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The map label for this gene is yesN [H]

Identifier: 238925233

GI number: 238925233

Start: 2766330

End: 2767340

Strand: Reverse

Name: yesN [H]

Synonym: EUBREC_2887

Alternate gene names: 238925233

Gene position: 2767340-2766330 (Counterclockwise)

Preceding gene: 238925234

Following gene: 238925232

Centisome position: 80.22

GC content: 39.07

Gene sequence:

>1011_bases
ATGAAAGTATTAGTTGTTGACGATGATAAACTGGCAAGAAAAGGTTTGATCTCCATAATGGATTGGAAGAAATACGGATT
TGAAGTTGTGGGGGATGTTCAGAACGGTCGTAAAGCGCTGGAATTTCTGAAGGATAATGAAGTGGATATTGTATTCACGG
ATATAGACATGCCGGAGATCGATGGAATTGAATTGATGAAAATGTGTAAAAAGGAATATCCGGAGGTGAAATTTGTAGTC
TTTTCCATGTATGAAGATTTCCGTTATGCGCAGAGTGCTCTGAGACTGGGAGCTTTGGACTATATATCCAAGATAAGTTT
TGAAGGGGATGAGTGTGACCGGATACTGGAACTTGTGGAAAGAAAATATAAGGAAAATCATTCCCAAAAAGAAACCAGGA
ATGAGGATTCCGAACTCATAAAAAGGTTGGAAAAAGCGTGGATGAACACCAGATGGATCTTCAATGACAGCGAGTTCAAC
AGACTGTATGAGTTAACCAGGGGAGTGGAGTTACGGACTGCTGAAAGGGTTTTCATAAAAAGCTTCCACAGCCTCCAGAA
ACTCACAGGAGAAGAACTGGAATTTCCATCCTTATCTTCCGTGGATTCCATGCTGGAATGGGTGAAACAATGGAAAGAAA
ACCTGTATCAGACATGTCTGCAGACAGATAAAACAAAGGATATCTATATGTTTGCAAGAGTGATCCTGTATACAGATGAA
CATATAGAAGAAAATCTGAAGTCGGAAGAGGCAGCAGCACAGATCGGAATGAGCAGAAGTTATTTCAGTACGAGATTTAA
GGAGATGACCGGTGATACCTTTCATAATTATGTGATCAGCAGAAAAATGTATGCAGCTGCCCAAAAGATGGCAAAAGGAA
CAGAAAATATAACACAGATTGCCTCGAATCTGGGCTATGACAATTTTTATTATTTTACAAAGGTATTTTCGAAGGAATAC
GGATGCATGCCAACAGAATATGTAGGAAGAATAAAAAAATGTTCGATTTAA

Upstream 100 bases:

>100_bases
GATATGGAACCAAAATTACAATTTTGATTCCGATTCAGGAAGAACTTCGGAACAAAATAAAAATTACAGGAGTTGAGACA
GAAAAAGAAGGTAAGGAGAA

Downstream 100 bases:

>100_bases
TTCGGACATTTTTTTTGAATTAAAAAAAAAGCTGTGAAATCAGGAACAATATCGTCTAGTGAAAAATATGGTTACAGGAT
AAACTATCTATAAAAGAAGG

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKVLVVDDDKLARKGLISIMDWKKYGFEVVGDVQNGRKALEFLKDNEVDIVFTDIDMPEIDGIELMKMCKKEYPEVKFVV
FSMYEDFRYAQSALRLGALDYISKISFEGDECDRILELVERKYKENHSQKETRNEDSELIKRLEKAWMNTRWIFNDSEFN
RLYELTRGVELRTAERVFIKSFHSLQKLTGEELEFPSLSSVDSMLEWVKQWKENLYQTCLQTDKTKDIYMFARVILYTDE
HIEENLKSEEAAAQIGMSRSYFSTRFKEMTGDTFHNYVISRKMYAAAQKMAKGTENITQIASNLGYDNFYYFTKVFSKEY
GCMPTEYVGRIKKCSI

Sequences:

>Translated_336_residues
MKVLVVDDDKLARKGLISIMDWKKYGFEVVGDVQNGRKALEFLKDNEVDIVFTDIDMPEIDGIELMKMCKKEYPEVKFVV
FSMYEDFRYAQSALRLGALDYISKISFEGDECDRILELVERKYKENHSQKETRNEDSELIKRLEKAWMNTRWIFNDSEFN
RLYELTRGVELRTAERVFIKSFHSLQKLTGEELEFPSLSSVDSMLEWVKQWKENLYQTCLQTDKTKDIYMFARVILYTDE
HIEENLKSEEAAAQIGMSRSYFSTRFKEMTGDTFHNYVISRKMYAAAQKMAKGTENITQIASNLGYDNFYYFTKVFSKEY
GCMPTEYVGRIKKCSI
>Mature_336_residues
MKVLVVDDDKLARKGLISIMDWKKYGFEVVGDVQNGRKALEFLKDNEVDIVFTDIDMPEIDGIELMKMCKKEYPEVKFVV
FSMYEDFRYAQSALRLGALDYISKISFEGDECDRILELVERKYKENHSQKETRNEDSELIKRLEKAWMNTRWIFNDSEFN
RLYELTRGVELRTAERVFIKSFHSLQKLTGEELEFPSLSSVDSMLEWVKQWKENLYQTCLQTDKTKDIYMFARVILYTDE
HIEENLKSEEAAAQIGMSRSYFSTRFKEMTGDTFHNYVISRKMYAAAQKMAKGTENITQIASNLGYDNFYYFTKVFSKEY
GCMPTEYVGRIKKCSI

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=146, Percent_Identity=32.8767123287671, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790299, Length=101, Percent_Identity=34.6534653465347, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788222, Length=104, Percent_Identity=31.7307692307692, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 39630; Mature: 39630

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVVDDDKLARKGLISIMDWKKYGFEVVGDVQNGRKALEFLKDNEVDIVFTDIDMPEI
CEEEEECCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCC
DGIELMKMCKKEYPEVKFVVFSMYEDFRYAQSALRLGALDYISKISFEGDECDRILELVE
CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RKYKENHSQKETRNEDSELIKRLEKAWMNTRWIFNDSEFNRLYELTRGVELRTAERVFIK
HHHHHCCCHHHHCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHH
SFHSLQKLTGEELEFPSLSSVDSMLEWVKQWKENLYQTCLQTDKTKDIYMFARVILYTDE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HIEENLKSEEAAAQIGMSRSYFSTRFKEMTGDTFHNYVISRKMYAAAQKMAKGTENITQI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ASNLGYDNFYYFTKVFSKEYGCMPTEYVGRIKKCSI
HHHCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHCCC
>Mature Secondary Structure
MKVLVVDDDKLARKGLISIMDWKKYGFEVVGDVQNGRKALEFLKDNEVDIVFTDIDMPEI
CEEEEECCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCC
DGIELMKMCKKEYPEVKFVVFSMYEDFRYAQSALRLGALDYISKISFEGDECDRILELVE
CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RKYKENHSQKETRNEDSELIKRLEKAWMNTRWIFNDSEFNRLYELTRGVELRTAERVFIK
HHHHHCCCHHHHCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHH
SFHSLQKLTGEELEFPSLSSVDSMLEWVKQWKENLYQTCLQTDKTKDIYMFARVILYTDE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HIEENLKSEEAAAQIGMSRSYFSTRFKEMTGDTFHNYVISRKMYAAAQKMAKGTENITQI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ASNLGYDNFYYFTKVFSKEYGCMPTEYVGRIKKCSI
HHHCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]