRTIIAQGREHIEE

Specific function: Transcriptional repressor of the expression of the ziaA gene. Controls zinc homeostasis by triggering ziaA-mediated efflux of excess zinc into the periplasm [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 14000; Mature: 13869

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENINEQIECCDCNEIHEDLLKIVNDTMPEETELYDLAELFKVFGDSTRIRILFVLFEA
CCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHEEEEEHHHH
EVCVCDLAKVLNMTQSAISHQLRILKANKLVNSRREGKSVFYSLADGHVRTIIAQGREHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
EE
CC
>Mature Secondary Structure 
SENINEQIECCDCNEIHEDLLKIVNDTMPEETELYDLAELFKVFGDSTRIRILFVLFEA
CCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHEEEEEHHHH
EVCVCDLAKVLNMTQSAISHQLRILKANKLVNSRREGKSVFYSLADGHVRTIIAQGREHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9724772 [H]